Cucsat.G17089 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G17089
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1
Location	ctg2607: 436867 .. 438247 (-)
RNA-Seq Expression	Cucsat.G17089
Synteny	Cucsat.G17089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTCCTTTCAAATTTTCTCTTCCCTCTGCACTTTTCCTCTTCTATTTCGTCATAAAGGTATGTTTTTCTAAAAATCGTGGACGGGGTATACGATTTTGTTGTTAAAATTATTTTATTTTATTATTATGTTGATAAAATAATTTATTTTTTGTTGTAGGCTTCCCCTATCCTCCATTGTCTCCTATCCTCCATTGTCTCATTCATCTTCACAAGGTATGTTTATTCTAACCCTAATTTTATTTAGATTTGTTATTTTATTTTCTTATTTTGTGGATTTAGTTAGGTTATTTTGAATTTAGTTAGGTTATTTTGAATTTAGTTATGTTTTTTTTAATTTAGTTATGTTTTTTTGAATTTAGTTATGTTTTTTTGAATTTTGTTATATTTTTGAATTTAGTTATATTTTTTAATGTAGTTATATATTTGAATTTTGTTATATCTTTTGAGTTTTGTTATATGCCTTGAATTTTGTTATATTTTTTCTCAATTTTGTTATTTTTTAACTTTATTAATAATAATAATAATTATTATTATTAAAAATAATAATTATTAATAAAAATCAAAACCTAACCTAATTAATGTTAAATGTACTTTTTTTCCCGATTGATTTGACTAATAATAATAATAATAATCATAATAAAATTATTATTATTATTATTATTATTATTATTAATTATTAATAAAAATCAAAACCTAACCTAATTAATGTTAAATGTACTTTTTTTTCTTTCCCGATTGATTTGACTAATAATAATAATAATTATTATTATTATTATTATTAAAAATAATAATTATTAAAAAAAATCAAAACCTAACCTAATTAATGTTAAATGTACTTTTTTTTTCTTTCCCAATTGATTTGACTAATAGTAATAATAATAAAATAATAAAAATAATCTTGATTTGACTAATAATAAAAAAATAATAGTAAAAATAATAATGATTTTATTAATAATAATTATTATTGGGGTTATTATTAAAAAATACAATTATTAATAAAAATCTAAAAGGAAAACCATATCAATATTGATCGGCTGATCAACACTCAGGTAGTAAAATATTATATCAATATTGCGTAGGCATGTTTTTGTTGTTTCCTTATGTTCGTTTTTTTTAACAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCCACGTCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATA

Coding sequence (CDS)

TTTTCCTTTCAAATTTTCTCTTCCCTCTGCACTTTTCCTCTTCTATTTCGTCATAAAGGCTTCCCCTATCCTCCATTGTCTCCTATCCTCCATTGTCTCATTCATCTTCACAAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCCACGTCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATA

Protein sequence

FSFQIFSSLCTFPLLFRHKGFPYPPLSPILHCLIHLHKINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHI

Homology

[Close]

BLAST of Cucsat.G17089 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-18
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           ++ W PYT  ++A +P  C +G+ +W  V P+ICF +VE H+ DRVLRQF + Q  P  C
Sbjct: 318 QVIWQPYTPDLLAKIPLICVSGENIWRTVAPLICFDVVEWHRPDRVLRQFGLHQTIPAPC 377

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 125
             ++ LH ID RGK + DWS  H+ HI
Sbjct: 378 DNEKALHAIDKRGKSEYDWSARHSRHI 404

[Close]

BLAST of Cucsat.G17089 vs. NCBI nr
Match: KGN65336.2 (hypothetical protein Csa_017779 [Cucumis sativus])

HSP 1 Score: 197 bits (502), Expect = 8.22e-62
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC
Sbjct: 16  QINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 75

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
           STDQGLHQIDLRGKHDQDWSRIHAEHI
Sbjct: 76  STDQGLHQIDLRGKHDQDWSRIHAEHI 102

[Close]

BLAST of Cucsat.G17089 vs. NCBI nr
Match: XP_031736093.1 (serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus])

HSP 1 Score: 193 bits (491), Expect = 3.81e-61
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYTSHIMALLP QCHN QAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC
Sbjct: 16  QINWTPYTSHIMALLPHQCHNSQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 75

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
           STDQGLHQIDLRGKHDQDWSRIHAEHI
Sbjct: 76  STDQGLHQIDLRGKHDQDWSRIHAEHI 102

[Close]

BLAST of Cucsat.G17089 vs. NCBI nr
Match: XP_031739461.1 (serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus])

HSP 1 Score: 197 bits (502), Expect = 5.56e-60
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC
Sbjct: 158 QINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 217

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
           STDQGLHQIDLRGKHDQDWSRIHAEHI
Sbjct: 218 STDQGLHQIDLRGKHDQDWSRIHAEHI 244

[Close]

BLAST of Cucsat.G17089 vs. NCBI nr
Match: XP_031736497.1 (serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus])

HSP 1 Score: 192 bits (489), Expect = 8.29e-60
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYTSHIMAL PRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC
Sbjct: 104 QINWTPYTSHIMALFPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 163

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
           STDQGLHQIDLRGKHDQ WSRIHAEHI
Sbjct: 164 STDQGLHQIDLRGKHDQYWSRIHAEHI 190

[Close]

BLAST of Cucsat.G17089 vs. NCBI nr
Match: XP_031739640.1 (serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus])

HSP 1 Score: 192 bits (488), Expect = 1.88e-59
Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYTSHIM LLP QCH+GQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC
Sbjct: 16  QINWTPYTSHIMTLLPHQCHSGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 75

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
           STDQGLHQIDLRGKHDQDWSRIHAEHI
Sbjct: 76  STDQGLHQIDLRGKHDQDWSRIHAEHI 102

[Close]

BLAST of Cucsat.G17089 vs. ExPASy TrEMBL
Match: A0A5A7TPE7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003010 PE=4 SV=1)

HSP 1 Score: 155 bits (393), Expect = 1.47e-44
Identity = 68/87 (78.16%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYT  IMA LP +C +GQA+WTYVGP+ICFHLVEKHQ DRVLRQF+MLQMPP   
Sbjct: 84  QINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQMPPAIS 143

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
            TDQ LHQIDLRGKHDQDW +IHAEHI
Sbjct: 144 YTDQRLHQIDLRGKHDQDWRQIHAEHI 170

[Close]

BLAST of Cucsat.G17089 vs. ExPASy TrEMBL
Match: A0A5A7UKU7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00240 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 9.43e-43
Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYT  IMA LP +C +GQA+WTYVGP+ICFHLVEKHQ DRVLRQF+MLQ PP   
Sbjct: 274 QINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAIS 333

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
            TDQ LHQIDLRGKHDQDW RIHAEHI
Sbjct: 334 YTDQRLHQIDLRGKHDQDWRRIHAEHI 360

[Close]

BLAST of Cucsat.G17089 vs. ExPASy TrEMBL
Match: A0A5D3BQW5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00920 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 1.01e-42
Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYT  IMA LP +C +GQA+WTYVGP+ICFHLVEKHQ DRVLRQF+MLQ PP   
Sbjct: 245 QINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAIS 304

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
            TDQ LHQIDLRGKHDQDW RIHAEHI
Sbjct: 305 YTDQRLHQIDLRGKHDQDWRRIHAEHI 331

[Close]

BLAST of Cucsat.G17089 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 2.36e-42
Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYT  IMA LP +C +GQA+WTYVGP+ICFHLVEKHQ DRVLRQF+MLQ PP   
Sbjct: 296 QINWTPYTPDIMASLPVRCQSGQAVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAIS 355

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
            TDQ LHQIDLRGKHDQDW RIHAEHI
Sbjct: 356 YTDQRLHQIDLRGKHDQDWRRIHAEHI 382

[Close]

BLAST of Cucsat.G17089 vs. ExPASy TrEMBL
Match: A0A5A7SRW3 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001270 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 3.77e-42
Identity = 66/87 (75.86%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 38  KINWTPYTSHIMALLPRQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFC 97
           +INWTPYT  IMA LP +C +GQ +WTYVGP+ICFHLVEKHQ DRVLRQF+MLQ PP   
Sbjct: 241 QINWTPYTPDIMASLPVRCQSGQEVWTYVGPLICFHLVEKHQPDRVLRQFNMLQTPPAIS 300

Query: 98  STDQGLHQIDLRGKHDQDWSRIHAEHI 124
            TDQ LHQIDLRGKHD+DW RIHAEHI
Sbjct: 301 YTDQRLHQIDLRGKHDEDWRRIHAEHI 327

The following BLAST results are available for this feature:

BLAST of Cucsat.G17089 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	1.7e-18	45.98	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of Cucsat.G17089 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65336.2	8.22e-62	98.85	hypothetical protein Csa_017779 [Cucumis sativus]	[more]
XP_031736093.1	3.81e-61	96.55	serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]	[more]
XP_031739461.1	5.56e-60	98.85	serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]	[more]
XP_031736497.1	8.29e-60	96.55	serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]	[more]
XP_031739640.1	1.88e-59	95.40	serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]	[more]

BLAST of Cucsat.G17089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPE7	1.47e-44	78.16	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7UKU7	9.43e-43	78.16	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5D3BQW5	1.01e-42	78.16	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7TSW1	2.36e-42	78.16	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]
A0A5A7SRW3	3.77e-42	75.86	Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 37..112 e-value: 2.1E-9 score: 37.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G17089.T1	Cucsat.G17089.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity