Lag0014963 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0014963
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr12: 6260312 .. 6260692 (-)
RNA-Seq ExpressionLag0014963
SyntenyLag0014963
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGAAGAACCAGACCCTTTTCCCGATCGCCCAAGTCTCCGTCGGAAACCTTTCACAAGTATCTAAAGCCCGGCGCACTAGCGCAAATTCGGAATTCGAGGATGATCGCCCGATTCAATCGGGTCAATTTCGCCTCTCAGATCTACTCCACTCGTTCTTCACCTCTATCGCCGCCGAGTCCGCCGATCGACTCCGGTCTCCTTCAGGTGAACATTCTTGATGCCTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCCCTCTGCTTGCAGAGGAAGAAACTTTTGGCTGCTAAGTCTTTGTGGTTCCTCAGTTCTGGTCCGACGAATTTGAACCCTGATTCTCCGCCTGACCCGGTTATTGAAGTGTTAGGGGGGTGA

mRNA sequence

ATGAATCGAAGAACCAGACCCTTTTCCCGATCGCCCAAGTCTCCGTCGGAAACCTTTCACAAGTATCTAAAGCCCGGCGCACTAGCGCAAATTCGGAATTCGAGGATGATCGCCCGATTCAATCGGGTCAATTTCGCCTCTCAGATCTACTCCACTCGTTCTTCACCTCTATCGCCGCCGAGTCCGCCGATCGACTCCGGTCTCCTTCAGGTGAACATTCTTGATGCCTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCCCTCTGCTTGCAGAGGAAGAAACTTTTGGCTGCTAAGTCTTTGTGGTTCCTCAGTTCTGGTCCGACGAATTTGAACCCTGATTCTCCGCCTGACCCGGTTATTGAAGTGTTAGGGGGGTGA

Coding sequence (CDS)

ATGAATCGAAGAACCAGACCCTTTTCCCGATCGCCCAAGTCTCCGTCGGAAACCTTTCACAAGTATCTAAAGCCCGGCGCACTAGCGCAAATTCGGAATTCGAGGATGATCGCCCGATTCAATCGGGTCAATTTCGCCTCTCAGATCTACTCCACTCGTTCTTCACCTCTATCGCCGCCGAGTCCGCCGATCGACTCCGGTCTCCTTCAGGTGAACATTCTTGATGCCTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCCCTCTGCTTGCAGAGGAAGAAACTTTTGGCTGCTAAGTCTTTGTGGTTCCTCAGTTCTGGTCCGACGAATTTGAACCCTGATTCTCCGCCTGACCCGGTTATTGAAGTGTTAGGGGGGTGA

Protein sequence

MNRRTRPFSRSPKSPSETFHKYLKPGALAQIRNSRMIARFNRVNFASQIYSTRSSPLSPPSPPIDSGLLQVNILDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSGPTNLNPDSPPDPVIEVLGG
Homology
BLAST of Lag0014963 vs. NCBI nr
Match: XP_023530330.1 (uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 7.6e-56
Identity = 113/126 (89.68%), Postives = 116/126 (92.06%), Query Frame = 0

Query: 1   MNRRTRPFSRSPKSPSETFHKYLKPGALAQIRNSRMIARFNRVNFASQIYSTRSSPLSPP 60
           MNRR+R FSRS KS SETFHKYLKPGALAQIRNSRMIARFNRVN  SQIYSTRSS LSPP
Sbjct: 1   MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPP 60

Query: 61  SPPIDSGLLQVNILDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSGPTNLNPDSPPDPV 120
           + PIDS LLQVNI+DASPCFAGRVYGPLCLQRKKLLAAKSLWFLSS PTNL PDSPPDPV
Sbjct: 61  TAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTNLTPDSPPDPV 120

Query: 121 IEVLGG 127
           IEVLGG
Sbjct: 121 IEVLGG 126

BLAST of Lag0014963 vs. NCBI nr
Match: KAG7022864.1 (hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 112/126 (88.89%), Postives = 115/126 (91.27%), Query Frame = 0

Query: 1   MNRRTRPFSRSPKSPSETFHKYLKPGALAQIRNSRMIARFNRVNFASQIYSTRSSPLSPP 60
           MNRR+R F RS KS SETFHKYLKPGALAQIRNSRMIARFNRVN  SQIYSTRSS LSPP
Sbjct: 1   MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPP 60

Query: 61  SPPIDSGLLQVNILDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSGPTNLNPDSPPDPV 120
           + PIDS LLQVNI+DASPCFAGRVYGPLCLQRKKLLAAKSLWFLSS PTNL PDSPPDPV
Sbjct: 61  TAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTNLTPDSPPDPV 120

Query: 121 IEVLGG 127
           IEVLGG
Sbjct: 121 IEVLGG 126

BLAST of Lag0014963 vs. NCBI nr
Match: XP_022930695.1 (uncharacterized protein LOC111437092 [Cucurbita moschata])

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 111/126 (88.10%), Postives = 114/126 (90.48%), Query Frame = 0

Query: 1   MNRRTRPFSRSPKSPSETFHKYLKPGALAQIRNSRMIARFNRVNFASQIYSTRSSPLSPP 60
           MNRR+R F RS KS SETFHKYLKPGALAQIRNSRMIARFNRVN  SQIYSTR S LSPP
Sbjct: 1   MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPP 60

Query: 61  SPPIDSGLLQVNILDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSGPTNLNPDSPPDPV 120
           + PIDS LLQVNI+DASPCFAGRVYGPLCLQRKKLLAAKSLWFLSS PTNL PDSPPDPV
Sbjct: 61  TAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTNLTPDSPPDPV 120

Query: 121 IEVLGG 127
           IEVLGG
Sbjct: 121 IEVLGG 126

BLAST of Lag0014963 vs. NCBI nr
Match: XP_022989505.1 (uncharacterized protein LOC111486563 [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 111/126 (88.10%), Postives = 114/126 (90.48%), Query Frame = 0

Query: 1   MNRRTRPFSRSPKSPSETFHKYLKPGALAQIRNSRMIARFNRVNFASQIYSTRSSPLSPP 60
           MNRR+R F RS KS SETFHKYLKPGALAQIRNSRMIARFNRVN  SQIYSTRSS LSPP
Sbjct: 1   MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPP 60

Query: 61  SPPIDSGLLQVNILDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSGPTNLNPDSPPDPV 120
           + PIDS LLQVNI+DASPCFAGRVYGPLCLQRKKLLAAKSLWFLSS  TNL PDSPPDPV
Sbjct: 61  TAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSLTNLTPDSPPDPV 120

Query: 121 IEVLGG 127
           IEVLGG
Sbjct: 121 IEVLGG 126

BLAST of Lag0014963 vs. NCBI nr
Match: XP_022135897.1 (uncharacterized protein LOC111007734 [Momordica charantia])

HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51
Identity = 108/126 (85.71%), Postives = 112/126 (88.89%), Query Frame = 0

Query: 1   MNRRTRPFSRSPKSPSETFHKYLKPGALAQIRNSRMIARFNRVNFASQIYSTRSSPLSPP 60
           MNRR+R F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVN  SQIYS RSS LSPP
Sbjct: 1   MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSS-LSPP 60

Query: 61  SPPIDSGLLQVNILDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSGPTNLNPDSPPDPV 120
           S P+DSGLLQVNI+DASPCFAGRVYGP CLQRKKLLAAKSLWFLS  PTNL PDSPPDPV
Sbjct: 61  SAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSLWFLSPSPTNLVPDSPPDPV 120

Query: 121 IEVLGG 127
           IEVLGG
Sbjct: 121 IEVLGG 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023530330.17.6e-5689.68uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo][more]
KAG7022864.13.8e-5588.89hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022930695.11.4e-5488.10uncharacterized protein LOC111437092 [Cucurbita moschata][more]
XP_022989505.14.2e-5488.10uncharacterized protein LOC111486563 [Cucurbita maxima][more]
XP_022135897.12.5e-5185.71uncharacterized protein LOC111007734 [Momordica charantia][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35495OS06G0679600 PROTEINcoord: 1..125
NoneNo IPR availablePANTHERPTHR35495:SF10SUBFAMILY NOT NAMEDcoord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0014963.1Lag0014963.1mRNA