CsGy6G021492 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G021492
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 22107910 .. 22108277 (-)
RNA-Seq ExpressionCsGy6G021492
SyntenyCsGy6G021492
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTTCTTCCTCAAAACGTGTTTCTTCTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTCCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGTATTGGGTGTTTGAGTCTACTCTTTGATAGTCTGATTGTGGTATTGATTTCTTGTTTTGAGCTTTTTTTGGTTTCATGGGTTGCTGTAATTTTTGAAGTTGAAAGTGGGTTTTTATTGCAGGCAGGAGGAAAGGAGGAGGAATAATTTGAATTTTGGAATTCAGAAGCTTGACAAGAGTTGTTCAGGAAAGTACCAAATCGATTGA

mRNA sequence

ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTTCTTCCTCAAAACGTGTTTCTTCTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTCCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGCAGGAGGAAAGGAGGAGGAATAATTTGAATTTTGGAATTCAGAAGCTTGACAAGAGTTGTTCAGGAAAGTACCAAATCGATTGA

Coding sequence (CDS)

ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTTCTTCCTCAAAACGTGTTTCTTCTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTCCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGCAGGAGGAAAGGAGGAGGAATAATTTGAATTTTGGAATTCAGAAGCTTGACAAGAGTTGTTCAGGAAAGTACCAAATCGATTGA

Protein sequence

MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRRNNLNFGIQKLDKSCSGKYQID*
Homology
[Close]
BLAST of CsGy6G021492 vs. NCBI nr
Match: KGN47920.1 (hypothetical protein Csa_004333 [Cucumis sativus])

HSP 1 Score: 159 bits (402), Expect = 5.68e-49
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60
          MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR
Sbjct: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60

Query: 61 NNLNFGIQKLDKSCSGKYQID 81
          NNLNFGIQKLDKSCSGKYQID
Sbjct: 61 NNLNFGIQKLDKSCSGKYQID 81

[Close]
BLAST of CsGy6G021492 vs. ExPASy TrEMBL
Match: A0A0A0KDY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 2.75e-49
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60
          MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR
Sbjct: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60

Query: 61 NNLNFGIQKLDKSCSGKYQID 81
          NNLNFGIQKLDKSCSGKYQID
Sbjct: 61 NNLNFGIQKLDKSCSGKYQID 81

The following BLAST results are available for this feature:
BLAST of CsGy6G021492 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G021492 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47920.15.68e-49100.00hypothetical protein Csa_004333 [Cucumis sativus][more]
BLAST of CsGy6G021492 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDY72.75e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1[more]
BLAST of CsGy6G021492 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G021492.1CsGy6G021492.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane