CsaV3_6G050650 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G050650
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 29532301 .. 29533076 (+)
RNA-Seq ExpressionCsaV3_6G050650
SyntenyCsaV3_6G050650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAACGTGTTCATATTTTATCAAAGAAAACCAGAGAGGAAAATAAAAAATGTAGAAGCCATTTGTTTTCTGTATGTAATTTCTGATGATGTTCATTCATTGAGTGGTGTGAGGTAATGTATTATTGGCATGCAGACTGATCCCCGTGTCATTATTTCTTATATGTCCTTTCCTTTTTCTTGTTATGTATATTTGAAAGAAAAAGAAAGTATTACCTAAGTTATAATGTATATGATACGAACAGTGTTGATGATTTTGACATTATTTGGTAGCTTGAGATTGCTATATAACCTCCATAAATGGTTTCAAATCTTTCTTTTCCTGTATCTAAACAACCATAATGAAAACAAAGAAACTTTTGTATGGTAATCTAGTCACGTTCAAATTCCTCCGTGTAAAGTTATGATCTGTTACAACACCTGTTCTCCTTTGCGATCCATGTTCGTGAAGATGCAATAAGTGAATAGTGAGCCAATTCTCAGAGTTACCTTTTGAATATTCACGGTTCATGTTAGGTATTTTAACGTGTCACGTAAACAGTGGAAATAGCCATTTATTAATAGCCATTTATGAACTTTTTTCGAGAAAGAGAAGAAAAAGGAAAGCTTTTGAGTTTCCACGTTCTTTCTTCCAATCGCAGAGGCCAGAATCAAACTCCTCATACAAACCAATGCCTAAAGCTAGAGAAGGCCAAAAACCCACCAATTGTTGTCGGTAACGGATTGTCTCATTTATTTGATGATTTATTCGTGAAGAAATTTGAAGGGCTTTAA

mRNA sequence

ATGCAAAACGTGTTCATATTTTATCAAAGAAAACCAGAGAGGAAAATAAAAAATGTAGAAGCCATTTGTTTTCTGTATGTAATTTCTGATGATGTTCATTCATTGAGTGGTGTGAGAGGCCAGAATCAAACTCCTCATACAAACCAATGCCTAAAGCTAGAGAAGGCCAAAAACCCACCAATTGTTGTCGGTAACGGATTGTCTCATTTATTTGATGATTTATTCGTGAAGAAATTTGAAGGGCTTTAA

Coding sequence (CDS)

ATGCAAAACGTGTTCATATTTTATCAAAGAAAACCAGAGAGGAAAATAAAAAATGTAGAAGCCATTTGTTTTCTGTATGTAATTTCTGATGATGTTCATTCATTGAGTGGTGTGAGAGGCCAGAATCAAACTCCTCATACAAACCAATGCCTAAAGCTAGAGAAGGCCAAAAACCCACCAATTGTTGTCGGTAACGGATTGTCTCATTTATTTGATGATTTATTCGTGAAGAAATTTGAAGGGCTTTAA

Protein sequence

MQNVFIFYQRKPERKIKNVEAICFLYVISDDVHSLSGVRGQNQTPHTNQCLKLEKAKNPPIVVGNGLSHLFDDLFVKKFEGL*
Homology
[Close]
BLAST of CsaV3_6G050650 vs. NCBI nr
Match: KAE8647708.1 (hypothetical protein Csa_003633 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 2.3e-40
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MQNVFIFYQRKPERKIKNVEAICFLYVISDDVHSLSGVRGQNQTPHTNQCLKLEKAKNPP 60
          MQNVFIFYQRKPERKIKNVEAICFLYVISDDVHSLSGVRGQNQTPHTNQCLKLEKAKNPP
Sbjct: 1  MQNVFIFYQRKPERKIKNVEAICFLYVISDDVHSLSGVRGQNQTPHTNQCLKLEKAKNPP 60

Query: 61 IVVGNGLSHLFDDLFVKKFEGL 83
          IVVGNGLSHLFDDLFVKKFEGL
Sbjct: 61 IVVGNGLSHLFDDLFVKKFEGL 82

The following BLAST results are available for this feature:
BLAST of CsaV3_6G050650 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647708.12.3e-40100.00hypothetical protein Csa_003633 [Cucumis sativus][more]
BLAST of CsaV3_6G050650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G050650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G050650 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G050650.1CsaV3_6G050650.1mRNA