Lag0025068 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0025068
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	40S ribosomal protein S14
Location	chr10: 8253824 .. 8260066 (-)
RNA-Seq Expression	Lag0025068
Synteny	Lag0025068

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTAGATCTAATCTGTTTGCGAATCACAGGCTTACTGGTCGACTCGTTCATTTACGGTTGTCGTTGTTTTTTCCGATCACCATGCCAATGATGGATGGTCTGTTCGGGATTTGTGACAAAGTGCTTTGAATCTCTTTTGTTCACACCGTGAATATCGTCATGAGATTTTCTCGCCGCTGTTCCAAAATTTGTTGCAAATAGAAGTATGAAATCCCGAGTTTGATAGGGTGTATGATTAGTTTGCTCCTCATTATCAGGAAGTCTGTGTATGTTAGTCGATGAAGTACTATGGATTAATGGTTTTACTTAGTTATTTAGATTGCTTGAAGGCTGCTCTGTCATGGTTGAAATTTAGGGTTCTGTAACTCGGTGAGACTTATTAGGTTGGGAGTAAATTTGGGCTTTTAAGCTGTGTGGTTTGCTGTCCACTGTTTATAATGTGTGCCTCTAGTGTCTACTCTGTTTGCTTGGCAGAGCCAGAGAAGACCTATATTTGTTTCTTAGGTTTTTGTTTATTTGTAATGTTTGCTATCTGATTCTTCTCAACCCTTTTGTATTTACTCAATGAATGGCGTTAAGCTGACTCCATTGTTGTTTCTTTGTGTCTCACTATAGAAAGTTATCAGCCTTAGCTTAATCATAATCTCTTTAATATAGGAATCTTTAATTTGCTTTCGTTTTTGTTTTGGATTCTATAGTCTGGCTCAAGGAGGAAGACCAGGGAACCCAAGGAAGAAACTGTGACTCTTGGACCTTCTGTGAGGGAAGGCGAGCATGTTTTTGGCGTAGCTCACATTTTTGCCTCATTTAATGATACATTTATTGTAAGTGAAAACATGCACATAATTTGATTGCTGCACATTGAGTAACAGAATGATGACTTTGTTGTTTCAACTGCAGCATGTGACTGATCTTTCTGGGAGGGAAACCCTCGTCCGTATCACAGGTGAAACAATCAAATAGTTTCCTTTTCTTAAACTCTTAAATTGAAGTGTTTGAAATTATAAATTCGGGATGATGTATTTGCATAGATAGCCCGTGTAATTGAAATAATATTGTTGAAAGCCATTAATTCAAGGTCTAGTACAGCATAGTACTTCAACCTTGATTTTCATTGAACGAAAAGCTTCTGCATTTATGAATACGATATATGGTATTAATTTATTTATAATTGTCTGTTAATCTCTCTATGCTCACCTCAGAATTCTCTAACGGTGCCTGTGAGGGTTTTTCTTTTGAAAATCACGTGAGGTCTTTTTCTTGCATGCGGAAGTCTGACCACAGTGATTTGTTGGTGTTAGTGGCCGTTTAAGTGTATATTGTCATATATAAGTAATAAGGGCGAGGAAGTGATCCTTGATAGAAGAAATAGTCGTGCTGTTGTTTCTTCTTTGTTTTTGCGTAGACATAAAAGAAGCCTAATTCTGTGTTGTGATGAACTTAGGTGGGATGAAGGTGAAAGCTGACAGGGATGAGTCCTCTCCATACGCAGCTATGCTTGCAGCACAGGATGTTTCTCAGAGATGCAAGGTTCCATCCTCTGTTTATATTCTTTCTTAATTTGCTTTTTCTCCATTTGTTTTTCATGGATTGTAACTGGTTCTGAATGTTCCAATTTTCTGGATTTCATATTTACTGTTCATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTGCCACTGAACTCTATTACTTCACTGTGGCTCTATTTTTTTTTACAAAAAGGAACTCGGTATCACTGCCCTTCATATTAAACTGCGTGCTACGGGAGGAAACAAGACCAAAACGCCTGGCCCAGGTGCCCAGTCTGCACTCCGTGCTCTTGCTCGTTCTGGAATGAGAATTGGTCGCATAGGTGAAACCTTTGTCTCCATATCATTGATAAATTCAGAACAAAATACACACATACATGAAAGCTGCACATTCAACTTCACTTTTAAACTGCATTTTTCCGTATGCTGTATTAGTTGTTGGAAATCTAATTACCATTTGCTTTTTGATATGTTCCAGAGGACGTGACTCCAATTCCAACAGACAGCACTCGCAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAAGCTTGCTTCCGGCTTCCTCCGTTATGGCTATGTCAGTGGCTGTTCTATGGTTCTGATGCTCTCCTTAAAATCTTGCTCCCTTAGTTTTTCAGAACTCCAACTTGTCTTTGATTATTGCTCTGTCAGGGATGTTTTTTTGTCTTCGATTTTGTTTTATGTAGAACCGAGACTATGAAAGAGGAATTTTTGCCTTTAGTTTAACAAATTAATACGATGCCTTTTGGTCTTATTATTGGTAAAAAAGTGTGGTCGATGATGTGCCATGAAATATTTATATAACGTTTTGTTAAGTTGATAGGCCAAGAAGTTGAGTTAAAAAATCCTTGTGATCACTATCACTATTGGTGTGTTTCTGTTTTATATTTTTTTGTTCTTTTTTTTGTCTTGACAACTGTGGGGCGAGGGATTTGGGATTCGAACGTGTTGGCAAACCACTGACAATTTTATACTCCATTCTTTACATTTTCTTATACTTCTGTTGAATGCCCATCGATGTACTAAATGACATTTTGTTCGTGGAGCTTGGGCGTTTGAAATATATTTTTTTAAACAATATGTAGGGTGGGCATTTGAATTACAAACCTTTTGGTTATTAGTACAACTTTATGGAGTTGAGCTATGTTTTTGTTGGTTCAGTTATTTAATAGTTGGAGAATGTAAATTGTGGATCCGTTTTGTAATCAATGGGGTTACATTGTTTTACATTGTTTTAATTTTATTTTGGTTTAGATTTGACTAGGAATGTAACGAAGTTTGGACAAACAAATGCAAACATGTCTAGTATTATAGTTACTAATGGTAATTAGGGATTGAATTTGTTGTTTAATCTAATAAGTAATGCAAATATGTCTAGTATTGGTTACTAATTGAGATTAGGGATTAAATTTGTAATTTACATGGTTTAGAGTTGTATCTTTCAAAATAATTAATGTGAACGTTATCATTAGAAGTAAATGGTAAATTTCAATTTTAAACATTGAAGGTAAGTTACAATGTTTGTGAATTAGGTTTAAGCATTGGACTATATTAATATGGATAATTGTAATGGGTGGCAACATGAAGGTAAATAATTACAAATATAGCAATTTTTAAAAATATTTACAAATATGGCAAATTTTTTGAATTAATTTTTTATATTCTTAAATTGCCCCTGTGTGCCTATCTTCTTCTTCCTCGTCAGTTTTTTATTATTTTTTTTATTATTTTTTTTACTGATAGAAAATCTTTTTATTACTGATAGATTCTATCAGTGGTAGAAAAATTTTCTATCAGTGATAGAAAGTTTCTATCACTGATAGAATAAACTTTTTATAGAAAATCATAGAAAAACTTTTGATAAAAAATCTTTCAATCCCTGATCACCCATAAAAATCTTTCTATCTCCGATAGTATAATCTATAAGTGATAGAAAAACTTTCTATCAGTGATAAAAGATTTCTATCATTGATAGAAAACTCTTGATAGAAAATCTTTCAATCCCTGATAGAACCTATCAGTGATAGAAATATTCTATCACTTATAGAAATTTTTTGAGTGATAGAAAAAATTTTATCATTCATAGAAAATCTTTCTATGAGTGATAGAAAAACTTTCTATCTCTATCACTGAGACTGATAGAAAAATTTTTCGTGAGTTATAGAAAATCTTTCTACCACTGATACTTTTCTATCAGTGATGGAAGATCTTTTGTTTCTACCACTGATACTTTTCTATCAGTGATGGAAGATCTTTTGTTTCTATCAGCGATGGTGATACATGGTGAAATCGAACATTGAAAAATAAAGCAAAAACGAACGATTATAGAAATCAAACACTGAAAAGCAAAAACCAAACACTGATAGAAAACCAAATAACAACAACCAAACACTGATAGAACACCGAACAAGTGATAGAAAAATATCTATAGAATCTATCAGTAGTAGAAAAATTTTCTATCATATGATAGAATCTATCAGTGAAAGAAAATGTCTATCACTGATAGAAAATCTTTCTATCACTGATAGAACCTATCAGTGATAGAAAAACTTTCTATCAGTGAAAAAAAATCTGGAGGGGTATTTTAGTAAATGCAACACACAAATTATTAGATTTTGCCATTTTTTGCAATTTTTTTTGTGGGTTGCTAGATTTGCAATTATTTTGGCCCATATTGCTATCCTTGCAACCGACCCTATTAATATTTAGGGAAAAATACACTTTTGGTGTTTGAGTTAGGTTTCATTTTGGTCCTTGTTTTCAAACTCAACAATTTAGTACCTGAAGTTTGGTTTTAGTTTCAATTTGGTCCCTCCATCCAATTTTCCGTTAATAGTTAACAGATTGCTGACGTGACAAAAAGTTTTTATTCAAAAAATTATTTTTTAAGTTTTCTAAAATATAAATATAATAAAATAAAAATTATATTATTCTTTTATAATTTTTTTAGGGAAAAATACACTTTTAGTCCCTGAGGTTTGGGTTAAGTGACAGTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGTAGCATTTTGGTCCCTGCCGTCTATTTTTCTGTTAAATACTAACGGTTGCTGACGTGGCACTATTATTTTAATAAAAAAATTATTTTTTATATATATTTTTTTAAATAAAAACATATTAAAATAATAAAATATTATTATTTTATTTAAATTCTTTCTCTCTCTCTTCATTTCTTCTCCCCCATCTTCTTTCAACTTTCTTATCTCCTTCGGCGGCCATAATTTTTTTCTTTCTTTCTTTCTCCCTTTTTCTTCTCTCCTTTCTTTCTCCCCTTTTCTTCTCTCATTTCTTTCTCTCTTTCCTTCAATTTTTTTTTTTAAATAAAAAGAAGGGAGAGGGAGGAGGAGCCCTCCTCCCTCCCCGGTGCCAAAAATTGAAGGAAAGAGAGAAAGAAAGGAGAGAAGAAAAGGGGAGAAAAAAAAAAAAATTCTGGCCGCCGCCGCCGCCGCTCGCCGGCAGCCGGTGGCGGTCGGCCACCGGAGCTGAAGAAAAAGAAGGAGATAAGAAAGTTGAAAGAAGATGGGGGAGAAGAAAGGAAGAGAGAGAGAAAGAATTTAAATAAAATAATAATATTTTATTATTTTAATATGTTTTTATTTAAAAAAATATAAAAAATAATTTTTTTTATTAAAATAATAGTGCCACGTCAGCAACCGTTAGTATTTAACAAAAAAATAGACGGCAGGGACCAAAATGCTACTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAACTGTCACTTAACCCAAATCTCAGGGACTAAAAGTGTATTTTCCCCATTTTTTTTATTATTTTCCTTCCTCTCTCCCTCCTTCTTCTTTAACCTACCCAACTATTTCTTCTTCAACATTTCTCCGGTGACTGTCACACTGACCGGCGGCGGCGGCTGCCGGCGATAGGCCGGTCACCGCCGACGTTTTTTTTTCTTCTTTTCTCATCTTCTTCTTCTTTTTTTTTCCTTATCACTTCCTTTCTTCTTCTTTTTTTCTTCTATCTTCATTTTATTTTATTTTTTAAAAGAAGCAGATCTGAAAAAGTCTTTTCCTCATCTCTATTCCTTCAGCCTTTCATGATTCATAAATCTCTTCAGTCTTCACAAACTCTGCAATTGGGTTGCTTTCAAGCTCGAAATATGGTGTATTGGGACTGATTGTGTAGACTAGGAAGGGAAACTTCTGTTTCAAATCGTTGATTCCAGAGGATTCGAGCTCGTAAACAGAGGTGAAGAGGAGAAATTGAGCTCTGTCAACGGAATGGACGGAGTTCACGACAGATCCGACGACTTTGAGGTTGCAAGACGAATCTTCAACACTCCGGGGATGTAATCGACAATCTCTCCCCGCTCTTCAAAACAGAACCGTTCGGAAGACGAATCTTCGCTCTTCAAAGAAAATCTAAAAAACCCATATCTTATGCCGCGATTCATGGGCGTGAGCTTCGGATAGCTCTGCGAGTTCAGATCTCGTGGGTCAGCTTCGGCGTGGGTCAGTTTGCGAGCTTCGACAGTTCGTGGGCGTGAGCTTCGGTCGATCTCTCTCTCTAACTCTCGGACTTTCTCTCCCTCTCGTGTCTGTGTCCGGCGTCAGATCTGAGACGGTGGAGGGAGGATGA

mRNA sequence

ATGTCTGGCTCAAGGAGGAAGACCAGGGAACCCAAGGAAGAAACTGTGACTCTTGGACCTTCTGTGAGGGAAGGCGAGCATGTTTTTGGCGTAGCTCACATTTTTGCCTCATTTAATGATACATTTATTCATGTGACTGATCTTTCTGGGAGGGAAACCCTCGTCCGTATCACAGGTGGGATGAAGGTGAAAGCTGACAGGGATGAGTCCTCTCCATACGCAGCTATGCTTGCAGCACAGGATGTTTCTCAGAGATGCAAGGAACTCGGTATCACTGCCCTTCATATTAAACTGCGTGCTACGGGAGGAAACAAGACCAAAACGCCTGGCCCAGGTGCCCAGTCTGCACTCCGTGCTCTTGCTCGTTCTGGAATGAGAATTGGTCGCATAGCACTCGCAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAAGCTTGCTTCCGGCTTCCTCCGTTATGGCTATGTCAGTGGCTGTTCTATGGAAGGGAAACTTCTGTTTCAAATCGTTGATTCCAGAGGATTCGAGCTCGTAAACAGAGGTGAAGAGGAGAAATTGAGCTCTGTCAACGGAATGGACGGAGTTCACGACAGATCCGACGACTTTGAGGTTGCAAGACGAATCTTCAACACTCCGGGGATCTCTGCGAGTTCAGATCTCGTGGGTCAGCTTCGGCGTGGGTCAGTTTGCGAGCTTCGACAGTTCGTGGGCGTGAGCTTCGGTCGATCTCTCTCTCTAACTCTCGGACTTTCTCTCCCTCTCGTGTCTGTGTCCGGCGTCAGATCTGAGACGGTGGAGGGAGGATGA

Coding sequence (CDS)

ATGTCTGGCTCAAGGAGGAAGACCAGGGAACCCAAGGAAGAAACTGTGACTCTTGGACCTTCTGTGAGGGAAGGCGAGCATGTTTTTGGCGTAGCTCACATTTTTGCCTCATTTAATGATACATTTATTCATGTGACTGATCTTTCTGGGAGGGAAACCCTCGTCCGTATCACAGGTGGGATGAAGGTGAAAGCTGACAGGGATGAGTCCTCTCCATACGCAGCTATGCTTGCAGCACAGGATGTTTCTCAGAGATGCAAGGAACTCGGTATCACTGCCCTTCATATTAAACTGCGTGCTACGGGAGGAAACAAGACCAAAACGCCTGGCCCAGGTGCCCAGTCTGCACTCCGTGCTCTTGCTCGTTCTGGAATGAGAATTGGTCGCATAGCACTCGCAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAAGCTTGCTTCCGGCTTCCTCCGTTATGGCTATGTCAGTGGCTGTTCTATGGAAGGGAAACTTCTGTTTCAAATCGTTGATTCCAGAGGATTCGAGCTCGTAAACAGAGGTGAAGAGGAGAAATTGAGCTCTGTCAACGGAATGGACGGAGTTCACGACAGATCCGACGACTTTGAGGTTGCAAGACGAATCTTCAACACTCCGGGGATCTCTGCGAGTTCAGATCTCGTGGGTCAGCTTCGGCGTGGGTCAGTTTGCGAGCTTCGACAGTTCGTGGGCGTGAGCTTCGGTCGATCTCTCTCTCTAACTCTCGGACTTTCTCTCCCTCTCGTGTCTGTGTCCGGCGTCAGATCTGAGACGGTGGAGGGAGGATGA

Protein sequence

MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIALAERVVEEEEGFKLASGFLRYGYVSGCSMEGKLLFQIVDSRGFELVNRGEEEKLSSVNGMDGVHDRSDDFEVARRIFNTPGISASSDLVGQLRRGSVCELRQFVGVSFGRSLSLTLGLSLPLVSVSGVRSETVEGG

Homology

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BLAST of Lag0025068 vs. NCBI nr
Match: KAF3627608.1 (40S ribosomal protein S14 [Capsicum annuum])

HSP 1 Score: 258.5 bits (659), Expect = 6.5e-65
Identity = 134/144 (93.06%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+R+TREPKEETVTLGPSVREGE VFGVAHIFASFNDTFIHVTDLSGRET+VRITGGMKV
Sbjct: 53  SKRRTREPKEETVTLGPSVREGELVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKV 112

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDVSQRCKELGI ALHIKLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 113 KADRDESSPYAAMLAAQDVSQRCKELGINALHIKLRATGGNKTKTPGPGAQSALRALARS 172

Query: 124 GMRIGRIALAERVVEEEEGFKLAS 148
           GM+IGRIA AERVV EEEG KLA+
Sbjct: 173 GMKIGRIAPAERVVGEEEGCKLAA 196

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BLAST of Lag0025068 vs. NCBI nr
Match: KAF3957042.1 (hypothetical protein CMV_017904 [Castanea mollissima])

HSP 1 Score: 258.1 bits (658), Expect = 8.5e-65
Identity = 135/145 (93.10%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKTREPKEE VTLGP+VREGE VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTREPKEENVTLGPAVREGEQVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRIALA--ERVVEEEEGFKLA 147
           GM+IGRIA+A  ERVVEEEEG +LA
Sbjct: 122 GMKIGRIAIALVERVVEEEEGCELA 146

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BLAST of Lag0025068 vs. NCBI nr
Match: XP_038893713.1 (40S ribosomal protein S14-2-like [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-63
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRI 131
           ARSGMRIGRI
Sbjct: 121 ARSGMRIGRI 130

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BLAST of Lag0025068 vs. NCBI nr
Match: KAG7012516.1 (40S ribosomal protein S14-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253.1 bits (645), Expect = 2.7e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 39  MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 98

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 99  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 158

Query: 121 ARSGMRIGRI 131
           ARSGMRIGRI
Sbjct: 159 ARSGMRIGRI 168

[Close]

BLAST of Lag0025068 vs. NCBI nr
Match: KAG6573353.1 (hypothetical protein SDJN03_27240, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.1 bits (645), Expect = 2.7e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRI 131
           ARSGMRIGRI
Sbjct: 121 ARSGMRIGRI 130

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BLAST of Lag0025068 vs. ExPASy Swiss-Prot
Match: Q9CAX6 (40S ribosomal protein S14-2 OS=Arabidopsis thaliana OX=3702 GN=RPS14B PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.8e-61
Identity = 118/127 (92.91%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK ETVTLGPSVREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRI 131
           GM+IGRI
Sbjct: 122 GMKIGRI 128

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BLAST of Lag0025068 vs. ExPASy Swiss-Prot
Match: P19951 (40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.3e-60
Identity = 122/130 (93.85%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSG R+KTREPKEE V LGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSG-RKKTREPKEENV-LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLA+QDV+QRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRI 131
           ARSGM+IGRI
Sbjct: 121 ARSGMKIGRI 128

[Close]

