Lag0013736 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0013736
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	cysteine-rich receptor-like protein kinase 10
Location	chr1: 52346535 .. 52347619 (+)
RNA-Seq Expression	Lag0013736
Synteny	Lag0013736

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTAGTGAGGTGGAGATGCTTCAATTTGATTTCGACACGGTCAAAGAAGCAACAGATGGATTCTGAAATGAAAATAAGCTTGGACGGGGTGGATTTGGAGCGGTCTACAAGGTATATATAATTTTATAACTGAGATGATCATGATATTTTTACTAAGTAATAATTAAATCGCGAGGTAAATAATAATAATTTAGGGAAAGTTGCTGAATGGACAAAACGTAGCGGTGAAGAGGCTTTCGAGGGACTCAAATCAAGGAGATCATGTGGCTTCAACACAGGAACTTAGTTAGGTTGCTGGGGGTTTTGCTTGGAGAGAAATGAAAGACTTCTCTCATCTATGAGTTTCTACCAAATGCCAGCCTCGATCACTTCCTACTTGGTATAATATATATTTTATTTTCATACCCTCCCATCCTTTTTTTTATTTTTCTTAATCTTTGTAGTGGTTACATGGCTCCCGAATATATCTATCATGGACAATTTTCAACACAAAATCAGACTTGTTTAGCTTTGGTGTTTTGATTCTCGAGGTTGTATGCGGTAGAATGAATAATTATTTCTATAATAATGGAGGAGAGGCTGAAAATCTTTTAGACTTCGTAAGTGCATACATCAACAAAAAACATAAAAATTAAGGAAAATTCTTTTATAAGTCTAAAATATAATACATCTCCTTGGCTATTTTTTTTTGGGTGAAATATGATGGTAAAGGACATCAAGGATAGTTGGCATTCGGCATCAAAGTTAAGTGATATGGGTTACGTTTGATGGTTGCAGGCATGGGAAAACTGGAGGGCAGGAACAACGGAAAATATCATAGATACAACGTTAAGGTCAAGTTCAGGTCCGAGGATGGAAATAATAAGATGCATTCATATCGGATTGTTATGTGCTCAAGGAAACGCAGTAGATCGACCAACAATGTCTTCAGTGATTTTGATGCTTAACAGTTATTCTGTCAATCTCCCGCTACCTTCTCCACCTGCATTCGACCTGAGTTCTTATCACTCCCCAACTGCTGATCTTCATCTTTCGCAAAATAATGAAGAAACTTCCATTTCTGATCTTTATCCTCGCTAG

mRNA sequence

ATGAAATTAGTGAGGTGGAGATGCTTCAATTTGATTTCGACACGGTCAAAGAAGCAACAGATGGATTCTGAAATGAAAATAAGCTTGGACGGGGTGGATTTGGAGCGGTCTACAAGAATGAATAATTATTTCTATAATAATGGAGGAGAGGCTGAAAATCTTTTAGACTTCGCATGGGAAAACTGGAGGGCAGGAACAACGGAAAATATCATAGATACAACGTTAAGGTCAAGTTCAGGTCCGAGGATGGAAATAATAAGATGCATTCATATCGGATTGTTATGTGCTCAAGGAAACGCAGTAGATCGACCAACAATGTCTTCAGTGATTTTGATGCTTAACAGTTATTCTGTCAATCTCCCGCTACCTTCTCCACCTGCATTCGACCTGAGTTCTTATCACTCCCCAACTGCTGATCTTCATCTTTCGCAAAATAATGAAGAAACTTCCATTTCTGATCTTTATCCTCGCTAG

Coding sequence (CDS)

ATGAAATTAGTGAGGTGGAGATGCTTCAATTTGATTTCGACACGGTCAAAGAAGCAACAGATGGATTCTGAAATGAAAATAAGCTTGGACGGGGTGGATTTGGAGCGGTCTACAAGAATGAATAATTATTTCTATAATAATGGAGGAGAGGCTGAAAATCTTTTAGACTTCGCATGGGAAAACTGGAGGGCAGGAACAACGGAAAATATCATAGATACAACGTTAAGGTCAAGTTCAGGTCCGAGGATGGAAATAATAAGATGCATTCATATCGGATTGTTATGTGCTCAAGGAAACGCAGTAGATCGACCAACAATGTCTTCAGTGATTTTGATGCTTAACAGTTATTCTGTCAATCTCCCGCTACCTTCTCCACCTGCATTCGACCTGAGTTCTTATCACTCCCCAACTGCTGATCTTCATCTTTCGCAAAATAATGAAGAAACTTCCATTTCTGATCTTTATCCTCGCTAG

Protein sequence

MKLVRWRCFNLISTRSKKQQMDSEMKISLDGVDLERSTRMNNYFYNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGLLCAQGNAVDRPTMSSVILMLNSYSVNLPLPSPPAFDLSSYHSPTADLHLSQNNEETSISDLYPR

Homology

[Close]

BLAST of Lag0013736 vs. NCBI nr
Match: EYU26074.1 (hypothetical protein MIMGU_mgv1a025313mg, partial [Erythranthe guttata])

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-25
Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 0


Query: 34  LERSTRMNNYFYNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGL 93
           LE      N  +N G   E++L FAW NWR G  + +ID TL+SSSG   +I++CIHIGL
Sbjct: 241 LEIIIGQKNNSFNKGENTESMLSFAWRNWREGKAKKMIDPTLKSSSGSFRDILKCIHIGL 300

Query: 94  LCAQGNAVDRPTMSSVILMLNSYSVNLPLPSPPAF------DLSSYHSPTADLHLSQNNE 153
           LC Q NAVDRP M+SVILML+S+S+ LP PS PAF      D+  + S  A L   Q+N 
Sbjct: 301 LCVQENAVDRPIMASVILMLSSFSITLPRPSRPAFFIPNSRDVECHKSSDARLR-DQSNN 360

Query: 154 ETSISDLYPR 158
           E SI+DLYPR
Sbjct: 361 EASITDLYPR 369

[Close]

BLAST of Lag0013736 vs. NCBI nr
Match: XP_017230913.1 (PREDICTED: putative receptor-like protein kinase At4g00960 [Daucus carota subsp. sativus])

HSP 1 Score: 124.4 bits (311), Expect = 8.7e-25
Identity = 67/137 (48.91%), Postives = 88/137 (64.23%), Query Frame = 0


Query: 34  LERSTRMNNYFYNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGL 93
           LE  +   N+ + NGG  E+L  FAW+NWR GT  N+ID  L++SSG   E+IRCIHIGL
Sbjct: 537 LEILSGKKNHNFRNGGNVEDLASFAWKNWREGTPSNVIDPILKNSSGSIHEMIRCIHIGL 596

Query: 94  LCAQGNAVDRPTMSSVILMLNSYSVNLPLPSPPAFDL-SSYHSPTADLHLSQNN------ 153
           LC Q N  DRPTM+SV+LMLNS+S +L +PS PAF + S+  +   D  +S N+      
Sbjct: 597 LCVQENVTDRPTMASVVLMLNSFSHSLAVPSKPAFLMHSTIDAENNDSRVSHNSKNSTEN 656

Query: 154 ------EETSISDLYPR 158
                 +E SI+DLYPR
Sbjct: 657 SVQYSIDEASITDLYPR 673

[Close]

BLAST of Lag0013736 vs. NCBI nr
Match: XP_022142138.1 (putative receptor-like protein kinase At4g00960 isoform X3 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-24
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 45  YNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGLLCAQGNAVDRP 104
           ++ GGE ENLL FAW+NW+AGT EN+ID  + SSS   +E+IRCIHIGLLC Q N  DRP
Sbjct: 479 FDKGGENENLLSFAWKNWKAGTPENVID--MISSSSSSIEMIRCIHIGLLCVQANVADRP 538

Query: 105 TMSSVILMLNSYSVNLPLPSPPAFDLSSYH-----SPTADLHLSQNNEETSISDLYPR 158
           TM+SV++MLNS+S+ L LPS PAF + S +     + +  + L  +    SISD YPR
Sbjct: 539 TMTSVVMMLNSFSLTLSLPSQPAFFVHSNYILSNANDSQKIPLQASENAVSISDFYPR 594

[Close]

BLAST of Lag0013736 vs. NCBI nr
Match: XP_022142137.1 (cysteine-rich receptor-like protein kinase 29 isoform X2 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-24
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 45  YNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGLLCAQGNAVDRP 104
           ++ GGE ENLL FAW+NW+AGT EN+ID  + SSS   +E+IRCIHIGLLC Q N  DRP
Sbjct: 559 FDKGGENENLLSFAWKNWKAGTPENVID--MISSSSSSIEMIRCIHIGLLCVQANVADRP 618

Query: 105 TMSSVILMLNSYSVNLPLPSPPAFDLSSYH-----SPTADLHLSQNNEETSISDLYPR 158
           TM+SV++MLNS+S+ L LPS PAF + S +     + +  + L  +    SISD YPR
Sbjct: 619 TMTSVVMMLNSFSLTLSLPSQPAFFVHSNYILSNANDSQKIPLQASENAVSISDFYPR 674

[Close]

BLAST of Lag0013736 vs. NCBI nr
Match: XP_022142136.1 (putative receptor-like protein kinase At4g00960 isoform X1 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-24
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 45  YNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGLLCAQGNAVDRP 104
           ++ GGE ENLL FAW+NW+AGT EN+ID  + SSS   +E+IRCIHIGLLC Q N  DRP
Sbjct: 566 FDKGGENENLLSFAWKNWKAGTPENVID--MISSSSSSIEMIRCIHIGLLCVQANVADRP 625

Query: 105 TMSSVILMLNSYSVNLPLPSPPAFDLSSYH-----SPTADLHLSQNNEETSISDLYPR 158
           TM+SV++MLNS+S+ L LPS PAF + S +     + +  + L  +    SISD YPR
Sbjct: 626 TMTSVVMMLNSFSLTLSLPSQPAFFVHSNYILSNANDSQKIPLQASENAVSISDFYPR 681

[Close]

BLAST of Lag0013736 vs. ExPASy Swiss-Prot
Match: Q8S9L6 (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.9e-20
Identity = 58/132 (43.94%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 32  VDLERSTRMNNYFYNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHI 91
           +++    R NN   N   +AE+LL + W +WR  T  ++ID +L  ++G R EI+RCIHI
Sbjct: 552 IEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSL--TAGSRNEILRCIHI 611

Query: 92  GLLCAQGNAVDRPTMSSVILMLNSYSVNLPLPSPPAFDL------SSYHSPTADLHLSQN 151
           GLLC Q +A  RPTM++V LMLNSYS  LP P  PAF L      S+  S T  L +S N
Sbjct: 612 GLLCVQESAATRPTMATVSLMLNSYSFTLPTPLRPAFVLESVVIPSNVSSSTEGLQMSSN 671

Query: 152 NEETSISDLYPR 158
             + ++S+  PR
Sbjct: 672 --DVTVSEFSPR 679

[Close]

BLAST of Lag0013736 vs. ExPASy Swiss-Prot
Match: O65405 (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CRK28 PE=3 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 60/123 (48.78%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 41  NNYFYNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGLLCAQGNA 100
           NN   N+  EAENLL + W  WR     ++ID +L  ++G R EI+RCIHIGLLC Q + 
Sbjct: 565 NNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSL--TTGSRSEILRCIHIGLLCVQESP 624

Query: 101 VDRPTMSSVILMLNSYSVNLPLPSPPAFDLSS------YHSPTADLHLSQNNEETSISDL 158
             RPTM SV LMLNSYS  LP PS PAF L S        S T  L +S N  + ++S+L
Sbjct: 625 ASRPTMDSVALMLNSYSYTLPTPSRPAFALESVMPSMNVSSSTEPLLMSLN--DVTVSEL 683

[Close]

BLAST of Lag0013736 vs. ExPASy Swiss-Prot
Match: O23081 (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana OX=3702 GN=CRK41 PE=3 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 5.3e-17
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 54  LLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGLLCAQGNAVDRPTMSSVILML 113
           LL + W++WR G   NI+D +L  + G   EI++CIHIGLLC Q NA  RPTM+SV++ML
Sbjct: 559 LLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVML 618

Query: 114 NSYSVNLPLPSPPAFDLSSYHSPTADLHLSQNNEETSISDL 155
           N+ S  LP PS PAF      S + D   +Q N   S++D+
Sbjct: 619 NANSFTLPRPSQPAFYSGDGESLSRD--KNQINHIASLNDV 657

[Close]

BLAST of Lag0013736 vs. ExPASy Swiss-Prot
Match: P0DH86 (G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana OX=3702 GN=SRK PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-15
Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 34  LERSTRMNNYFYNNGGEAENLLDFAWENWRAGTTENIIDTTLRSSSGPRM-----EIIRC 93
           LE  +   N  ++N G+  NLL + WENW+ G    I+D+ +  SS         E++RC
Sbjct: 718 LEIVSGKRNRGFHNSGQDNNLLGYTWENWKEGKGLEIVDSIIVDSSSSMSLFQPHEVLRC 777

Query: 94  IHIGLLCAQGNAVDRPTMSSVILMLNSYSVNLPLPSPPAFDLSSYHSPTADLHLSQNNEE 153
           I IGLLC Q  A DRP MSSV+LML S    +P P  P + +      TAD   S   + 
Sbjct: 778 IQIGLLCVQERAEDRPKMSSVVLMLGSEKGEIPQPKRPGYCVGRSSLDTADSSSSTKRDS 837

[Close]

BLAST of Lag0013736 vs. ExPASy Swiss-Prot
Match: O23082 (Putative receptor-like protein kinase At4g00960 OS=Arabidopsis thaliana OX=3702 GN=At4g00960 PE=3 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 3.8e-15
Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 54  LLDFAWENWRAGTTENIIDTTLRSSSGPRMEIIRCIHIGLLCAQGNAVDRPTMSSVILML 113
           LL + W+ WR G   NI+D +L  + G   EI +CIHIGLLC Q N   RPTM+S++ ML
Sbjct: 271 LLSYVWKCWREGEVLNIVDPSLIETRGLSDEIRKCIHIGLLCVQENPGSRPTMASIVRML 330

Query: 114 NSYSVNLPLPSPPAFDLSSYHSPTADLHLSQNNEETSISDL 155
           N+ S  LP P  PAF      S + D + ++N    S++D+
Sbjct: 331 NANSFTLPRPLQPAFYSGVVDSSSRDNNHTRNPRIASLNDV 371

The following BLAST results are available for this feature:

BLAST of Lag0013736 vs. NCBI nr


Match Name	E-value	Identity	Description
EYU26074.1	2.3e-25	52.31	hypothetical protein MIMGU_mgv1a025313mg, partial [Erythranthe guttata]	[more]
XP_017230913.1	8.7e-25	48.91	PREDICTED: putative receptor-like protein kinase At4g00960 [Daucus carota subsp....	[more]
XP_022142138.1	1.5e-24	53.39	putative receptor-like protein kinase At4g00960 isoform X3 [Momordica charantia]	[more]
XP_022142137.1	1.5e-24	53.39	cysteine-rich receptor-like protein kinase 29 isoform X2 [Momordica charantia]	[more]
XP_022142136.1	1.5e-24	53.39	putative receptor-like protein kinase At4g00960 isoform X1 [Momordica charantia]	[more]

BLAST of Lag0013736 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9L6	3.9e-20	43.94	Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O65405	5.1e-20	48.78	Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O23081	5.3e-17	46.53	Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P0DH86	2.2e-15	37.90	G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis...	[more]
O23082	3.8e-15	42.57	Putative receptor-like protein kinase At4g00960 OS=Arabidopsis thaliana OX=3702 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 34..120 e-value: 3.0E-7 score: 31.8
None	No IPR available	PANTHER	PTHR27002	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	coord: 45..135
None	No IPR available	PANTHER	PTHR27002:SF817	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	coord: 45..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0013736.1	Lag0013736.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0004672	protein kinase activity