Csor.00g176090 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCTTCGACGCCCGAATTTCAAGCTGGTGATGAGAGAATCAAGATCCTGATCTTCCATAACGTATCGGCTGCTTCAGCTCTATTGATCGGCGTGCTTCTTGCAGTCGATTTTATCTTGAATCGACCGATTTGATCTTCGTTCTCATGGCGATAATCTATGCGCTGGTGGCGAGGGGGTCGGTGGTTTTGGCTGAATTTTATGTAACTCCGACGAATGCAAGCTCGATTTCTCGCCAAATACTCGATAAAATTCCGGGAAACGATGATTCTCATGTTTCCTACTCGCAGGATCGGTATATCTTTCACGTCAAGCGTACCGATGGCCTTACGGTGCTCTGCATGGCCGATGACACTGCCGGAAGTGAGTATCAATCTCTCTGTTCGTATGAATTTTTCCTCTGTCGTCTCGTTAATGAGGATAGGGTGTATTGATGCGTTGTGCAATTGAGTAGTCTGGTGCTAATTATTGGATAATTTTTTTTTGTTTTAGATGGCCAATGCTAATTATTTAACACTGTATAGTCGGATCATTTAGTTGCATATCACAGCATATCGTTGATTTCTAAAATTGGCGGGAGACCGAGAATAGAGCCCTCTAGTTCTAAGACGGGGAGTAGGCAGATGTGCGTTGCTATGTTAACTTTAATGATGGGTTATTTCATAGACTATGCGTCGTTCTTCAAGATATCTGTTGATTTAGTAGTTTCGTTTCTTCACTATTTGTTGTTTGCATATTGCTGGATCTGTGTGGATAGTCGATGGAGTTTGGATGGCATTTGTGTATCTATATTGAACCTGGATGATATTTTCCGTGATTTTCAATTCATTTACGTAACATCAAAATGGTTAGCGTGAGGATGCTTGCTGCTTTGTAAAATATACCGCCATGAAGAATAAAATGTTTATCAATCTTAGTCGGCTTCGTCCCACCCACAAGTGAAGCCAATCATATAATAATCTTTCTGCAGCAAGTCATCTTTGAAACCCAACTCATTCACACAGTAGAATCAAGCAACGATTTTTTTGTTGTACTGACAATGACAACCCATATTCTTCAGGGAGGATTCCTTTTGCATTCCTGGAAGATATTCATCAGAGATTTGTAAGGACATATGGCCGTGCAGTTCATTCAGCCAATCCTTATGGCATGAACGACGAATTCTCAAGAGTTTTGAGTCAGCAAATGGAATACTACTCCAATGACCCAAACGCCGATAGGATCAACCGGCTGAAAGGTGAAATGAGTCAGGTGATTATCAAAATACTTCAAGGTTTTATTTACATAATCTTATGCCACGCTAAATATCTTAAAGCAGCTATTTGCCTCCTTACATTTCACATAGTCTAGGATGTATGCGCATTCTATAGAATGATGCACAGAATGTTTTTTTTTTAGTTTGTTGCAGTTCTTTTACTTACTGGTGGTCGTTTAGGTCATCAATATACTACCACTTTGTTATCGGACTCAAAATATTATTGTACTTCTTACCAGACTCAGCATAATATTACATATAATATACAAAATTCATCTCAATAATAAAAAAAGAAAGTAGCTTATGTTACTAGAAGGAAGAACAAATTCACCCGAAGAAGTATTCTGAAAATATTGTTCATGAAGAAAAAAATGACAGAGAAAGCCCTGGCGTTCTAATACATAGATAATAGTCTGCTTTGGGATATCATATAAACTTTCACCATAAATGTTTTGCTTCTTTGTTGTGCAACTAGCACATAGTGTCGATAACCAATAGTTATTATGTTTTACAGGTGAGAAATGTCATGATAGAGAATATTGACAAAGTTTTAGAGAGAGGTGACCGATTGGAGCTGCTTGTGGATAAAACTACTAATATGCAAGGAAACACCATGCGATTTAGGAAGCAGTCTCGACGTTTCAGAAACACAGTATGGTGGAAAAATGTTAAGCTCATGTACGTTTCCTCCCCTTCTAAAAAATTATTTTTCCATCAGTACTAACGGTACACTCAGTGTGAGATTGTTCGTGCATTTTCATATTATGTCTGCAATTTGTGATTGAAAATTTAATTATGAAAAACATGTTAAAGATCCTCACTAGTCCAAAATAATTGTATGCGCACATTGTCTGTGTATTTTAGGAAAATGATTTAGGTATTTTAGAAATAAGGATACCTAAATATTTTAGGAATAAATTGTTTGCCTCTCCTATAAATACCCCTTCACCCTACCAAGGTTTTCATCCCAACAAATTCAAAGAGCAAAGCAAAATATAGTAGTATTCTACAACGTGTCTTGAAATCTCTTCTCGATTGATCATAATAAAGAGTGCAACTGTTTCCCCTACCAAGGTTTTCATCCCAACAAATTCAAAGAGCAAAGCAAAATGTTGCAGTATTGTCTTGAAATCTCTTTTCGATTGGTCTTAATAAAGAGTGCAACTGTTTCCCATAACTAAGGTTTTCATCCTAACAAATTCAAAGAGCAAAGCAAAATGTAGCAGTATTGTCTTGAAATCTCTTCTCGATTGGTCTTAATAAAGAGTGCAACTGTTTCCCATAACTAAGGTTTTCATCCCAACAAATTCAAAGAGCAAAGCAAAATGTAGCAGTATTGTCTTGAAATCTCTTCTCGATTGGTCTTAATAAAGAGTGCAACTGTTTCCCATAACTAAGGTTTTCATCCCAATAAATTCAAAGAGCAAAGCAAAATGTAGCAGTATTGTCTTGAAATCTCTTCTCGATTGGTCTTAATAAAGAGTGCAACTGTCTTGAAATCTCTTCTTGATTGGTCTTAATAAAGAGTGCAACTGTTTCCCATAACTAAGGTTTTCATCCCAACAAATTCAAAGAGCAAAGCAAAATGTAGCAGTATTCTACAACGTGTCTTGAAATCTCTTCTCGATTGGTCTTAATAAAGATGGGTCTTAATAAAGATTGCAACTGTTTCCCTAATTAACAAAAACATGTTTGCCTTTAGCGGCTAAATGTTTCCTTGTATGCTTTTCAGTTTCTGCATTTTCATTCTTAGCGGCTAAACGTTTCCTTGTATGCCTTTCAGTTTGTGCACCTTTTACTCCTAGAAGTTTCGTTTAGAAAGCCTCTCAATGTCTTAAAAATGGTGATAATCTGCACCCTGCTGATTAAATGAATGCCTCAAATCTTGCAGGTTAATGCTGATAGTCCTCCTCCTAGTGATTGCTTACTTGGTGCTAGCTTATGTTTGCCATGGAGTGACACTACCTAAGTGCCTATAA ATGATCTTCGACGCCCGAATTTCAAGCTGTCGATTTTATCTTGAATCGACCGATTTGATCTTCGTTCTCATGGCGATAATCTATGCGCTGGTGGCGAGGGGGTCGGTGGTTTTGGCTGAATTTTATGATCGGTATATCTTTCACGTCAAGCGTACCGATGGCCTTACGGTGCTCTGCATGGCCGATGACACTGCCGGAAGGAGGATTCCTTTTGCATTCCTGGAAGATATTCATCAGAGATTTGTAAGGACATATGGCCGTGCAGTTCATTCAGCCAATCCTTATGGCATGAACGACGAATTCTCAAGAGTTTTGAGTCAGCAAATGGAATACTACTCCAATGACCCAAACGCCGATAGGATCAACCGGCTGAAAGGTGAAATGAGTCAGGTGAGAAATGTCATGATAGAGAATATTGACAAAGTTTTAGAGAGAGGTGACCGATTGGAGCTGCTTGTGGATAAAACTACTAATATGCAAGGAAACACCATGCGATTTAGGAAGCAGTCTCGACGTTTCAGAAACACAGTATGGTGGAAAAATGTTAAGCTCATGTTAATGCTGATAGTCCTCCTCCTAGTGATTGCTTACTTGGTGCTAGCTTATGTTTGCCATGGAGTGACACTACCTAAGTGCCTATAA ATGATCTTCGACGCCCGAATTTCAAGCTGTCGATTTTATCTTGAATCGACCGATTTGATCTTCGTTCTCATGGCGATAATCTATGCGCTGGTGGCGAGGGGGTCGGTGGTTTTGGCTGAATTTTATGATCGGTATATCTTTCACGTCAAGCGTACCGATGGCCTTACGGTGCTCTGCATGGCCGATGACACTGCCGGAAGGAGGATTCCTTTTGCATTCCTGGAAGATATTCATCAGAGATTTGTAAGGACATATGGCCGTGCAGTTCATTCAGCCAATCCTTATGGCATGAACGACGAATTCTCAAGAGTTTTGAGTCAGCAAATGGAATACTACTCCAATGACCCAAACGCCGATAGGATCAACCGGCTGAAAGGTGAAATGAGTCAGGTGAGAAATGTCATGATAGAGAATATTGACAAAGTTTTAGAGAGAGGTGACCGATTGGAGCTGCTTGTGGATAAAACTACTAATATGCAAGGAAACACCATGCGATTTAGGAAGCAGTCTCGACGTTTCAGAAACACAGTATGGTGGAAAAATGTTAAGCTCATGTTAATGCTGATAGTCCTCCTCCTAGTGATTGCTTACTTGGTGCTAGCTTATGTTTGCCATGGAGTGACACTACCTAAGTGCCTATAA MIFDARISSCRFYLESTDLIFVLMAIIYALVARGSVVLAEFYDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVRTYGRAVHSANPYGMNDEFSRVLSQQMEYYSNDPNADRINRLKGEMSQVRNVMIENIDKVLERGDRLELLVDKTTNMQGNTMRFRKQSRRFRNTVWWKNVKLMLMLIVLLLVIAYLVLAYVCHGVTLPKCL Homology
BLAST of Csor.00g176090 vs. ExPASy Swiss-Prot
Match: O49377 (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana OX=3702 GN=VAMP711 PE=1 SV=2) HSP 1 Score: 293.9 bits (751), Expect = 1.5e-78 Identity = 151/219 (68.95%), Postives = 176/219 (80.37%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy Swiss-Prot
Match: Q9LFP1 (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana OX=3702 GN=VAMP713 PE=1 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 4.7e-77 Identity = 147/219 (67.12%), Postives = 173/219 (79.00%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy Swiss-Prot
Match: Q9SIQ9 (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana OX=3702 GN=VAMP712 PE=2 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 1.8e-76 Identity = 147/219 (67.12%), Postives = 172/219 (78.54%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy Swiss-Prot
Match: Q9FMR5 (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana OX=3702 GN=VAMP714 PE=1 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.0e-59 Identity = 112/219 (51.14%), Postives = 157/219 (71.69%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy Swiss-Prot
Match: Q86AQ7 (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum OX=44689 GN=vamp7B PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37 Identity = 85/212 (40.09%), Postives = 130/212 (61.32%), Query Frame = 0
BLAST of Csor.00g176090 vs. NCBI nr
Match: KAG6591562.1 (Vesicle-associated membrane protein 713, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 415 bits (1066), Expect = 5.62e-146 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Csor.00g176090 vs. NCBI nr
Match: KAG7024451.1 (Vesicle-associated membrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357 bits (915), Expect = 7.21e-123 Identity = 190/219 (86.76%), Postives = 190/219 (86.76%), Query Frame = 0
BLAST of Csor.00g176090 vs. NCBI nr
Match: XP_022935768.1 (vesicle-associated membrane protein 711-like [Cucurbita moschata]) HSP 1 Score: 355 bits (910), Expect = 4.17e-122 Identity = 189/219 (86.30%), Postives = 190/219 (86.76%), Query Frame = 0
BLAST of Csor.00g176090 vs. NCBI nr
Match: XP_023534904.1 (vesicle-associated membrane protein 711-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 353 bits (907), Expect = 1.19e-121 Identity = 188/219 (85.84%), Postives = 189/219 (86.30%), Query Frame = 0
BLAST of Csor.00g176090 vs. NCBI nr
Match: XP_022976195.1 (vesicle-associated membrane protein 711-like [Cucurbita maxima]) HSP 1 Score: 351 bits (901), Expect = 9.79e-121 Identity = 187/219 (85.39%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy TrEMBL
Match: A0A6J1FBF4 (vesicle-associated membrane protein 711-like OS=Cucurbita moschata OX=3662 GN=LOC111442591 PE=3 SV=1) HSP 1 Score: 355 bits (910), Expect = 2.02e-122 Identity = 189/219 (86.30%), Postives = 190/219 (86.76%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy TrEMBL
Match: A0A6J1IIT7 (vesicle-associated membrane protein 711-like OS=Cucurbita maxima OX=3661 GN=LOC111476658 PE=3 SV=1) HSP 1 Score: 351 bits (901), Expect = 4.74e-121 Identity = 187/219 (85.39%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy TrEMBL
Match: A0A0A0LH93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876590 PE=3 SV=1) HSP 1 Score: 342 bits (878), Expect = 1.51e-117 Identity = 181/219 (82.65%), Postives = 187/219 (85.39%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy TrEMBL
Match: A0A6J1J3R6 (vesicle-associated membrane protein 711-like OS=Cucurbita maxima OX=3661 GN=LOC111481064 PE=3 SV=1) HSP 1 Score: 342 bits (877), Expect = 2.15e-117 Identity = 181/219 (82.65%), Postives = 187/219 (85.39%), Query Frame = 0
BLAST of Csor.00g176090 vs. ExPASy TrEMBL
Match: A0A6J1FKX1 (vesicle-associated membrane protein 711-like OS=Cucurbita moschata OX=3662 GN=LOC111446678 PE=3 SV=1) HSP 1 Score: 342 bits (876), Expect = 3.05e-117 Identity = 181/219 (82.65%), Postives = 187/219 (85.39%), Query Frame = 0
BLAST of Csor.00g176090 vs. TAIR 10
Match: AT4G32150.1 (vesicle-associated membrane protein 711 ) HSP 1 Score: 293.9 bits (751), Expect = 1.0e-79 Identity = 151/219 (68.95%), Postives = 176/219 (80.37%), Query Frame = 0
BLAST of Csor.00g176090 vs. TAIR 10
Match: AT5G11150.1 (vesicle-associated membrane protein 713 ) HSP 1 Score: 288.9 bits (738), Expect = 3.4e-78 Identity = 147/219 (67.12%), Postives = 173/219 (79.00%), Query Frame = 0
BLAST of Csor.00g176090 vs. TAIR 10
Match: AT2G25340.1 (vesicle-associated membrane protein 712 ) HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77 Identity = 147/219 (67.12%), Postives = 172/219 (78.54%), Query Frame = 0
BLAST of Csor.00g176090 vs. TAIR 10
Match: AT5G22360.1 (vesicle-associated membrane protein 714 ) HSP 1 Score: 230.3 bits (586), Expect = 1.4e-60 Identity = 112/219 (51.14%), Postives = 157/219 (71.69%), Query Frame = 0
BLAST of Csor.00g176090 vs. TAIR 10
Match: AT1G04750.2 (vesicle-associated membrane protein 721 ) HSP 1 Score: 119.0 bits (297), Expect = 4.6e-27 Identity = 65/184 (35.33%), Postives = 114/184 (61.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|