BLAST of Lag0025068 vs. ExPASy Swiss-Prot
Match: P19950 (40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-60
Identity = 121/127 (95.28%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           SRRKTREPKEE V LGP+VREGE VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SRRKTREPKEENV-LGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRI 131
           GM+IGRI
Sbjct: 122 GMKIGRI 127

[Close]

BLAST of Lag0025068 vs. ExPASy Swiss-Prot
Match: Q9SIH0 (40S ribosomal protein S14-1 OS=Arabidopsis thaliana OX=3702 GN=RPS14A PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.6e-60
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK + VTLGPSVREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRI 131
           GM+IGRI
Sbjct: 122 GMKIGRI 128

[Close]

BLAST of Lag0025068 vs. ExPASy Swiss-Prot
Match: P42036 (40S ribosomal protein S14-3 OS=Arabidopsis thaliana OX=3702 GN=RPS14C PE=2 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 8.6e-60
Identity = 115/127 (90.55%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK E VTLGP+VREGE VFGV H+FASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRI 131
           GM+IGRI
Sbjct: 122 GMKIGRI 128

[Close]

BLAST of Lag0025068 vs. ExPASy TrEMBL
Match: A0A6J1KQN4 (40S ribosomal protein S14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111495605 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.3e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRI 131
           ARSGMRIGRI
Sbjct: 121 ARSGMRIGRI 130

[Close]

BLAST of Lag0025068 vs. ExPASy TrEMBL
Match: A0A6J1GTR2 (40S ribosomal protein S14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111456878 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.3e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRI 131
           ARSGMRIGRI
Sbjct: 121 ARSGMRIGRI 130

[Close]

BLAST of Lag0025068 vs. ExPASy TrEMBL
Match: A0A1S3B9H6 (40S ribosomal protein S14-2-like OS=Cucumis melo OX=3656 GN=LOC103487470 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.3e-63
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           MSGSRRKTREPKEETVTLGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRI 131
           ARSGMRIGRI
Sbjct: 121 ARSGMRIGRI 130

[Close]

BLAST of Lag0025068 vs. ExPASy TrEMBL
Match: A0A5A7UR49 (40S ribosomal protein S14-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00240 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.9e-63
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           +SGSRRKTREPKEETVTLGP+VREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 27  VSGSRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 86

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 87  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 146

Query: 121 ARSGMRIGRI 131
           ARSGMRIGRI
Sbjct: 147 ARSGMRIGRI 156

[Close]

BLAST of Lag0025068 vs. ExPASy TrEMBL
Match: F6HHE5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00740 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62
Identity = 133/157 (84.71%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSGSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60
           M  SRRK REPKEE VTLGP+VR+GEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG
Sbjct: 1   MFSSRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 60

Query: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 120
           MKVKADRDESSPYAAMLAAQDVSQRCKELG+TALHIKLRATGGNKTKTPGPGAQSALRAL
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRAL 120

Query: 121 ARSGMRIGRI-----------ALAERVVEEEEGFKLA 147
           ARSGMRIGRI           AL ERV EE E  +LA
Sbjct: 121 ARSGMRIGRIGGRMLPQSPLTALEERVEEEGEDCELA 157

[Close]

BLAST of Lag0025068 vs. TAIR 10
Match: AT3G11510.1 (Ribosomal protein S11 family protein )

HSP 1 Score: 235.3 bits (599), Expect = 5.5e-62
Identity = 118/127 (92.91%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK ETVTLGPSVREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRI 131
           GM+IGRI
Sbjct: 122 GMKIGRI 128

[Close]

BLAST of Lag0025068 vs. TAIR 10
Match: AT2G36160.1 (Ribosomal protein S11 family protein )

HSP 1 Score: 232.3 bits (591), Expect = 4.7e-61
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK + VTLGPSVREGE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRI 131
           GM+IGRI
Sbjct: 122 GMKIGRI 128

[Close]

BLAST of Lag0025068 vs. TAIR 10
Match: AT3G52580.1 (Ribosomal protein S11 family protein )

HSP 1 Score: 231.9 bits (590), Expect = 6.1e-61
Identity = 115/127 (90.55%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 4   SRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 63
           S+RKT+EPK E VTLGP+VREGE VFGV H+FASFNDTFIHVTDLSGRETLVRITGGMKV
Sbjct: 2   SKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKV 61

Query: 64  KADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 123
           KADRDESSPYAAMLAAQDV+QRCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALARS
Sbjct: 62  KADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARS 121

Query: 124 GMRIGRI 131
           GM+IGRI
Sbjct: 122 GMKIGRI 128

[Close]

BLAST of Lag0025068 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 )

HSP 1 Score: 52.0 bits (123), Expect = 8.7e-07
Identity = 39/123 (31.71%), Postives = 58/123 (47.15%), Query Frame = 0


Query: 3   GSRRKTREPKEETVTLGPSVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 62
           GSR+ TR    + V   P         GV H+ ASFN+T + VTD+ GR       G   
Sbjct: 9   GSRKNTRSGSRKNVRRIPK--------GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 68

Query: 63  VKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 122
            +  R   +P+AA  AA +  +   + G+    +++        K PG G  +ALRA+ R
Sbjct: 69  FRGTR-RGTPFAAQTAAGNAIRAVVDQGMQRAEVRI--------KGPGLGRDAALRAIRR 114

Query: 123 SGM 126
           SG+
Sbjct: 129 SGI 114

The following BLAST results are available for this feature:

BLAST of Lag0025068 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3627608.1	6.5e-65	93.06	40S ribosomal protein S14 [Capsicum annuum]	[more]
KAF3957042.1	8.5e-65	93.10	hypothetical protein CMV_017904 [Castanea mollissima]	[more]
XP_038893713.1	1.2e-63	100.00	40S ribosomal protein S14-2-like [Benincasa hispida]	[more]
KAG7012516.1	2.7e-63	99.23	40S ribosomal protein S14-2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6573353.1	2.7e-63	99.23	hypothetical protein SDJN03_27240, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lag0025068 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAX6	7.8e-61	92.91	40S ribosomal protein S14-2 OS=Arabidopsis thaliana OX=3702 GN=RPS14B PE=1 SV=1	[more]
P19951	2.3e-60	93.85	40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1	[more]
P19950	3.9e-60	95.28	40S ribosomal protein S14 OS=Zea mays OX=4577 PE=3 SV=1	[more]
Q9SIH0	6.6e-60	91.34	40S ribosomal protein S14-1 OS=Arabidopsis thaliana OX=3702 GN=RPS14A PE=1 SV=1	[more]
P42036	8.6e-60	90.55	40S ribosomal protein S14-3 OS=Arabidopsis thaliana OX=3702 GN=RPS14C PE=2 SV=2	[more]

BLAST of Lag0025068 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KQN4	1.3e-63	99.23	40S ribosomal protein S14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111495605 PE=...	[more]
A0A6J1GTR2	1.3e-63	99.23	40S ribosomal protein S14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111456878 P...	[more]
A0A1S3B9H6	1.3e-63	99.23	40S ribosomal protein S14-2-like OS=Cucumis melo OX=3656 GN=LOC103487470 PE=3 SV...	[more]
A0A5A7UR49	3.9e-63	98.46	40S ribosomal protein S14-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
F6HHE5	2.5e-62	84.71	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00740 PE=3 SV=...	[more]

BLAST of Lag0025068 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11510.1	5.5e-62	92.91	Ribosomal protein S11 family protein	[more]
AT2G36160.1	4.7e-61	91.34	Ribosomal protein S11 family protein	[more]
AT3G52580.1	6.1e-61	90.55	Ribosomal protein S11 family protein	[more]
ATCG00750.1	8.7e-07	31.71	ribosomal protein S11	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 30..130 e-value: 8.3E-37 score: 126.0
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 3..130
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 5..149 score: 14.851332
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 3..134 e-value: 1.5E-55 score: 189.3
None	No IPR available	PANTHER	PTHR11759:SF37	BNAA05G27530D PROTEIN	coord: 3..130
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 26..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0025068.1	Lag0025068.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0048027	mRNA 5'-UTR binding
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome