CsGy6G035195 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G035195
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	cyclic phosphodiesterase-like
Location	Gy14Chr6: 31103657 .. 31105146 (+)
RNA-Seq Expression	CsGy6G035195
Synteny	CsGy6G035195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAACCCAGAATCGGCATCTATCCAATCCGATGAAGAGGAAACGCACGTGTATTCTGTGTGGGCTCTTCCTCCCGAAGATGTCTCCGCCAGAATCGAGAACCTCATGAAAAGCCTCAGATCCGAGTTTGGCGGGCCCCTATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCACCGCTGAAGACGCCCTTACCAAATTCCGCACGGCTTGTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTAACCACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACCGAGGTGCTGCCCTCTCATCTTTCTGCTCTTCCTTTCCGTCTTTTACGGTTCTTTGTTTTTCCTCTTTTTGTTTGTTTGATTCTTCTCTCGCCTCCTCTTTTTTTTTTTTTTTTTTTTCCTTTTCAGGTGGTGGAGACAAGTTCACATTTTTGTAAACATTTTGATTTCAAAAGCTCTACCCGTAAGTTCTTATTCTCCTGCTGAATTTTTAGTTTCCCAAAAAAAATGCTATATTCACATTCAATGCAGTATCTTCTTAAGGATATAAATTTTGACTTTGAAGTAGCAGTTTTGTTTGTTGATTTGCTAATTCAATCATGAATTACATTCAGAATGATGAATTGGTTCTACTATCTCTCTATAAAATCAAATTGATATATGCTTCAACCAGGGTGAGAGTTTCTGCGGGCCAGCTTATGTAATTTTAGACTAAGATTACCTGATGATCATATTTGGATTTTACATATTTTGTGTTAAAGATCCCTCAATACTTGGTTAATTAATGGGTCAAGGAAGATTCGTTAAACTTGTTGTGATTATTCATCTTGATGGTGATAGTAATGGCAATTATCTGCAAAATGATATACTCATATACGTGAGCAGACTAAGAAGTTGAGCTAAATTTCTTCTTTAAGATCAAATGATAATTTAATTGGATTAGTTATATGAAGGTAAATAAATGCAAGCGTGTTTTCTATTCAATTGGTGAAGTTTAGCATCTTTTGCCCTTCTTTGTTTCGAATTTCTTTACTTAGAGATGAACAGAGAATCCCTTGTATGAGATATAGGCTGCTACTCCTGTATTGCAACTTTCTTTAAATTGGTGAGGTTTGAGTTTTAAAATAGATCAAGTTCTCTGAAAGGTTCGGCTGGAGTAGAATAGAACAAAAAGTATGCTTGTTTAGCAACAAGGTAATGAGGATGCTTCTCGAATCTCAACTAATAACATGAATGACATTTCTGTATCAGCTTACATGCCGCATATGAGCCTACTGTATTCCCACATATCAGATGAAAAAAGGAAGCAGGCAAAAGAAATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTGAGATTCCCCATTACTCGACTTGCACTGTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCCTGGGATAAAATTGTAGAACACGATCTTTCTTCAAGTTAG

mRNA sequence

ATGATGAACCCAGAATCGGCATCTATCCAATCCGATGAAGAGGAAACGCACGTGTATTCTGTGTGGGCTCTTCCTCCCGAAGATGTCTCCGCCAGAATCGAGAACCTCATGAAAAGCCTCAGATCCGAGTTTGGCGGGCCCCTATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCACCGCTGAAGACGCCCTTACCAAATTCCGCACGGCTTGTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTAACCACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACCGAGGTGGTGGAGACAAGTTCACATTTTTGTAAACATTTTGATTTCAAAAGCTCTACCCCTTACATGCCGCATATGAGCCTACTGTATTCCCACATATCAGATGAAAAAAGGAAGCAGGCAAAAGAAATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTGAGATTCCCCATTACTCGACTTGCACTGTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCCTGGGATAAAATTGTAGAACACGATCTTTCTTCAAGTTAG

Coding sequence (CDS)

ATGATGAACCCAGAATCGGCATCTATCCAATCCGATGAAGAGGAAACGCACGTGTATTCTGTGTGGGCTCTTCCTCCCGAAGATGTCTCCGCCAGAATCGAGAACCTCATGAAAAGCCTCAGATCCGAGTTTGGCGGGCCCCTATTCGAGCCACATATCACCGTTGTTGGAGCAATCCGTCTCACCGCTGAAGACGCCCTTACCAAATTCCGCACGGCTTGTCAGGGGATTAAGGCTTATCAAGCCACCGTCGATCATGTAACCACCGGAACCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACCGAGGTGGTGGAGACAAGTTCACATTTTTGTAAACATTTTGATTTCAAAAGCTCTACCCCTTACATGCCGCATATGAGCCTACTGTATTCCCACATATCAGATGAAAAAAGGAAGCAGGCAAAAGAAATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTGAGATTCCCCATTACTCGACTTGCACTGTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCCTGGGATAAAATTGTAGAACACGATCTTTCTTCAAGTTAG

Protein sequence

MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDFKSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLSSS*

Homology

[Close]

BLAST of CsGy6G035195 vs. ExPASy Swiss-Prot
Match: O04147 (Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.6e-50
Identity = 93/179 (51.96%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 12  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFR 71
           +E +  VYSVWALP E+   R + LM++LRSEF GP F PH+TV  +  LTA++A   F 
Sbjct: 2   EEVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFE 61

Query: 72  TACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDFKSSTPYMPHMS 131
           +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+E   H   HF+  ++TPYMPH+S
Sbjct: 62  SACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLS 121

Query: 132 LLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLS 191
           LLY+ +++E++K A+E A  LD +++GL F + RLALCKTDT D+TL++W+ +   +L+
Sbjct: 122 LLYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVAVCNLN 180

[Close]

BLAST of CsGy6G035195 vs. NCBI nr
Match: XP_004134643.1 (cyclic phosphodiesterase [Cucumis sativus] >KGN49342.1 hypothetical protein Csa_004021 [Cucumis sativus])

HSP 1 Score: 390 bits (1001), Expect = 9.56e-137
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR
Sbjct: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF
Sbjct: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS
Sbjct: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180

Query: 181 WDKIVEHDLSSS 192
           WDKIVEHDLSSS
Sbjct: 181 WDKIVEHDLSSS 192

[Close]

BLAST of CsGy6G035195 vs. NCBI nr
Match: XP_008439703.1 (PREDICTED: cyclic phosphodiesterase-like [Cucumis melo])

HSP 1 Score: 358 bits (920), Expect = 2.15e-124
Identity = 176/192 (91.67%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLLIHPTTEVVETSSHFCKHF F
Sbjct: 61  LTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSSHFCKHFGF 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           K+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKS
Sbjct: 121 KNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKS 180

Query: 181 WDKIVEHDLSSS 192
           W+KIVEHDLSSS
Sbjct: 181 WEKIVEHDLSSS 192

[Close]

BLAST of CsGy6G035195 vs. NCBI nr
Match: XP_038882567.1 (cyclic phosphodiesterase-like [Benincasa hispida])

HSP 1 Score: 325 bits (833), Expect = 3.91e-111
Identity = 159/192 (82.81%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M NPESASIQ  E E +VYSVWALPPEDV+ARI+NLM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MANPESASIQPSEAENNVYSVWALPPEDVTARIKNLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LT +DAL KFR+ACQG+KAYQATVDHV+TGTFFYQCVFLLIH TTEVVETSSH C HF +
Sbjct: 61  LTPDDALNKFRSACQGLKAYQATVDHVSTGTFFYQCVFLLIHSTTEVVETSSHCCGHFGY 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           K+STPYMPHMSLLY++ISDEK+KQAK IADKLDEAVNGL+FPITRLAL KTDT DETLKS
Sbjct: 121 KNSTPYMPHMSLLYANISDEKKKQAKVIADKLDEAVNGLKFPITRLALYKTDTEDETLKS 180

Query: 181 WDKIVEHDLSSS 192
           W+KI EH+L SS
Sbjct: 181 WEKIAEHELPSS 192

[Close]

BLAST of CsGy6G035195 vs. NCBI nr
Match: KAA0052590.1 (cyclic phosphodiesterase-like [Cucumis melo var. makuwa] >TYK13235.1 cyclic phosphodiesterase-like [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (807), Expect = 3.12e-107
Identity = 164/197 (83.25%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLLIHPTTEV+   SH       
Sbjct: 61  LTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVLP--SH------- 120

Query: 121 KSSTP-----YMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTAD 180
            S+ P     YMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+D
Sbjct: 121 PSALPLRLLAYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSD 180

Query: 181 ETLKSWDKIVEHDLSSS 192
           ETLKSW+KIVEHDLSSS
Sbjct: 181 ETLKSWEKIVEHDLSSS 188

[Close]

BLAST of CsGy6G035195 vs. NCBI nr
Match: XP_023543945.1 (cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (793), Expect = 4.87e-105
Identity = 150/192 (78.12%), Postives = 169/192 (88.02%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M NPES  IQ  E E +VYSVWALPPEDV+ARI  LM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLLIHPTT+VVETSSH C HF +
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           K+STPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL FPITRLAL KTDT DETLKS
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WDKIVEHDLSSS 192
           W+KI E DL SS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of CsGy6G035195 vs. ExPASy TrEMBL
Match: A0A0A0KLS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520400 PE=4 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 4.63e-137
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR
Sbjct: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF
Sbjct: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS
Sbjct: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180

Query: 181 WDKIVEHDLSSS 192
           WDKIVEHDLSSS
Sbjct: 181 WDKIVEHDLSSS 192

[Close]

BLAST of CsGy6G035195 vs. ExPASy TrEMBL
Match: A0A1S3AYZ1 (cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 1.04e-124
Identity = 176/192 (91.67%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLLIHPTTEVVETSSHFCKHF F
Sbjct: 61  LTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSSHFCKHFGF 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           K+STPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKS
Sbjct: 121 KNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKS 180

Query: 181 WDKIVEHDLSSS 192
           W+KIVEHDLSSS
Sbjct: 181 WEKIVEHDLSSS 192

[Close]

BLAST of CsGy6G035195 vs. ExPASy TrEMBL
Match: A0A5D3CNS3 (Cyclic phosphodiesterase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008500 PE=4 SV=1)

HSP 1 Score: 315 bits (807), Expect = 1.51e-107
Identity = 164/197 (83.25%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M+NPESASIQS EEET+VYSVWALPPEDVSARIENLM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LTAEDAL KF TACQGIKAYQATVDHV+TGTFFYQCVFLLIHPTTEV+   SH       
Sbjct: 61  LTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVLP--SH------- 120

Query: 121 KSSTP-----YMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTAD 180
            S+ P     YMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGL+FPITRLAL KTDT+D
Sbjct: 121 PSALPLRLLAYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSD 180

Query: 181 ETLKSWDKIVEHDLSSS 192
           ETLKSW+KIVEHDLSSS
Sbjct: 181 ETLKSWEKIVEHDLSSS 188

[Close]

BLAST of CsGy6G035195 vs. ExPASy TrEMBL
Match: A0A6J1INY2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 2.36e-105
Identity = 149/192 (77.60%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M NPES +IQ  E E +VYSVWALPPEDV+ARI  LM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MANPESPTIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLLIHPTT+VVETSSH C HF +
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           K+STPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL FP+TRLAL KTDT DETLKS
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDETLKS 180

Query: 181 WDKIVEHDLSSS 192
           W+KI E DL SS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of CsGy6G035195 vs. ExPASy TrEMBL
Match: A0A6J1EGC1 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4 SV=1)

HSP 1 Score: 303 bits (775), Expect = 1.26e-102
Identity = 149/192 (77.60%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 1   MMNPESASIQSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIR 60
           M NPES  IQ  E E +VYSVWALPPEDV ARI  LM SLRSEFGGP FEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVMARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTAEDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDF 120
           LT +DAL KFR+AC+G+KAYQATVD V+TGTFFYQCVFLLIHPTT+VVETSSH C HF +
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 KSSTPYMPHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKS 180
           K+ TPYMPH+SLLY++ISDE++KQAKE+A+KLDEA+NGL FPITRLAL KTDT DETLKS
Sbjct: 121 KN-TPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WDKIVEHDLSSS 192
           W+KI E DL SS
Sbjct: 181 WEKIAEQDLPSS 191

[Close]

BLAST of CsGy6G035195 vs. TAIR 10
Match: AT4G18930.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-51
Identity = 93/179 (51.96%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 12  DEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTAEDALTKFR 71
           +E +  VYSVWALP E+   R + LM++LRSEF GP F PH+TV  +  LTA++A   F 
Sbjct: 2   EEVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFE 61

Query: 72  TACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDFKSSTPYMPHMS 131
           +AC G+KAY ATVD V+TGTFF+QCVFLL+  T EV+E   H   HF+  ++TPYMPH+S
Sbjct: 62  SACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLS 121

Query: 132 LLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEHDLS 191
           LLY+ +++E++K A+E A  LD +++GL F + RLALCKTDT D+TL++W+ +   +L+
Sbjct: 122 LLYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVAVCNLN 180

[Close]

BLAST of CsGy6G035195 vs. TAIR 10
Match: AT4G18940.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 82/184 (44.57%), Postives = 123/184 (66.85%), Query Frame = 0


Query: 10  QSDEEETHVYSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAI--RLTAEDAL 69
           + DEEE  +Y++WA+P +DV  R++ LM+ LRSEFGGP F+PH+T+VG    +LTA +A 
Sbjct: 16  EDDEEEKAMYAIWAVPEDDVEDRLQRLMEGLRSEFGGPAFDPHLTLVGPFPYKLTASEAK 75

Query: 70  TKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTEVVETSSHFCKHFDFKSSTPYM 129
             F++AC+G K Y ATVD V+ GT ++QC+++ +  T EV+  + HF  HF   +   Y+
Sbjct: 76  RMFKSACEGFKVYPATVDQVSAGTSYFQCLYVSLRHTVEVMNAAGHFMAHFKPFTGKFYV 135

Query: 130 PHMSLLYSHISDEKRKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWDKIVEH 189
           PHMS+LY  +++ ++K+A E A  LD +++GL F I R+AL  TD     + SW K+ EH
Sbjct: 136 PHMSILYGDLTEREKKKALEKAYTLDSSLDGLNFKINRVALWITDA---DVGSWVKVDEH 195

Query: 190 DLSS 192
            L S
Sbjct: 196 TLIS 196

The following BLAST results are available for this feature:

BLAST of CsGy6G035195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04147	2.6e-50	51.96	Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1	[more]

BLAST of CsGy6G035195 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134643.1	9.56e-137	100.00	cyclic phosphodiesterase [Cucumis sativus] >KGN49342.1 hypothetical protein Csa_...	[more]
XP_008439703.1	2.15e-124	91.67	PREDICTED: cyclic phosphodiesterase-like [Cucumis melo]	[more]
XP_038882567.1	3.91e-111	82.81	cyclic phosphodiesterase-like [Benincasa hispida]	[more]
KAA0052590.1	3.12e-107	83.25	cyclic phosphodiesterase-like [Cucumis melo var. makuwa] >TYK13235.1 cyclic phos...	[more]
XP_023543945.1	4.87e-105	78.13	cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G035195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLS9	4.63e-137	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520400 PE=4 SV=1	[more]
A0A1S3AYZ1	1.04e-124	91.67	cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1	[more]
A0A5D3CNS3	1.51e-107	83.25	Cyclic phosphodiesterase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1INY2	2.36e-105	77.60	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 S...	[more]
A0A6J1EGC1	1.26e-102	77.60	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4...	[more]

BLAST of CsGy6G035195 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18930.1	1.9e-51	51.96	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT4G18940.1	2.1e-42	44.57	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PFAM	PF07823	CPDase	coord: 20..157 e-value: 8.5E-12 score: 45.2
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PIRSF	PIRSF017903	CPDase_plant	coord: 2..191 e-value: 1.1E-68 score: 228.7
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PANTHER	PTHR28141	2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE	coord: 14..189
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 11..192 e-value: 1.7E-53 score: 182.9
None	No IPR available	PANTHER	PTHR28141:SF4	CYCLIC PHOSPHODIESTERASE-LIKE	coord: 14..189
IPR009097	Cyclic phosphodiesterase	SUPERFAMILY	55144	LigT-like	coord: 13..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G035195.1	CsGy6G035195.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009187	cyclic nucleotide metabolic process
molecular_function	GO:0004113	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
molecular_function	GO:0004112	cyclic-nucleotide phosphodiesterase activity