CsaV3_6G046980 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CACAATGGTGAAAGATAGTGGTTTTTTTACCTTGTTCTGGATAAATGGGCCTGGGATTCAACATTATAGCGGGCTAGTGGCCCAGACCTGATGTTGCTAAATTTTGGAGTCCATTATGTCTAAAATGAAGACTCAATTGCTCGAACTGTCCGCCTGTATTGCAGATTGTGATGGCTCTTTTGCAGACAACAATCTGCCTTCGTATTTCCACCATCATCTTCTTCCTCGTCTTTCTCCTTTCCGAGAAATCTCATTGTATCAGAATTCCGAATCGAATTGTTGAACCTATTAAGACTACTTCAAGCCATCAGTCCTTGAAAACCGCAGTTTTTGCTCTTGGAAGTTTCTGGAGATCCGAAGCTGTCTTCGGTTGCTTGGATGGAGTTGTCCGGACCACCGTCGGCTATGCCGGTGGTACTAAACACAATCCTGAGTACCGTAGCTTGGGGGATCACGCCGAGTCTGTTCGGGTTTGTACTCTTACCTTCTCTTCTCTTCTCTTCTCCTTTTCATTTCTTATTTTTTTGATTGCTTAATTTTCACTTTTCATTTTGTGAATTTTCTGTACTCTACATTTCGGATGGTGTTGCTGATGTCATTATTTCGGTAGATCCTGTTTGTACGTTTGGTCGTATTGTTTGTTTACCTTTTTGATATTGTTTTGCTTTCTTGATCGGATTTATTGTCTTGGAAATCTCCTTGTGCGAGGCAGTGATGAGGTTTGAATGTCCTGACATTTGGTGGTATGTAGAATTTGTTTGTCGCAGATCTCTGATGTGAAAATGGACTGAATCCAGTTTTCTTTTTTGTCGACGACTTGTCAGTGCTTGGGATAGGATTTGTTAATAACTTCGGTATAAATCGTCTTGTCTATTTATGCACCTACGACCAACCAATCAAATGAGGCATTCATTTACGTGCATTTAAGAAATTGTTAGATTGAAGTTGCATGTTCTGTAAAATTTTGAATTCAACGGTGCCTTCACTTAATCCTAGATAAGTTTGTTGTATTCTATTGTGGTGACGAAATTACTTGAGGAACCGCCCTTCATGATAAATGCTTCAATCTGTAGATATCATTGGTGGACCATGGAGTATTTCAAGTTACAAAATTTGAATCATTTGTTGATATATATTGGTTCTGAAAAAGTTTCGTTTTGGGTTTCCTTACATTACATCAATGTTTTGATGTGATTGAGTTTTTTATCATATGCTTTGTAATTCTTTGCAGGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTGTTAGAGGTTTTTTGGTCCAGTCATGATTCGAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGGTATGCTATTTATAAATTCTAGCTCATAATTTAGTCGAAATCAACCTTTGATAATGGTGTTATGTATTCTTTTGTATCAGATCTATCATTTTTACTATTAATGATACTGAGGAATCTAGACTGGCTACTGTTAGCAAAGAAAAAGAGCAACTGAAGTCAAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGCCTGAACATCAGGTTAATACCATTGATTAATGTAATCCTTTGAGGCAATTTTGTGGAGAAATTTCAGATTTTAAGATATCCTGGTTCTTGACATGCAACTCACCTAGAACATTACAAGTTAAGATAGATTGAGACATCTTTGGTCTTTGCCTACTTTGTAAGTTGCTACCCTCTGCCCCACTTTTCCGACTTGAAGCTGAAGTAAGCAAGGTTGTGATGTCTGTAGTCTTTTTGGTACTTTACGAATTGCAACCTCCTAAACCCCTCTCCCATTTGAAAGATGAAGTGCATCTCATTTCTAGAAATGGATGATCCATTTCGAGAGACTTTGTGGTCAAAAGAAGAAAGTTTCAAAATATAACATTCAGGTCTAAAAGTACAGATAGAGCATAGGAAAAAAATGCAAATGTAGCAAAATTTAGATCCAACTCTTATAGCTACAATCTATCGATAATGATCCATCTTGCTAACAAGAGTCTAACACTTACAGGAACCTAATAAGTGATAGAAACTATCACTTGTAGATTTTGCTTTATTTGCAATTCTTTTCAATATTGTTGCGCACTTAATTATTAGTCCTAAAAGTTGCGTCTTTGCAATTACCCTAAAGAAGAATGGACTTGCTGACATATGTATATCTCGCTCACACTGATCTACATATTTACGTGCAGAAATTTGAGCTGAAGAGGAATCCATTTTTTATTCAATTAATGGGTAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAATGGGTACGCCGCAGAGCTATGCCCTCCAAAGACTCAGAAGCAAATCGATGCCAAGATCAACGATATTATCAAGAAAGGATGGCCTATTCTGAGAGAAAAATAACTTCATGTTCTTGCAAACTTCTAGCTTGGTAGCAAACCGATGCTGTTGCATCAGTGTTGGTCTTCTTGTTAGATTGCAGAAGCCCAAATTGTTTGATCATCCATTGAATTTACTCTCTCAGCTTCAATTTTTTTGTAGCTACAAATTTCATTTTTTTGGTTCAAACCCATTATTATGTAGATTGATTACTCCTTACCAATTGGGAATATTTCATTCTTTAAACATTTCGTTTTCCCCGTCTGTCATCAAGAAACTGAGCTATGTTGTACCTCAGTTTCAGATTTAGGGTAACAGAGTATTGAAGATTCAGGCTCACTACCTAAATATACTTATATATATATATATAATACGTTAAAGAGTGAAGAGTGAAGAGAACCAATG ATGGCTCTTTTGCAGACAACAATCTGCCTTCGTATTTCCACCATCATCTTCTTCCTCGTCTTTCTCCTTTCCGAGAAATCTCATTGTATCAGAATTCCGAATCGAATTGTTGAACCTATTAAGACTACTTCAAGCCATCAGTCCTTGAAAACCGCAGTTTTTGCTCTTGGAAGTTTCTGGAGATCCGAAGCTGTCTTCGGTTGCTTGGATGGAGTTGTCCGGACCACCGTCGGCTATGCCGGTGGTACTAAACACAATCCTGAGTACCGTAGCTTGGGGGATCACGCCGAGTCTGTTCGGGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTGTTAGAGGTTTTTTGGTCCAGTCATGATTCGAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTATTAATGATACTGAGGAATCTAGACTGGCTACTGTTAGCAAAGAAAAAGAGCAACTGAAGTCAAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGCCTGAACATCAGAAATTTGAGCTGAAGAGGAATCCATTTTTTATTCAATTAATGGGTAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAATGGGTACGCCGCAGAGCTATGCCCTCCAAAGACTCAGAAGCAAATCGATGCCAAGATCAACGATATTATCAAGAAAGGATGGCCTATTCTGAGAGAAAAATAA ATGGCTCTTTTGCAGACAACAATCTGCCTTCGTATTTCCACCATCATCTTCTTCCTCGTCTTTCTCCTTTCCGAGAAATCTCATTGTATCAGAATTCCGAATCGAATTGTTGAACCTATTAAGACTACTTCAAGCCATCAGTCCTTGAAAACCGCAGTTTTTGCTCTTGGAAGTTTCTGGAGATCCGAAGCTGTCTTCGGTTGCTTGGATGGAGTTGTCCGGACCACCGTCGGCTATGCCGGTGGTACTAAACACAATCCTGAGTACCGTAGCTTGGGGGATCACGCCGAGTCTGTTCGGGTTGAATATGATCCTAAGCTTATTAGTTTTAGGCAACTGTTAGAGGTTTTTTGGTCCAGTCATGATTCGAGGCAAGTGTTTGGGCAAGGTCCTGATGTGGGCAACCAGTATAGATCTATCATTTTTACTATTAATGATACTGAGGAATCTAGACTGGCTACTGTTAGCAAAGAAAAAGAGCAACTGAAGTCAAGAGGAAGTGCTGTAACTACACAAATTCAGGAACTTGGAGCATTTTATCCTGCTGAGCCTGAACATCAGAAATTTGAGCTGAAGAGGAATCCATTTTTTATTCAATTAATGGGTAACTTGCCAGAAGAGGAGCTTGAGATGTCCACTTTGGCAGCAAATATGAATGGGTACGCCGCAGAGCTATGCCCTCCAAAGACTCAGAAGCAAATCGATGCCAAGATCAACGATATTATCAAGAAAGGATGGCCTATTCTGAGAGAAAAATAA MALLQTTICLRISTIIFFLVFLLSEKSHCIRIPNRIVEPIKTTSSHQSLKTAVFALGSFWRSEAVFGCLDGVVRTTVGYAGGTKHNPEYRSLGDHAESVRVEYDPKLISFRQLLEVFWSSHDSRQVFGQGPDVGNQYRSIIFTINDTEESRLATVSKEKEQLKSRGSAVTTQIQELGAFYPAEPEHQKFELKRNPFFIQLMGNLPEEELEMSTLAANMNGYAAELCPPKTQKQIDAKINDIIKKGWPILREK* Homology
BLAST of CsaV3_6G046980 vs. NCBI nr
Match: XP_004134872.1 (peptide methionine sulfoxide reductase A5 [Cucumis sativus] >KGN48901.1 hypothetical protein Csa_003888 [Cucumis sativus]) HSP 1 Score: 504.6 bits (1298), Expect = 5.0e-139 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. NCBI nr
Match: XP_008440803.1 (PREDICTED: peptide methionine sulfoxide reductase A5 [Cucumis melo] >KAA0025687.1 peptide methionine sulfoxide reductase A5 [Cucumis melo var. makuwa] >TYK12562.1 peptide methionine sulfoxide reductase A5 [Cucumis melo var. makuwa]) HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135 Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. NCBI nr
Match: XP_038881316.1 (peptide methionine sulfoxide reductase A5 [Benincasa hispida]) HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129 Identity = 235/252 (93.25%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. NCBI nr
Match: XP_023544873.1 (peptide methionine sulfoxide reductase A5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 455.3 bits (1170), Expect = 3.5e-124 Identity = 231/252 (91.67%), Postives = 235/252 (93.25%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. NCBI nr
Match: KAG6603921.1 (Peptide methionine sulfoxide reductase A5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 452.6 bits (1163), Expect = 2.2e-123 Identity = 230/252 (91.27%), Postives = 235/252 (93.25%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy Swiss-Prot
Match: Q9SL43 (Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana OX=3702 GN=MSRA5 PE=2 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.6e-92 Identity = 164/235 (69.79%), Postives = 198/235 (84.26%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy Swiss-Prot
Match: Q5VPG8 (Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp. japonica OX=39947 GN=MSRA5 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 5.6e-85 Identity = 160/246 (65.04%), Postives = 196/246 (79.67%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy Swiss-Prot
Match: P08761 (Peptide methionine sulfoxide reductase OS=Drosophila melanogaster OX=7227 GN=MsrA PE=1 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 5.5e-32 Identity = 70/173 (40.46%), Postives = 108/173 (62.43%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy Swiss-Prot
Match: Q2RRT3 (Peptide methionine sulfoxide reductase MsrA OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=msrA PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.7e-29 Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy Swiss-Prot
Match: Q6LYY1 (Peptide methionine sulfoxide reductase MsrA OS=Methanococcus maripaludis (strain S2 / LL) OX=267377 GN=msrA PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.2e-28 Identity = 66/152 (43.42%), Postives = 98/152 (64.47%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy TrEMBL
Match: A0A0A0KMD5 (Protein-methionine-S-oxide reductase OS=Cucumis sativus OX=3659 GN=Csa_6G505300 PE=3 SV=1) HSP 1 Score: 504.6 bits (1298), Expect = 2.4e-139 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy TrEMBL
Match: A0A5D3CMK1 (Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001440 PE=3 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 7.2e-136 Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy TrEMBL
Match: A0A1S3B2Q7 (Protein-methionine-S-oxide reductase OS=Cucumis melo OX=3656 GN=LOC103485114 PE=3 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 7.2e-136 Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy TrEMBL
Match: A0A6J1IPP3 (Protein-methionine-S-oxide reductase OS=Cucurbita maxima OX=3661 GN=LOC111478806 PE=3 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123 Identity = 230/252 (91.27%), Postives = 234/252 (92.86%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. ExPASy TrEMBL
Match: A0A6J1GGV0 (Protein-methionine-S-oxide reductase OS=Cucurbita moschata OX=3662 GN=LOC111453785 PE=3 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.5e-122 Identity = 228/252 (90.48%), Postives = 234/252 (92.86%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. TAIR 10
Match: AT2G18030.1 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 340.5 bits (872), Expect = 1.2e-93 Identity = 164/235 (69.79%), Postives = 198/235 (84.26%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. TAIR 10
Match: AT2G18030.2 (Peptide methionine sulfoxide reductase family protein ) HSP 1 Score: 242.7 bits (618), Expect = 3.3e-64 Identity = 121/171 (70.76%), Postives = 142/171 (83.04%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. TAIR 10
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1 ) HSP 1 Score: 109.0 bits (271), Expect = 5.7e-24 Identity = 64/168 (38.10%), Postives = 90/168 (53.57%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. TAIR 10
Match: AT4G25130.1 (peptide met sulfoxide reductase 4 ) HSP 1 Score: 107.8 bits (268), Expect = 1.3e-23 Identity = 62/145 (42.76%), Postives = 80/145 (55.17%), Query Frame = 0
BLAST of CsaV3_6G046980 vs. TAIR 10
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2 ) HSP 1 Score: 103.2 bits (256), Expect = 3.1e-22 Identity = 61/145 (42.07%), Postives = 80/145 (55.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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