HG10012231 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTGCCTAACATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGAATAATCATGGTTATGAAACCCCCTCTAGTAGAGGCAAATCATGTTGCCTATACGTCCCGCGGAGGTGGTCGGCCGAATTGACTCCCCCGTCGTACGAGTCGATTAAAATCGACGACGATATTAGCTCTTCTTCGCACAAGAAGGCCAAGACTCGCCGCATTCATAGTGACTGTAGCGGGAACGAGCCGAGGTTGGTGAGGAGCTCGGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGGGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGA ATGAATTGCCTAACATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGAATAATCATGGTTATGAAACCCCCTCTAGTAGAGGCAAATCATGTTGCCTATACGTCCCGCGGAGGTGGTCGGCCGAATTGACTCCCCCGTCGTACGAGTCGATTAAAATCGACGACGATATTAGCTCTTCTTCGCACAAGAAGGCCAAGACTCGCCGCATTCATAGTGACTGTAGCGGGAACGAGCCGAGGTTGGTGAGGAGCTCGGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGGGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGA ATGAATTGCCTAACATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGAATAATCATGGTTATGAAACCCCCTCTAGTAGAGGCAAATCATGTTGCCTATACGTCCCGCGGAGGTGGTCGGCCGAATTGACTCCCCCGTCGTACGAGTCGATTAAAATCGACGACGATATTAGCTCTTCTTCGCACAAGAAGGCCAAGACTCGCCGCATTCATAGTGACTGTAGCGGGAACGAGCCGAGGTTGGTGAGGAGCTCGGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGGGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGA MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFEDLGLRDQKKGRFH Homology
BLAST of HG10012231 vs. NCBI nr
Match: XP_038887010.1 (uncharacterized protein LOC120077178 [Benincasa hispida]) HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47 Identity = 97/108 (89.81%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of HG10012231 vs. NCBI nr
Match: KGN60385.1 (hypothetical protein Csa_002007 [Cucumis sativus]) HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43 Identity = 94/112 (83.93%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of HG10012231 vs. NCBI nr
Match: XP_031737602.1 (uncharacterized protein LOC116402474 [Cucumis sativus]) HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43 Identity = 94/112 (83.93%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of HG10012231 vs. NCBI nr
Match: XP_008465978.2 (PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo] >TYK31168.1 uncharacterized protein E5676_scaffold455G004480 [Cucumis melo var. makuwa]) HSP 1 Score: 181.8 bits (460), Expect = 3.1e-42 Identity = 93/111 (83.78%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of HG10012231 vs. NCBI nr
Match: KAA0038574.1 (uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]) HSP 1 Score: 181.8 bits (460), Expect = 3.1e-42 Identity = 93/111 (83.78%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of HG10012231 vs. ExPASy TrEMBL
Match: A0A0A0LEC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902280 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43 Identity = 94/112 (83.93%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of HG10012231 vs. ExPASy TrEMBL
Match: A0A5A7T546 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001040 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42 Identity = 93/111 (83.78%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of HG10012231 vs. ExPASy TrEMBL
Match: A0A5D3E5T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004480 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42 Identity = 93/111 (83.78%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of HG10012231 vs. ExPASy TrEMBL
Match: A0A1S3CRL3 (uncharacterized protein LOC103503546 OS=Cucumis melo OX=3656 GN=LOC103503546 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42 Identity = 93/111 (83.78%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of HG10012231 vs. ExPASy TrEMBL
Match: A0A6J1DZN2 (uncharacterized protein LOC111026067 OS=Momordica charantia OX=3673 GN=LOC111026067 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.5e-31 Identity = 83/125 (66.40%), Postives = 87/125 (69.60%), Query Frame = 0
BLAST of HG10012231 vs. TAIR 10
Match: AT5G46770.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 7.3e-13 Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = 0
BLAST of HG10012231 vs. TAIR 10
Match: AT2G35215.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46770.1); Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 31/97 (31.96%), Postives = 48/97 (49.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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