Cp4.1LG10g08980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g08980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	TIR domain-containing protein
Location	Cp4.1LG10: 4730564 .. 4731224 (-)
RNA-Seq Expression	Cp4.1LG10g08980
Synteny	Cp4.1LG10g08980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACGGTCACCGGCGGCGGTGAAGGGCACGCGCCTGTGCGCCAAAATTAAAAACAGAATTAAAAACAGAATCAAAACGGAATCCCCAGATTTCGACGTGTTCATAAGCCACCGTGGAATCGACACAAGACGGAGCGTGGCCGGAATATTGCACGAGCATTTCTCCGGCTTGGGGCTGCGGCCATTTCTCGACGTCAAGTCCATGTCCCCCGGCGACAATCTCATTGCCAAAATTGACCCCGCCATCCGAAGCTGTAGGGTCGGAGTACCGGTTTTTTCGCCTCGGTATTGCGACTCGTATTACTGTCTCTATGAGCTGGCTCGTATGCTGCGATCCAATAAATGGATCGTGCCGATTTTTTGGAATGTGAAGCCGTCAGAGCTCCGAGTTGCCGATGAAAATAAAAGGCTCAGCCGCTTCGCTTGGGCCGTTGAGGAAGCTAAGTGTACTGTCGGCTTGTCTTTCGACTCCACAAATGGGTACAATTTAAATTTATCCTAGATATATATATTATTATTATTCTAATGTAATTTTATTATTATTATTTATTATTATTATTATTATTATTATTATTATTTTGGTGTGCAGTGATTGGTCGGAGCTGCTCACCAGTGTTTCAGGTGCAGTGATGAAGTTGGTCGAGGAAGATGAAAGATAA

mRNA sequence

ATGCAACGGTCACCGGCGGCGGTGAAGGGCACGCGCCTGTGCGCCAAAATTAAAAACAGAATTAAAAACAGAATCAAAACGGAATCCCCAGATTTCGACGTGTTCATAAGCCACCGTGGAATCGACACAAGACGGAGCGTGGCCGGAATATTGCACGAGCATTTCTCCGGCTTGGGGCTGCGGCCATTTCTCGACGTCAAGTCCATGTCCCCCGGCGACAATCTCATTGCCAAAATTGACCCCGCCATCCGAAGCTGTAGGGTCGGAGTACCGGTTTTTTCGCCTCGGTATTGCGACTCGTATTACTGTCTCTATGAGCTGGCTCGTATGCTGCGATCCAATAAATGGATCGTGCCGATTTTTTGGAATGTGAAGCCGTCAGAGCTCCGAGTTGCCGATGAAAATAAAAGGCTCAGCCGCTTCGCTTGGGCCGTTGAGGAAGCTAAGTGTACTGTCGGCTTGTCTTTCGACTCCACAAATGGTGATTGGTCGGAGCTGCTCACCAGTGTTTCAGGTGCAGTGATGAAGTTGGTCGAGGAAGATGAAAGATAA

Coding sequence (CDS)

ATGCAACGGTCACCGGCGGCGGTGAAGGGCACGCGCCTGTGCGCCAAAATTAAAAACAGAATTAAAAACAGAATCAAAACGGAATCCCCAGATTTCGACGTGTTCATAAGCCACCGTGGAATCGACACAAGACGGAGCGTGGCCGGAATATTGCACGAGCATTTCTCCGGCTTGGGGCTGCGGCCATTTCTCGACGTCAAGTCCATGTCCCCCGGCGACAATCTCATTGCCAAAATTGACCCCGCCATCCGAAGCTGTAGGGTCGGAGTACCGGTTTTTTCGCCTCGGTATTGCGACTCGTATTACTGTCTCTATGAGCTGGCTCGTATGCTGCGATCCAATAAATGGATCGTGCCGATTTTTTGGAATGTGAAGCCGTCAGAGCTCCGAGTTGCCGATGAAAATAAAAGGCTCAGCCGCTTCGCTTGGGCCGTTGAGGAAGCTAAGTGTACTGTCGGCTTGTCTTTCGACTCCACAAATGGTGATTGGTCGGAGCTGCTCACCAGTGTTTCAGGTGCAGTGATGAAGTTGGTCGAGGAAGATGAAAGATAA

Protein sequence

MQRSPAAVKGTRLCAKIKNRIKNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELARMLRSNKWIVPIFWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGAVMKLVEEDER

Homology

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy Swiss-Prot
Match: I1GTC2 (TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.0e-37
Identity = 78/159 (49.06%), Postives = 110/159 (69.18%), Query Frame = 0


Query: 32  FDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVP 91
           ++VFI+HRG+DT+R+VA +L++  +  GLR FLD  SM PGD L  +I  AIR C V V 
Sbjct: 53  YEVFINHRGVDTKRTVARLLYDRLAQAGLRGFLDNMSMRPGDRLEERIGSAIRECTVAVA 112

Query: 92  VFSPRYCDSYYCLYELARMLRSNKWIVPIFWNVKPSEL----RVADEN----KRLSRFAW 151
           +FSP YCDS YCL ELA ++ S K I+PIF+++KPS+L     VAD      + L RF +
Sbjct: 113 IFSPSYCDSEYCLRELAMLVESRKAIIPIFYDIKPSDLLLPQAVADSEVYLPRDLERFKF 172

Query: 152 AVEEAKCTVGLSFDSTNGDWSELLTSVSGAVMKLVEEDE 183
           A+ EAK TVG+++DS  GD +EL+++ + AVM  +E+ E
Sbjct: 173 ALREAKHTVGITYDSATGDMAELVSAAADAVMYNMEKME 211

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-12
Identity = 50/156 (32.05%), Postives = 76/156 (48.72%), Query Frame = 0


Query: 29  SPDFDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRV 88
           S +FDVF+S RG DTR +  G L +     G+  F+D + +  GDNL A  D  I   ++
Sbjct: 8   SAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDR-LRRGDNLTALFD-RIEKSKI 67

Query: 89  GVPVFSPRYCDSYYCLYELARMLR----SNKWIVPIFWNVKPSELRVADENKRLSRFAWA 148
            + VFS  Y +S +CL EL ++L     + + +VPIF+ V  S     D  K+ + FA  
Sbjct: 68  AIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKS-----DVEKQRNSFAVP 127

Query: 149 VEEAKCTVGLSFDSTNGDWSELLTSVSGAVMKLVEE 181
            +  + T           W   L S S  +  +V+E
Sbjct: 128 FKLPELTFPGVTPEEISSWKAALASASNILGYVVKE 156

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-12
Identity = 41/120 (34.17%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 32  FDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVP 91
           +DVF+S RG DTR++    L+E  +  G++ F D K +  G  +  ++  AI   +  + 
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71

Query: 92  VFSPRYCDSYYCLYELARML----RSNKWIVPIFWNVKPSELRVADENKRLSRFAWAVEE 148
           VFS  Y  S +CL EL +++    R  + ++PIF++V PS +R   E+     FA A EE
Sbjct: 72  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKES-----FAKAFEE 126

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12
Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 32  FDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVP 91
           +DVF+S RG DTR++  G L       G+  F+D K +  G ++ +++  AI   R  V 
Sbjct: 12  YDVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELMKAIGESRFAVV 71

Query: 92  VFSPRYCDSYYCLYELARMLRSNK----WIVPIFWNVKPSELR 131
           VFS  Y  S +CL EL ++L  ++     +VP+F++V PS +R
Sbjct: 72  VFSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPSTVR 114

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy Swiss-Prot
Match: Q40253 (Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.3e-10
Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 29  SPDFDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRV 88
           S +++VF+S RG DTR      L++      +  F D   +  G  +   +  AI   ++
Sbjct: 58  SVEYEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKI 117

Query: 89  GVPVFSPRYCDSYYCLYELARMLR-----SNKWIVPIFWNVKPSELR 131
            VP+ S  Y DS +CL ELA ++R       + I+PIF+ V PS++R
Sbjct: 118 YVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVR 164

[Close]

BLAST of Cp4.1LG10g08980 vs. NCBI nr
Match: KAG7033887.1 (TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362 bits (928), Expect = 6.26e-126
Identity = 177/183 (96.72%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKNRIKNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL 60
           MQRSPAAVK T LCAKIKNRIKNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL
Sbjct: 1   MQRSPAAVKATHLCAKIKNRIKNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL 60

Query: 61  RPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELARMLRSNKWIVPI 120
           RPFLDVKSMSPGDNLI KID AIRSCRVGVPVFSPRYC+SYYCLYELARMLRSNKWIVPI
Sbjct: 61  RPFLDVKSMSPGDNLIGKIDSAIRSCRVGVPVFSPRYCESYYCLYELARMLRSNKWIVPI 120

Query: 121 FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGAVMKLVEE 180
           FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGA MKLVEE
Sbjct: 121 FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGAAMKLVEE 180

Query: 181 DER 183
           DER
Sbjct: 181 DER 183

[Close]

BLAST of Cp4.1LG10g08980 vs. NCBI nr
Match: XP_022950368.1 (toll/interleukin-1 receptor-like protein [Cucurbita moschata])

HSP 1 Score: 345 bits (885), Expect = 1.96e-119
Identity = 172/183 (93.99%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKNRIKNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL 60
           MQRSPAAVK T LCAKIKNRIK    TESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL
Sbjct: 1   MQRSPAAVKATHLCAKIKNRIK----TESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL 60

Query: 61  RPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELARMLRSNKWIVPI 120
            PFLDVKSMSPGDNLI KID AIRSCRVGVPVFSPRYC+SYYCLYELARMLRSNKWIVPI
Sbjct: 61  WPFLDVKSMSPGDNLIGKIDSAIRSCRVGVPVFSPRYCESYYCLYELARMLRSNKWIVPI 120

Query: 121 FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGAVMKLVEE 180
           FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL+SVSGAVMKLVEE
Sbjct: 121 FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLSSVSGAVMKLVEE 179

Query: 181 DER 183
           DER
Sbjct: 181 DER 179

[Close]

BLAST of Cp4.1LG10g08980 vs. NCBI nr
Match: XP_023003829.1 (TMV resistance protein N-like [Cucurbita maxima])

HSP 1 Score: 214 bits (546), Expect = 1.46e-67
Identity = 115/195 (58.97%), Postives = 148/195 (75.90%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKN--------RIKNR--IKTES-PDFDVFISHRGIDTRRSVAG 60
           MQRS  A K    CAK+ +        ++  R  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 3   MQRSILA-KAKHACAKLSSVYNKGSMIKLSERQVISTKNQPPFDVFISYRGTDTRRTIAG 62

Query: 61  ILHEHFSGLG-LRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELA 120
           +L++H S +G LRPFLD KS+SPGDN++ KI  A+++CRVG+PVFSPRYC+SYYCLYELA
Sbjct: 63  LLYDHLSHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122

Query: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 180
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182

Query: 181 TSVSGAVMKLVEEDE 182
           T+ S AV K++E  E
Sbjct: 183 TNASDAVRKMLEGSE 196

[Close]

BLAST of Cp4.1LG10g08980 vs. NCBI nr
Match: XP_022926604.1 (TMV resistance protein N-like [Cucurbita moschata] >KAG6594617.1 TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026587.1 TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213 bits (542), Expect = 5.91e-67
Identity = 115/195 (58.97%), Postives = 145/195 (74.36%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAK----------IKNRIKNRIKTES-PDFDVFISHRGIDTRRSVAG 60
           MQRS  A K    CAK          IK   +  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 3   MQRSILA-KAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAG 62

Query: 61  ILHEHFSGLG-LRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELA 120
           +L++H   +G LRPFLD KS+SPGDN++ KI  A+++CRVG+PVFSPRYC+SYYCLYELA
Sbjct: 63  LLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122

Query: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 180
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182

Query: 181 TSVSGAVMKLVEEDE 182
           T+ S AV K++E  E
Sbjct: 183 TNASDAVRKMLEASE 196

[Close]

BLAST of Cp4.1LG10g08980 vs. NCBI nr
Match: XP_023517713.1 (TMV resistance protein N-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211 bits (536), Expect = 4.82e-66
Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKN--------RIKNR--IKTES-PDFDVFISHRGIDTRRSVAG 60
           MQRS  A K    CAK+ +        ++  R  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 3   MQRSILA-KAKHACAKLSSVYNKGSIIKLSERQVISTKNQPPFDVFISYRGTDTRRTIAG 62

Query: 61  ILHEHFSGLG-LRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELA 120
           +L++H   +G L PFLD KS+SPGDN++ KI  A+++CRVG+PVFSPRYC+SYYCLYELA
Sbjct: 63  LLYDHLYHVGQLHPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122

Query: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 180
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182

Query: 181 TSVSGAVMKLVEEDE 182
           T+ S AV K++E  E
Sbjct: 183 TNASDAVRKMLEASE 196

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy TrEMBL
Match: A0A6J1GEQ2 (toll/interleukin-1 receptor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453481 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 9.49e-120
Identity = 172/183 (93.99%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKNRIKNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL 60
           MQRSPAAVK T LCAKIKNRIK    TESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL
Sbjct: 1   MQRSPAAVKATHLCAKIKNRIK----TESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL 60

Query: 61  RPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELARMLRSNKWIVPI 120
            PFLDVKSMSPGDNLI KID AIRSCRVGVPVFSPRYC+SYYCLYELARMLRSNKWIVPI
Sbjct: 61  WPFLDVKSMSPGDNLIGKIDSAIRSCRVGVPVFSPRYCESYYCLYELARMLRSNKWIVPI 120

Query: 121 FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGAVMKLVEE 180
           FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL+SVSGAVMKLVEE
Sbjct: 121 FWNVKPSELRVADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLSSVSGAVMKLVEE 179

Query: 181 DER 183
           DER
Sbjct: 181 DER 179

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy TrEMBL
Match: A0A6J1KUG3 (TMV resistance protein N-like OS=Cucurbita maxima OX=3661 GN=LOC111497297 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 7.06e-68
Identity = 115/195 (58.97%), Postives = 148/195 (75.90%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKN--------RIKNR--IKTES-PDFDVFISHRGIDTRRSVAG 60
           MQRS  A K    CAK+ +        ++  R  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 3   MQRSILA-KAKHACAKLSSVYNKGSMIKLSERQVISTKNQPPFDVFISYRGTDTRRTIAG 62

Query: 61  ILHEHFSGLG-LRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELA 120
           +L++H S +G LRPFLD KS+SPGDN++ KI  A+++CRVG+PVFSPRYC+SYYCLYELA
Sbjct: 63  LLYDHLSHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122

Query: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 180
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182

Query: 181 TSVSGAVMKLVEEDE 182
           T+ S AV K++E  E
Sbjct: 183 TNASDAVRKMLEGSE 196

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy TrEMBL
Match: A0A6J1EFM8 (TMV resistance protein N-like OS=Cucurbita moschata OX=3662 GN=LOC111433685 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 2.86e-67
Identity = 115/195 (58.97%), Postives = 145/195 (74.36%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAK----------IKNRIKNRIKTES-PDFDVFISHRGIDTRRSVAG 60
           MQRS  A K    CAK          IK   +  I T++ P FDVFIS+RG DTRR++AG
Sbjct: 3   MQRSILA-KAKHACAKLSGVYNKGSIIKLNERQVISTKNQPPFDVFISYRGTDTRRTIAG 62

Query: 61  ILHEHFSGLG-LRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELA 120
           +L++H   +G LRPFLD KS+SPGDN++ KI  A+++CRVG+PVFSPRYC+SYYCLYELA
Sbjct: 63  LLYDHLYHVGQLRPFLDYKSLSPGDNIMDKISAAVKTCRVGLPVFSPRYCESYYCLYELA 122

Query: 121 RMLRSNKWIVPIFWNVKPSELRV-ADENKRLSRFAWAVEEAKCTVGLSFDSTNGDWSELL 180
            M R++K IVPIF ++KPS+LRV +D +  L  FAWA++EAK TVGLSFDSTNGDWSELL
Sbjct: 123 LMYRTSKCIVPIFCDMKPSQLRVPSDRSSTLQCFAWALDEAKETVGLSFDSTNGDWSELL 182

Query: 181 TSVSGAVMKLVEEDE 182
           T+ S AV K++E  E
Sbjct: 183 TNASDAVRKMLEASE 196

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy TrEMBL
Match: A0A7N2R4T8 (TIR domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 202 bits (515), Expect = 2.79e-63
Identity = 104/187 (55.61%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKNRI-KNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLG 60
           MQRSPA +K   + +KI + + K++ +T S   DVFI+HRGIDT+R+VAG+L+ H SG+G
Sbjct: 1   MQRSPALIKSF-ISSKILHSLPKSQTRTLSRSCDVFINHRGIDTKRTVAGLLYNHLSGMG 60

Query: 61  LRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELARMLRSNKWIVP 120
           L+PFLD ++M PGD L  KID AI + ++GV VFSPRYC+SY+CL+ELA ++ S K ++P
Sbjct: 61  LKPFLDSQNMKPGDKLFDKIDKAILNSKLGVAVFSPRYCESYFCLHELALIMESKKRVIP 120

Query: 121 IFWNVKPSELRVADEN----KRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGAVM 180
           IF +VKPS+LRV D      K L RF WA+EEAK TVGL+FD++ GDWSE L + S AVM
Sbjct: 121 IFCDVKPSQLRVKDYGICPAKELQRFTWALEEAKYTVGLTFDTSRGDWSEFLRNASDAVM 180

Query: 181 KLVEEDE 182
           K + E E
Sbjct: 181 KNLLEVE 186

[Close]

BLAST of Cp4.1LG10g08980 vs. ExPASy TrEMBL
Match: A0A5J4ZPC6 (TIR domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014081 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 5.26e-63
Identity = 106/187 (56.68%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 1   MQRSPAAVKGTRLCAKIKNRIKNRIKTESPDFDVFISHRGIDTRRSVAGILHEHFSGLGL 60
           MQ S +A    R   + +N ++  IKT+ P  DVFI+HRGIDT+R+VAG+L+++ S L L
Sbjct: 1   MQYSSSAKNVCRQILRHQNHLQT-IKTQ-PSCDVFINHRGIDTKRNVAGLLYDYLSVLKL 60

Query: 61  RPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPVFSPRYCDSYYCLYELARMLRSNKWIVPI 120
           RPFLD KSM PGD L  KIDPAIR+C+VG+ VFSPRYC+SY+CL+EL+ ++ S K ++PI
Sbjct: 61  RPFLDSKSMKPGDKLFEKIDPAIRNCKVGIAVFSPRYCESYFCLHELSLIMESKKKVIPI 120

Query: 121 FWNVKPSELRVADEN----KRLSRFAWAVEEAKCTVGLSFDSTNGDWSELLTSVSGAVMK 180
           F +VKPSELRV+       K L RFAWA+EEAK TVGL+FDS+ GDWS+ L S   AV+K
Sbjct: 121 FCDVKPSELRVSPSERYLPKELRRFAWALEEAKYTVGLTFDSSKGDWSKFLLSAGDAVVK 180

Query: 181 -LVEEDE 182
            L+E +E
Sbjct: 181 NLLEVEE 185

[Close]

BLAST of Cp4.1LG10g08980 vs. TAIR 10
Match: AT1G61105.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.5e-45
Identity = 85/156 (54.49%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 33  DVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPV 92
           D+FI+HRGIDT+++++G+L++ F+   L  FLD KS+ PGD L  +ID AI++C VG+ V
Sbjct: 30  DIFINHRGIDTKKTISGLLYDCFTRQRLTAFLDSKSLKPGDRLFVEIDMAIKACGVGIAV 89

Query: 93  FSPRYCDSYYCLYELARMLRSNKWIVPIFWNVKPSELRVADENKR----LSRFAWAVEEA 152
           FSPRYCDSY+CL+ELA ++++ K ++PIF +VKPSEL V D+  R    + RF  A+EEA
Sbjct: 90  FSPRYCDSYFCLHELALLVKNKKRVIPIFCDVKPSELCVKDDKTRPAAEIRRFQLALEEA 149

Query: 153 KCTVGLSFDSTNGDWSELLTSVSGAVMK-LVEEDER 184
           K TVGL+FD++NGDWSE L   S AV K L+E +ER
Sbjct: 150 KYTVGLTFDTSNGDWSEFLAMASDAVTKNLLEVEER 185

[Close]

BLAST of Cp4.1LG10g08980 vs. TAIR 10
Match: AT1G52900.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 154.8 bits (390), Expect = 6.5e-38
Identity = 74/155 (47.74%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 33  DVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVPV 92
           DVFI+HRG DT+R++A +L+++     LRPFLD K+M PGD L   I+ AI + +V V V
Sbjct: 39  DVFINHRGSDTKRNIATLLYDNLKSRNLRPFLDSKNMKPGDKLFDHINNAILTSKVAVTV 98

Query: 93  FSPRYCDSYYCLYELARMLRSNKWIVPIFWNVKPSEL-----RVADENKRLSRFAWAVEE 152
           FSP YCDSY+CL+ELA ++ S K ++PIF ++KPS+L     RV   +  + RF WA++E
Sbjct: 99  FSPNYCDSYFCLHELALIMESRKRVIPIFCDIKPSQLDVMIERVTCSDDEIQRFRWALQE 158

Query: 153 AKCTVGLSFDSTNGDWSELLTSVSGAVMKLVEEDE 183
           AK  VGL+FDS  G+ SE++T  S  +++ + E E
Sbjct: 159 AKDIVGLTFDSYKGNLSEVVTVASDVIVERLVELE 193

[Close]

BLAST of Cp4.1LG10g08980 vs. TAIR 10
Match: AT4G09430.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-14
Identity = 39/108 (36.11%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 27  TESPDFDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSC 86
           T   ++DVF+S RG DTR ++   LH+    +G+R F D K +  GD +  K+  AI++ 
Sbjct: 10  TRVKEYDVFLSFRGADTRNNIVSYLHKALVDVGIRTFKDDKELEEGDIISEKLVNAIQTS 69

Query: 87  RVGVPVFSPRYCDSYYCLYELARM----LRSNKWIVPIFWNVKPSELR 131
              V V S +Y  S +CL EL  +    ++ +  +VPIF+ V+PS++R
Sbjct: 70  WFAVVVLSEKYVTSSWCLEELRHIMELSIQDDIIVVPIFYKVEPSDVR 117

[Close]

BLAST of Cp4.1LG10g08980 vs. TAIR 10
Match: AT1G17615.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 0


Query: 32  FDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVP 91
           FDVF+S RG DTRR+    L++    +G+R F D   +  G  + + +  AI + ++ V 
Sbjct: 15  FDVFLSFRGKDTRRTFISFLYKELIEMGIRTFKDDVELQSGRRIASDLLAAIENSKIAVV 74

Query: 92  VFSPRYCDSYYCLYELARMLRSNK----WIVPIFWNVKPSELRVADENKRLSRFAWAVEE 151
           + S  Y  S +CL EL  ++   K     ++PIF+NV+P+ +R   E           ++
Sbjct: 75  IISKNYSASPWCLQELVMIMDVEKKGSIIVMPIFYNVEPAHVRRQIEQ--------VAKQ 134

Query: 152 AKCTVGLSFDSTNGDWSELLT---SVSGAVMKLVEEDER 184
            +   G     T   W + LT   S+SG   +  E+D +
Sbjct: 135 FRKHEGRENYETVVSWRQALTNLASISGHCSRDCEDDSK 165

[Close]

BLAST of Cp4.1LG10g08980 vs. TAIR 10
Match: AT1G72860.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 32  FDVFISHRGIDTRRSVAGILHEHFSGLGLRPFLDVKSMSPGDNLIAKIDPAIRSCRVGVP 91
           +DVF+S RG DTR+++   LH+     G+  F D K +  GD++  +I  AI++    + 
Sbjct: 12  YDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALV 71

Query: 92  VFSPRYCDSYYCLYELARM----LRSNKWIVPIFWNVKPSELRVADENKRLSRFAWAVEE 151
           + S  Y  S +CL EL  +    L++   +VPIF+ V PS +R    +    ++  +   
Sbjct: 72  ILSENYASSSWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQTGSFTFDKYQDSKMP 131

Query: 152 AKCTVGLSFDSTNGDWSELLTSVSGAVMKLVE--EDE 183
            K T           W E LT ++    K  E  EDE
Sbjct: 132 NKVTT----------WREALTQIASLAGKDFETCEDE 158

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g08980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1GTC2	7.0e-37	49.06	TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=...	[more]
Q9SZ66	2.7e-12	32.05	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=...	[more]
Q40392	2.7e-12	34.17	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
A0A290U7C4	6.0e-12	35.92	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
Q40253	7.3e-10	32.71	Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1	[more]

BLAST of Cp4.1LG10g08980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033887.1	6.26e-126	96.72	TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950368.1	1.96e-119	93.99	toll/interleukin-1 receptor-like protein [Cucurbita moschata]	[more]
XP_023003829.1	1.46e-67	58.97	TMV resistance protein N-like [Cucurbita maxima]	[more]
XP_022926604.1	5.91e-67	58.97	TMV resistance protein N-like [Cucurbita moschata] >KAG6594617.1 TIR-only protei...	[more]
XP_023517713.1	4.82e-66	57.95	TMV resistance protein N-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG10g08980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEQ2	9.49e-120	93.99	toll/interleukin-1 receptor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KUG3	7.06e-68	58.97	TMV resistance protein N-like OS=Cucurbita maxima OX=3661 GN=LOC111497297 PE=4 S...	[more]
A0A6J1EFM8	2.86e-67	58.97	TMV resistance protein N-like OS=Cucurbita moschata OX=3662 GN=LOC111433685 PE=4...	[more]
A0A7N2R4T8	2.79e-63	55.61	TIR domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A5J4ZPC6	5.26e-63	56.68	TIR domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014081 PE=4 S...	[more]

BLAST of Cp4.1LG10g08980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61105.1	5.5e-45	54.49	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G52900.1	6.5e-38	47.74	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT4G09430.1	1.0e-14	36.11	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G17615.1	4.2e-13	28.93	Disease resistance protein (TIR-NBS class)	[more]
AT1G72860.1	4.2e-13	29.94	Disease resistance protein (TIR-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 31..173 e-value: 5.0E-18 score: 75.9
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF13676	TIR_2	coord: 34..126 e-value: 1.1E-14 score: 55.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 30..149 score: 23.524109
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 11..151 e-value: 8.3E-30 score: 105.4
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 26..130
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 19..180
None	No IPR available	PANTHER	PTHR31008:SF19	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN	coord: 19..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g08980.1	Cp4.1LG10g08980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity