HG10020556 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTACTGATAAGGGCAAGAAAGCCAAGCACTCTGAAAAGCCCGAAGACGACAATTCGGAGGTCATCGATGAGAAACTCGTTATATCCATCGAGAAATTGCAGGAAATTCAAGACGAGCTCGAGAAGGTACTGATTCAATGCTTCTTTTCTCTCTCACTCTATCATTCTATCGCGTTTTTTTTTCCCTTTTTGCGACCCCCTCTGTTTAATGCTTACCCCAGGAGGTTAATGAAGCCAAGCGAAAAGCGTTACCTTGTGATCTATCATTTTCTTTTTTGGGTGCTCAGTTGAGCTTGTGCCTTCTTGCAATTGAGCTGGACGGAATTGGGTTCACATTAACTCAATTGGTGCTTCGGAATTTTCTTTTATGGGTCACGTCTTCTAATTCTACTTCAATTGTTACCCAAAGCTTAAGGCTTTATGTAGTTTTGTTGAAGAACGTCAATGCTGACGTTCAATTCCTTTTACCTGCTCTTGGGAAATCTGATTGTTGGTTTTTAAACTCATTAAGACTGAGTGGCTTTGTCCCTTGTGTGATTTATAAACTAATTCTAAAGCTTTGTTAACATTTAGCCCTTATTGATAGTGATACATCCCATGATACCTGGATAAAATGAATTACGTTGGGATAAATGTTCATCTTGAATTATACCCTGCGAGTTCACTGTTCCTGCGACCAAACAGTTATAAAGTCTTCCTCTTACTCCTAAGTACTGTAGAAAGCTGGTATCTTATTAATAAGGGTGTATATTTAATTATATAGTATCACTGCTAGATAAAGATTGACGTATATTCTACAAGTTAATTAACTTTTTGCCAGTAAGTTTGTGATAATCATGTTGTTTATTTGGCTTGATCTTCAAGATCAATGAGGAGGCCAGTGATAAAGTCTTGGAAGTGGAACAGAAATACAATGAAGTACGAAAGCCTGTCTACGATAAGCGGAATGAGATCATCAAATCAATTCCCGACTTCTGGTTAACAGCGGTTAGTATTATCCTCTCAAATCTGTCATCTTTGAACTGATTATGAACTTGTTATCACGCTGATGAGTTTCATGCCGGTCATAGTTCAGTAAAGATTTTAAGTGGGTCCACTGATTCTTCCTCTCTGTTTCCTATGATAAAAATAACTGTTTCTTCTTCAACGTGCAGTTCTTGAGTCATCCTGCTCTTTGTGAACTTTTGACTGAAGAGGACCAGAAGGTTTGGTTTGTCTCTCTCTTTTTATTTTTTCTGAGTTTTCAAAATTGTAAATGAAATTGCAAGTAAAATGCTGAATTTTAATAGTGAAACTGATTTTGAACTCGCATAATCTTGTTTTAGTATCTTCTGTCCAAATGGCTATTAAATTGTTGTTGTTCGTTTTGCCTTTGTTAGATATTCAAACATCTCACCTCCCTGGAAGTGGAAGATTTTAAAGATGTCAAATCGGGTTACTCAATTACTTTTGTGAGTTTGAATCATTTCCCTAGCTTGCTCCTTTTCTGTTCTGTTCCTACATTTTGCTTTTATTTTTTCTATAGTGATTTCTTGCCCTTTGTGTTTCCTACATTCTATTTCTTTAGGAGTACTTATTTTGTGTCTTTGATTCTACAGAACTTCAACACCAACCCTTATTTTGAAGATACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACAAGGAAAATTAATGCTACATCCATAAAATGGAAAGAGGGAATGGTGAGAGGTCTCCCCTCCGATTAGTGCTTGTATTGGTTCGCCAAATTATTTTCACTAACTGTTTACTGTACTCTACATATTTGAAGGGTTTACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGACCTCAGGCTGAGGAAAGGTTGGTTATTAAACTGTTTATTAATAATCATCATTTATAGTTTTTATTATTATTAAATTTATATATATATATATTATTGCTTTTATGGTTATTTGTGAAAGAACCGTCACTAGACTATCTAATATATGCTAGTTCTTTTGTTATACAAAGTCGTAAAAATTTATGAGGAAATAACGGTGATTCAGTTTAGCTATTTGAGTCAAAACTCATGCAATGGTAGATTATAATCAGTGTTATAAAAGGCTGATCTTTTGAGAATTTTTATTGTAAAAAAGTCCAAGAAAAACTCTTAACAGTTAAATGAGGTATGTGCTTAAATTCAAGAGAGTGTTAATTCCTTAGTCTATATTTGTTTGATAACTTTCCAAGTCTAATATGACTTTATTTTCAAATTTTTGGCGTTATTAGAATTCAATAGACTGAATTGCATTGCATATCGAGAATAGATTTCTAGCATTTCATGAAAATAATTTCGCATTTCAGAAAGCATATAATCTTTTGAGAAGCAAAAGGGAAGAATGCTTAATAAAACAACTGAATGATAGAACTCTTTCTGTTACTAATAATCAGAGAGATTATGAGCTCCCTACCTTTCTACTCTTTGCAAACCACTAGCTGAAAAGACACCGTTATTTTCACTGCATCTGACTATGTACAGGGTAACCAACTATTCCCAAAACATTACCACCATAACTAACTTGGGCCCACAGGCGGGCCCCCCTCTCTCCTCTCCTGTGCCTCACGAACCCTTCTTTGTTTTTTTGTACACCTTAGGAAGTTGATAGTAAGTTTATTAGGAGATATATTAGTAATTAGTTAGGGAAGTAATGGTATTTAGTAAAAAATAAAGGGAGTGGAAATGGAGGAAGGTAGACATCGATTAAATTAGCTTAGGCATGAGTTTTCACTATAAAGGGAGGGTCCAAGTACCTTGAACTATCTGGTTATCTTGTAGTTCTTTACCTTTTATATTTCAATATCATTTTAGTTCTATATGGGTTCTATCAAAAGTCCTATTAACAAGGTAAAGCCCGATATCAAGAAAATGATCTATCTGAGAAAGCTGACTGCAAAAAGAGCGAAAGAAAGAAGTTAAATCCCTGATGCCATTTAAATGAATAAAACCTTGAGATGAGGTAAAAAGAGAGGAAAAGAAATATCTAGTTGCTGATAGAGCAGATAATTGAAAACTGAAGTACAATCAATCAGAGATGGGGGAATCACGGAATGAGCTATAAAAGGAACAGAGAGAGAGGAAGAGTGGGAGGGACAAAATCTATGTTGTAGTAATAATTTAGATGGTGTGCTATTTTCTCTCATCTTCTCTTCTTTCTTTCTCTTTCCAATTGTTTTTTTTACCCGACTTCAGATTCAATGGACATCCAGAGATTCAAGGATTTGAGTTGATAATAAAAAGGCAAATGGCCAGAGAGATTTAAGCTCTGAAAAATGAGGTGGTTTATTAAGTGTATGCCTCAAGTTTTTTTCTAGTACCTCAATACTAATCATGCATTAAGGCTAAGGTATCAAATGCAAATTAAGACAAAGATCACTAGTTTTTTTTCACATTATGCAAGATCATGACAATTATAGAAACATCTCATAATAGGGAAAAGAAAGCGTTTTTGTTTGCTGATTATACGTCAGTCTGATTGATTGATTAGCTGTACTTTACTTGCATTTGAGACCTGAGCACTGAAGTTTAGCTGTTCTACCTCTTTAATTGGGCTGGAATTTACTTTTCTGTGAAAAAGGGTTTTTCTTTTAATCTCTTGAAGTAATTTGTATTGGAAAACTTCAAAATGGAAGGAAAATGTCAAAAAGTTTTTGTTGCTCAATTCACTATCTGTCTATCTCTAGTATTAGCTGATGTCATATACTCATAGCTATAATCTTATTATCGATGAATGCATTTCCAAGTGACAATGCCTCCTGTGTGCATGAAATGAAGAAAATGCCCAGAACCTTCTTTTTCTTTTTCTCAAATAATTCATATGACCTCACTGGTTGTACACTTTTTCCTGTTTTGGGTGCAGCTTTTTTAGCTGGTTCAGCGATACAGAACAGAAAGATATTGATGACTTTCATGATGAGGTAAGAAAAAATATATTGCATATTCAGATCACCCCCACAAAAAGTTCTTGTTTTGAATATGGCGTTTGCATGCCTCAGAGGCTGGCTGTTACATAACTGACCAAAACAAAAATTTTCCCAATTAAATAAATAGGAATACTATAATCTTTATGACGATTCCCCTTTCACTTCAAAATAAAAGCTATGTTTTGAAATCCTCTCTGGGTTACAGGTTGCAGAAATTATCAAGGAGGACTTATGGCCTAACCCTTTATCCTACTTCAATAATGTATGTTTCTTTCTGCTTCGTAGGTTTTCCTCTTCTCAGCACACAAGCTGAAATTGTACTTAATTAATGTTTGCTACATAGCTATTTTCTCTAACAGTTATTGTACTGTGATACAGGAGGCTGATGAAGATGAATTGGAGGAAGAAGAATCTAATGAAGAGGTGAAGGAAAACAATTTTACGGGCGTTTGCTAGTCTCATGA ATGATTACTGATAAGGGCAAGAAAGCCAAGCACTCTGAAAAGCCCGAAGACGACAATTCGGAGGTCATCGATGAGAAACTCGTTATATCCATCGAGAAATTGCAGGAAATTCAAGACGAGCTCGAGAAGATCAATGAGGAGGCCAGTGATAAAGTCTTGGAAGTGGAACAGAAATACAATGAAGTACGAAAGCCTGTCTACGATAAGCGGAATGAGATCATCAAATCAATTCCCGACTTCTGGTTAACAGCGTTCTTGAGTCATCCTGCTCTTTGTGAACTTTTGACTGAAGAGGACCAGAAGAACTTCAACACCAACCCTTATTTTGAAGATACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACAAGGAAAATTAATGCTACATCCATAAAATGGAAAGAGGGAATGGGTTTACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGACCTCAGGCTGAGGAAAGCTTTTTTAGCTGGTTCAGCGATACAGAACAGAAAGATATTGATGACTTTCATGATGAGGTTGCAGAAATTATCAAGGAGGACTTATGGCCTAACCCTTTATCCTACTTCAATAATGAGGCTGATGAAGATGAATTGGAGGAAGAAGAATCTAATGAAGAGCAATTTTACGGGCGTTTGCTAGTCTCATGA ATGATTACTGATAAGGGCAAGAAAGCCAAGCACTCTGAAAAGCCCGAAGACGACAATTCGGAGGTCATCGATGAGAAACTCGTTATATCCATCGAGAAATTGCAGGAAATTCAAGACGAGCTCGAGAAGATCAATGAGGAGGCCAGTGATAAAGTCTTGGAAGTGGAACAGAAATACAATGAAGTACGAAAGCCTGTCTACGATAAGCGGAATGAGATCATCAAATCAATTCCCGACTTCTGGTTAACAGCGTTCTTGAGTCATCCTGCTCTTTGTGAACTTTTGACTGAAGAGGACCAGAAGAACTTCAACACCAACCCTTATTTTGAAGATACAAAGCTGACGAAGACCTTCACCTTTCTTGATGAAGGAACAAGGAAAATTAATGCTACATCCATAAAATGGAAAGAGGGAATGGGTTTACCTAATGGGTTTAACCATGAGAAGAAAGGGAACAAACGACCTCAGGCTGAGGAAAGCTTTTTTAGCTGGTTCAGCGATACAGAACAGAAAGATATTGATGACTTTCATGATGAGGTTGCAGAAATTATCAAGGAGGACTTATGGCCTAACCCTTTATCCTACTTCAATAATGAGGCTGATGAAGATGAATTGGAGGAAGAAGAATCTAATGAAGAGCAATTTTACGGGCGTTTGCTAGTCTCATGA MITDKGKKAKHSEKPEDDNSEVIDEKLVISIEKLQEIQDELEKINEEASDKVLEVEQKYNEVRKPVYDKRNEIIKSIPDFWLTAFLSHPALCELLTEEDQKNFNTNPYFEDTKLTKTFTFLDEGTRKINATSIKWKEGMGLPNGFNHEKKGNKRPQAEESFFSWFSDTEQKDIDDFHDEVAEIIKEDLWPNPLSYFNNEADEDELEEEESNEEQFYGRLLVS Homology
BLAST of HG10020556 vs. NCBI nr
Match: XP_022949102.1 (NAP1-related protein 2-like [Cucurbita moschata] >XP_023525724.1 NAP1-related protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108 Identity = 208/237 (87.76%), Postives = 211/237 (89.03%), Query Frame = 0
BLAST of HG10020556 vs. NCBI nr
Match: TYJ98882.1 (NAP1-related protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 402.9 bits (1034), Expect = 1.8e-108 Identity = 211/242 (87.19%), Postives = 213/242 (88.02%), Query Frame = 0
BLAST of HG10020556 vs. NCBI nr
Match: KAG6607441.1 (NAP1-related protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037098.1 NAP1-related protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 402.1 bits (1032), Expect = 3.0e-108 Identity = 207/237 (87.34%), Postives = 211/237 (89.03%), Query Frame = 0
BLAST of HG10020556 vs. NCBI nr
Match: XP_011649718.1 (NAP1-related protein 2 [Cucumis sativus] >KGN63994.2 hypothetical protein Csa_013089 [Cucumis sativus]) HSP 1 Score: 401.4 bits (1030), Expect = 5.2e-108 Identity = 209/237 (88.19%), Postives = 212/237 (89.45%), Query Frame = 0
BLAST of HG10020556 vs. NCBI nr
Match: XP_008441189.1 (PREDICTED: NAP1-related protein 2 [Cucumis melo]) HSP 1 Score: 400.6 bits (1028), Expect = 8.9e-108 Identity = 209/237 (88.19%), Postives = 211/237 (89.03%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy Swiss-Prot
Match: Q8LC68 (NAP1-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=NRP2 PE=1 SV=2) HSP 1 Score: 289.3 bits (739), Expect = 3.8e-77 Identity = 155/240 (64.58%), Postives = 182/240 (75.83%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy Swiss-Prot
Match: Q9CA59 (NAP1-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 5.4e-76 Identity = 150/241 (62.24%), Postives = 184/241 (76.35%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy Swiss-Prot
Match: Q69JW2 (NAP1-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0576700 PE=2 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 7.1e-68 Identity = 148/247 (59.92%), Postives = 175/247 (70.85%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy Swiss-Prot
Match: B8AEC1 (NAP1-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07785 PE=2 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.1e-67 Identity = 148/247 (59.92%), Postives = 174/247 (70.45%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy Swiss-Prot
Match: A2XU85 (NAP1-related protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.3 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.9e-58 Identity = 129/244 (52.87%), Postives = 162/244 (66.39%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy TrEMBL
Match: A0A6J1GB40 (NAP1-related protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452557 PE=3 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 6.6e-109 Identity = 208/237 (87.76%), Postives = 211/237 (89.03%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy TrEMBL
Match: A0A5D3BGI8 (NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00780 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 8.6e-109 Identity = 211/242 (87.19%), Postives = 213/242 (88.02%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy TrEMBL
Match: A0A5A7T3L8 (NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00690 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.3e-108 Identity = 209/237 (88.19%), Postives = 211/237 (89.03%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy TrEMBL
Match: A0A1S3B3H8 (NAP1-related protein 2 OS=Cucumis melo OX=3656 GN=LOC103485375 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.3e-108 Identity = 209/237 (88.19%), Postives = 211/237 (89.03%), Query Frame = 0
BLAST of HG10020556 vs. ExPASy TrEMBL
Match: A0A6J1K926 (NAP1-related protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111493377 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.6e-108 Identity = 207/237 (87.34%), Postives = 210/237 (88.61%), Query Frame = 0
BLAST of HG10020556 vs. TAIR 10
Match: AT1G74560.1 (NAP1-related protein 1 ) HSP 1 Score: 285.4 bits (729), Expect = 3.9e-77 Identity = 150/241 (62.24%), Postives = 184/241 (76.35%), Query Frame = 0
BLAST of HG10020556 vs. TAIR 10
Match: AT1G18800.1 (NAP1-related protein 2 ) HSP 1 Score: 284.6 bits (727), Expect = 6.6e-77 Identity = 155/241 (64.32%), Postives = 182/241 (75.52%), Query Frame = 0
BLAST of HG10020556 vs. TAIR 10
Match: AT1G74560.2 (NAP1-related protein 1 ) HSP 1 Score: 280.8 bits (717), Expect = 9.5e-76 Identity = 150/242 (61.98%), Postives = 184/242 (76.03%), Query Frame = 0
BLAST of HG10020556 vs. TAIR 10
Match: AT1G74560.3 (NAP1-related protein 1 ) HSP 1 Score: 260.8 bits (665), Expect = 1.0e-69 Identity = 139/216 (64.35%), Postives = 164/216 (75.93%), Query Frame = 0
BLAST of HG10020556 vs. TAIR 10
Match: AT2G19480.1 (nucleosome assembly protein 1;2 ) HSP 1 Score: 69.7 bits (169), Expect = 3.3e-12 Identity = 70/268 (26.12%), Postives = 118/268 (44.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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