Cp4.1LG10g01520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g01520
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH93
Location	Cp4.1LG10: 3080435 .. 3082217 (-)
RNA-Seq Expression	Cp4.1LG10g01520
Synteny	Cp4.1LG10g01520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGCAGTATACCATGATGATCACTTTTTTTTATTTTTTTTATTTTTATAGATTTAAAAATAAAATTAAAAAAACCCCTTCCTTTTTTATCTTTTTGTTTATTATAATATTTCCCCAACTTGGTGCAACTCCATGTTCATTACACTCTGTTCTCCACTTTCTTCAGGCCAAAAGAGGGAAGAACAACCAACAAAATGGAGCTCAGTCAACATGGTTTCTTAGAGGAGTTATTAGCTTCCACGCCTTGGTCCTCTTCTTATTCAAATGGCTTCAATGATTTCTTCCAAAATACCTGGAATTTCGGTTGTTTTGATGAAAATCCCCAAATGGGTACCTCTATTTCCCCCCATTTTCCCGCTCTCCAAACTGCTACTGATTTTTCCTTCGCCGACCAATACCTCTACACCAATTTTCTCGAAGGCTTTGCAATGCCGGAGCTCGATTCTTCATCGTACACTAGGAATAACGAAACCCCACCATTCGTTTCGCAAGAAGAAATGAGTAATAAGAACAGTGGGTTCCCTCCGCTGGGGATGGAGGAGGAAGAACTTGGGTTTATGGAGGCTGAAGCGGCTCCAAGTGTGTGCAAAGTGGAAATGGAGCAAATGGGTGGGCGTGAAACTAGTGATTCCAAAATGGGTGTCGCAGAATCCAGGAAAAGAACCAGTAACAAGGCTAAGAAGATTGAAGGACAGCCCTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCCATGCTCAGAGCAATAGTCCCTAAAATAAGCAAGGTGCTTCTTTTTTCTGTCTTTGTAATGGAAATTCCCACTGTTTTCTTCTCTCTTTTTTTATTTATAATTATTTTTATGTAAAGCAGATGGATAGAACGTCTATACTTGGAGACACGATCGATTATGTGAAAGAGCTGCTAGAAAGAATCAATAACTTGAAAGAAGAAGATGAATTTGGTTTAGATTCGAATCACGTGGGCTTCAATGGGATCTCCAAGGAAGGGAAGCCCAATGAAGTTCAAGTGAGAAATTCCCCAAAGGTGTGTTATTTTTGTTGTTACTGTTAAGTTTTAGTCCGCCATTGCTTAGCTAATGGTTGGAGCTTTGTTGTTCGTGACACACAGTTCGATATTGAAAAGAGGGAGAGTAAGACTCGAATCGACATTTGCTGTGCGACGAGGCCAGGGTTATTGCTGTCCACTGTGAACACATTAGAAGCATTGGGGCTTGAGATTCAACAGTGTGTGATTAGCTGCTTCAATGATTTCTCGATGCAAGCTTGTTGTTCAGAGGTTTTGTTTTGTTGTGTTTTGTTTCTTTCTTTTGGGTTGTAATATTTCGATGTCTGTGCGTCTCTTTTTTCTGAATGTGTTAAATAAAAAAATGTTGGTCTTTTTTCTGTCAGCAGGGAAGCGGTGAGAAAGCAGTGGCAAGTTCAGATGATGTAAAGGAGGCACTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAGTGGAAACACTTGAATAAATCGGAGGGGGAAAGAACATCAATGGTGTTGTTCAAAGGGATGAAATGAATCGGCTGCAATTTGAAATAATTGATCCGGAACCCTCTTTCCAATAATTAATCTGGGTTTTATTTGGTGCATTTAGTGATTAGACTTAGAATACCCAAAATGAAATCCCAATAATGTACTGAAGGAAATGAACAAAAGAGTTCCATTTTTCATGAAAGTACTCACTTTTCTTGCTTGGCTTCAGATTATAGCAATCACTTCTTCATGTTTTCC

mRNA sequence

ATATGCAGTATACCATGATGATCACTTTTTTTTATTTTTTTTATTTTTATAGATTTAAAAATAAAATTAAAAAAACCCCTTCCTTTTTTATCTTTTTGTTTATTATAATATTTCCCCAACTTGGTGCAACTCCATGTTCATTACACTCTGTTCTCCACTTTCTTCAGGCCAAAAGAGGGAAGAACAACCAACAAAATGGAGCTCAGTCAACATGGTTTCTTAGAGGAGTTATTAGCTTCCACGCCTTGGTCCTCTTCTTATTCAAATGGCTTCAATGATTTCTTCCAAAATACCTGGAATTTCGGTTGTTTTGATGAAAATCCCCAAATGGGTACCTCTATTTCCCCCCATTTTCCCGCTCTCCAAACTGCTACTGATTTTTCCTTCGCCGACCAATACCTCTACACCAATTTTCTCGAAGGCTTTGCAATGCCGGAGCTCGATTCTTCATCGTACACTAGGAATAACGAAACCCCACCATTCGTTTCGCAAGAAGAAATGAGTAATAAGAACAGTGGGTTCCCTCCGCTGGGGATGGAGGAGGAAGAACTTGGGTTTATGGAGGCTGAAGCGGCTCCAAGTGTGTGCAAAGTGGAAATGGAGCAAATGGGTGGGCGTGAAACTAGTGATTCCAAAATGGGTGTCGCAGAATCCAGGAAAAGAACCAGTAACAAGGCTAAGAAGATTGAAGGACAGCCCTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCCATGCTCAGAGCAATAGTCCCTAAAATAAGCAAGATGGATAGAACGTCTATACTTGGAGACACGATCGATTATGTGAAAGAGCTGCTAGAAAGAATCAATAACTTGAAAGAAGAAGATGAATTTGGTTTAGATTCGAATCACGTGGGCTTCAATGGGATCTCCAAGGAAGGGAAGCCCAATGAAGTTCAAGTGAGAAATTCCCCAAAGTTCGATATTGAAAAGAGGGAGAGTAAGACTCGAATCGACATTTGCTGTGCGACGAGGCCAGGGTTATTGCTGTCCACTGTGAACACATTAGAAGCATTGGGGCTTGAGATTCAACAGTGTGTGATTAGCTGCTTCAATGATTTCTCGATGCAAGCTTGTTGTTCAGAGGGAAGCGGTGAGAAAGCAGTGGCAAGTTCAGATGATGTAAAGGAGGCACTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAGTGGAAACACTTGAATAAATCGGAGGGGGAAAGAACATCAATGGTGTTGTTCAAAGGGATGAAATGAATCGGCTGCAATTTGAAATAATTGATCCGGAACCCTCTTTCCAATAATTAATCTGGGTTTTATTTGGTGCATTTAGTGATTAGACTTAGAATACCCAAAATGAAATCCCAATAATGTACTGAAGGAAATGAACAAAAGAGTTCCATTTTTCATGAAAGTACTCACTTTTCTTGCTTGGCTTCAGATTATAGCAATCACTTCTTCATGTTTTCC

Coding sequence (CDS)

ATGGAGCTCAGTCAACATGGTTTCTTAGAGGAGTTATTAGCTTCCACGCCTTGGTCCTCTTCTTATTCAAATGGCTTCAATGATTTCTTCCAAAATACCTGGAATTTCGGTTGTTTTGATGAAAATCCCCAAATGGGTACCTCTATTTCCCCCCATTTTCCCGCTCTCCAAACTGCTACTGATTTTTCCTTCGCCGACCAATACCTCTACACCAATTTTCTCGAAGGCTTTGCAATGCCGGAGCTCGATTCTTCATCGTACACTAGGAATAACGAAACCCCACCATTCGTTTCGCAAGAAGAAATGAGTAATAAGAACAGTGGGTTCCCTCCGCTGGGGATGGAGGAGGAAGAACTTGGGTTTATGGAGGCTGAAGCGGCTCCAAGTGTGTGCAAAGTGGAAATGGAGCAAATGGGTGGGCGTGAAACTAGTGATTCCAAAATGGGTGTCGCAGAATCCAGGAAAAGAACCAGTAACAAGGCTAAGAAGATTGAAGGACAGCCCTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCCATGCTCAGAGCAATAGTCCCTAAAATAAGCAAGATGGATAGAACGTCTATACTTGGAGACACGATCGATTATGTGAAAGAGCTGCTAGAAAGAATCAATAACTTGAAAGAAGAAGATGAATTTGGTTTAGATTCGAATCACGTGGGCTTCAATGGGATCTCCAAGGAAGGGAAGCCCAATGAAGTTCAAGTGAGAAATTCCCCAAAGTTCGATATTGAAAAGAGGGAGAGTAAGACTCGAATCGACATTTGCTGTGCGACGAGGCCAGGGTTATTGCTGTCCACTGTGAACACATTAGAAGCATTGGGGCTTGAGATTCAACAGTGTGTGATTAGCTGCTTCAATGATTTCTCGATGCAAGCTTGTTGTTCAGAGGGAAGCGGTGAGAAAGCAGTGGCAAGTTCAGATGATGTAAAGGAGGCACTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAG

Protein sequence

MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTATDFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELGFMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL

Homology

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BLAST of Cp4.1LG10g01520 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.6e-64
Identity = 171/361 (47.37%), Postives = 223/361 (61.77%), Query Frame = 0


Query: 1   MELS-QHGFLEELLASTPWSS--------SYSNGF----NDFFQNTWN--FGCF-DENPQ 60
           MELS Q    EELL  T   +        S++ GF    + FF N +N  + CF +E   
Sbjct: 1   MELSTQMNVFEELLVPTKQETTDNNINNLSFNGGFDHHHHQFFPNGYNIDYLCFNNEEED 60

Query: 61  MGTSISP-HFPALQTATDFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMS 120
             T + P  F  L +        Q      L+  + P   S++     + P   + +E+ 
Sbjct: 61  ENTLLYPSSFMDLISQPPPLLLHQ---PPPLQPLSPPLSSSATAGATFDYPFLEALQEII 120

Query: 121 NKNSGFPPLGMEE-EELGFMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAK 180
           + +S  PPL ++  +E  F    + PS     ME    +  S    G   ++K    K+K
Sbjct: 121 DSSSSSPPLILQNGQEENFNNPMSYPSPL---MESDQSKSFSVGYCGGETNKK----KSK 180

Query: 181 KIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNL 240
           K+EGQPSKNLMAERRRRKRLNDRLSMLR+IVPKISKMDRTSILGD IDY+KELL++IN L
Sbjct: 181 KLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKL 240

Query: 241 K-EEDEFGLDSN--HVGFNGISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLL 300
           + EE E G  +N  H    G  K+   NE  VRNSPKF+I++R+  TR+DICC+ +PGLL
Sbjct: 241 QDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLL 300

Query: 301 LSTVNTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKC 341
           LSTVNTLE LGLEI+QCVISCF+DFS+QA CSEG+ ++   +S+D+K+ALFRNAGYGG C
Sbjct: 301 LSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQALFRNAGYGGSC 351

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BLAST of Cp4.1LG10g01520 vs. ExPASy Swiss-Prot
Match: Q10S44 (Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.3e-56
Identity = 117/182 (64.29%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 163 KIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNL 222
           K+ G PSKNLMAERRRRKRLNDRLSMLR+IVPKISKMDRTSILGDTIDYVKEL ERI  L
Sbjct: 175 KLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTL 234

Query: 223 KEEDEFGLDSNHVGFNGISKE---GKPNEVQVRNSPKFDIEKRES-KTRIDICCATRPGL 282
             E+E G+    +      K+   G  NE+ VRNS KFD+E R S  TRI+ICC   PG+
Sbjct: 235 --EEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPANPGV 294

Query: 283 LLSTVNTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGK 341
           LLSTV+ LE LGLEI+QCV+SCF+DF MQA C +  G++ V S+D++K+ LFR+AGYGG+
Sbjct: 295 LLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIKQTLFRSAGYGGR 354

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BLAST of Cp4.1LG10g01520 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.3e-56
Identity = 140/292 (47.95%), Postives = 184/292 (63.01%), Query Frame = 0


Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRN--NETPPFVSQ-EEMSNKNSGFPPLGME-- 120
           D++F D   + N L+     +  SSS   N  ++ PP + Q  + S+     PPL     
Sbjct: 33  DWNF-DYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQPPQPSSPLYDSPPLSSAFD 92

Query: 121 ---EEELGFMEAEAAPSVCKVEMEQMGG----RETSDSKMGVAESRKRTSNKAKKIEGQP 180
               E++        P +     E         E S S + + E+ K+ SN  KK+EGQP
Sbjct: 93  YPFLEDIIHSSYSPPPLILPASQENTNNYSPLMEESKSFISIGETNKKRSN--KKLEGQP 152

Query: 181 SKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEF 240
           SKNLMAERRRRKRLNDRLS+LR+IVPKI+KMDRTSILGD IDY+KELL++IN L+E    
Sbjct: 153 SKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQE---- 212

Query: 241 GLDSNHVGFNGISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEA 300
             D   +G N        NE  VRNS KF++++RE  T IDICC T+PGL++STV+TLE 
Sbjct: 213 --DEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLET 272

Query: 301 LGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 341
           LGLEI+QCVISCF+DFS+QA C E   ++ + +S+  K+AL RNAGYGG+CL
Sbjct: 273 LGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

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BLAST of Cp4.1LG10g01520 vs. ExPASy Swiss-Prot
Match: Q336V8 (Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH004 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.9e-43
Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 0


Query: 166 GQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE 225
           G PSKNLMAERRRRKRLNDRLSMLR++VP+ISKMDRTSILGDTI YVKEL++RI NL+ E
Sbjct: 192 GAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251

Query: 226 DEFGLDSNHVGFN------------GISKEGKPNEVQVRNSPKFDIEKRES-KTRIDICC 285
              G  S+    N              S  G+   + +RNS +F++E+RE+  TRI++ C
Sbjct: 252 AATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPL-IRNSTRFEVERRENGSTRIEMAC 311

Query: 286 ATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVA-SSDDVKEALFR 341
           A  P LL ST+  LEALG+EI+QCVISCF+DF+MQA C +   ++ +   ++++K+ LFR
Sbjct: 312 AAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFR 371

[Close]

BLAST of Cp4.1LG10g01520 vs. ExPASy Swiss-Prot
Match: Q9LPW3 (Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.8e-31
Identity = 113/330 (34.24%), Postives = 160/330 (48.48%), Query Frame = 0


Query: 58  TATDFSFADQYLYTNFLEGFAMPELDSSSYT-RNNETPPFVSQEEMSNKNSGFPPLGMEE 117
           T  DF F   +L   F      P  +S ++T  N+  P F+   E S+ + G  PL    
Sbjct: 123 TFDDFGFDSGFLGQQFHGNHQSP--NSMNFTGLNHSVPDFLPAPENSSGSCGLSPLFSNR 182

Query: 118 --------------------EELGFMEAEAAPSVCKVE-----MEQMGGRETSDSKMGV- 177
                               ++   M   ++  +C  E      +    RE  D+  G+ 
Sbjct: 183 AKVLKPLQVMASSGSQPTLFQKRAAMRQSSSSKMCNSESSSEMRKSSYEREIDDTSTGII 242

Query: 178 --------AESRKRTSNKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRT 237
                   ++     +NK KK +G P+KNLMAERRRRK+LNDRL MLR++VPKISKMDR 
Sbjct: 243 DISGLNYESDDHNTNNNKGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 302

Query: 238 SILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGISKEGKPNEVQVR---------- 297
           SILGD IDY+KELL+RIN+L  E E    S+    + ++   +    +V+          
Sbjct: 303 SILGDAIDYLKELLQRINDLHTELESTPPSSS-SLHPLTPTPQTLSYRVKEELCPSSSLP 362

Query: 298 ----NSPKFDIEKRESK-TRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQ 338
                 P+ ++  RE K   I + C  RPGLLLST+  L+ LGL++QQ VISCFN F++ 
Sbjct: 363 SPKGQQPRVEVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALD 422

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BLAST of Cp4.1LG10g01520 vs. NCBI nr
Match: XP_023543336.1 (transcription factor bHLH93-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 674 bits (1739), Expect = 2.62e-244
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG
Sbjct: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 340

[Close]

BLAST of Cp4.1LG10g01520 vs. NCBI nr
Match: XP_023543335.1 (transcription factor bHLH93-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 669 bits (1727), Expect = 1.84e-242
Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG
Sbjct: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSE-GSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSE GSGEKAVASSDDVKEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEQGSGEKAVASSDDVKEALFRNAGYGGKCL 341

[Close]

BLAST of Cp4.1LG10g01520 vs. NCBI nr
Match: XP_022949639.1 (transcription factor bHLH93-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 666 bits (1719), Expect = 2.93e-241
Identity = 334/340 (98.24%), Postives = 339/340 (99.71%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ+LYTNF+EGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPP+GMEEEELG
Sbjct: 61  DFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRET+DSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFN I
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNAI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSEGSGEKAVASSDD+KEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEGSGEKAVASSDDIKEALFRNAGYGGKCL 340

[Close]

BLAST of Cp4.1LG10g01520 vs. NCBI nr
Match: XP_022949638.1 (transcription factor bHLH93-like isoform X1 [Cucurbita moschata] >KAG7034243.1 Transcription factor bHLH93 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 662 bits (1707), Expect = 2.06e-239
Identity = 334/341 (97.95%), Postives = 339/341 (99.41%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ+LYTNF+EGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPP+GMEEEELG
Sbjct: 61  DFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRET+DSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFN I
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNAI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSE-GSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSE GSGEKAVASSDD+KEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEQGSGEKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Cp4.1LG10g01520 vs. NCBI nr
Match: KAG6604077.1 (Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 660 bits (1703), Expect = 8.37e-239
Identity = 333/341 (97.65%), Postives = 338/341 (99.12%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ+LYTNF+EGF MPELDSSSYTRNNETPPFVSQEEMSNKNSGFPP+GMEEEELG
Sbjct: 61  DFSFADQHLYTNFIEGFTMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRET+DSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFN I
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNAI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSE-GSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSE GSGEKAVASSDD+KEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEQGSGEKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Cp4.1LG10g01520 vs. ExPASy TrEMBL
Match: A0A6J1GDE8 (transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452970 PE=4 SV=1)

HSP 1 Score: 666 bits (1719), Expect = 1.42e-241
Identity = 334/340 (98.24%), Postives = 339/340 (99.71%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ+LYTNF+EGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPP+GMEEEELG
Sbjct: 61  DFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRET+DSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFN I
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNAI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSEGSGEKAVASSDD+KEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEGSGEKAVASSDDIKEALFRNAGYGGKCL 340

[Close]

BLAST of Cp4.1LG10g01520 vs. ExPASy TrEMBL
Match: A0A6J1GCM1 (transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452970 PE=4 SV=1)

HSP 1 Score: 662 bits (1707), Expect = 9.95e-240
Identity = 334/341 (97.95%), Postives = 339/341 (99.41%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ+LYTNF+EGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPP+GMEEEELG
Sbjct: 61  DFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRET+DSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFN I
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNAI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSE-GSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSE GSGEKAVASSDD+KEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEQGSGEKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Cp4.1LG10g01520 vs. ExPASy TrEMBL
Match: A0A6J1IPK2 (transcription factor bHLH93-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478784 PE=4 SV=1)

HSP 1 Score: 650 bits (1677), Expect = 3.58e-235
Identity = 327/340 (96.18%), Postives = 334/340 (98.24%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNF CFDENPQMGTSIS HFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFSCFDENPQMGTSISSHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ+LY NFLEG AMPELDSSSYT+NNETPPFVSQEEMSN+NSGFPP+GMEEEELG
Sbjct: 61  DFSFADQHLYANFLEGLAMPELDSSSYTKNNETPPFVSQEEMSNRNSGFPPVGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRET+DSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSN VGFNGI
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNQVGFNGI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKF IEKRESKTRIDICC+TRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFAIEKRESKTRIDICCSTRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSEGSGEKAVASSDD+KEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEGSGEKAVASSDDIKEALFRNAGYGGKCL 340

[Close]

BLAST of Cp4.1LG10g01520 vs. ExPASy TrEMBL
Match: A0A6J1IRY6 (transcription factor bHLH93-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478784 PE=4 SV=1)

HSP 1 Score: 645 bits (1665), Expect = 2.51e-233
Identity = 327/341 (95.89%), Postives = 334/341 (97.95%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNF CFDENPQMGTSIS HFPALQTAT
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFSCFDENPQMGTSISSHFPALQTAT 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ+LY NFLEG AMPELDSSSYT+NNETPPFVSQEEMSN+NSGFPP+GMEEEELG
Sbjct: 61  DFSFADQHLYANFLEGLAMPELDSSSYTKNNETPPFVSQEEMSNRNSGFPPVGMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FMEAEAAPSVCKVEMEQMGGRET+DSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGI 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSN VGFNGI
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNQVGFNGI 240

Query: 241 SKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISC 300
           SKEGKPNEVQVRNSPKF IEKRESKTRIDICC+TRPGLLLSTVNTLEALGLEIQQCVISC
Sbjct: 241 SKEGKPNEVQVRNSPKFAIEKRESKTRIDICCSTRPGLLLSTVNTLEALGLEIQQCVISC 300

Query: 301 FNDFSMQACCSE-GSGEKAVASSDDVKEALFRNAGYGGKCL 340
           FNDFSMQACCSE GSGEKAVASSDD+KEALFRNAGYGGKCL
Sbjct: 301 FNDFSMQACCSEQGSGEKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Cp4.1LG10g01520 vs. ExPASy TrEMBL
Match: A0A1S3B0U8 (transcription factor bHLH93 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484909 PE=4 SV=1)

HSP 1 Score: 582 bits (1501), Expect = 2.36e-208
Identity = 296/341 (86.80%), Postives = 317/341 (92.96%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60
           MELSQHGFLEELLASTPW+SSYSNGFNDFFQN WNF  FDENPQMG+S  P+FP +QTA 
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFSSFDENPQMGSSTFPNFPTIQTAN 60

Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPLGMEEEELG 120
           DFSFADQ LY+NFLEGFAMPELDSSSYT+NNETPPFVSQEEMSNKN+G+PP+ MEEEELG
Sbjct: 61  DFSFADQQLYSNFLEGFAMPELDSSSYTKNNETPPFVSQEEMSNKNNGYPPVAMEEEELG 120

Query: 121 FMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180
           FME+E APSVCKVEMEQMG RE + S MG+AE  KR+SNKAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMESETAPSVCKVEMEQMGVREINGSIMGIAELGKRSSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVG-FNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE E GLDSNHVG FNG
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE-ETGLDSNHVGLFNG 240

Query: 241 ISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQCVIS 300
           IS EGK NEVQVRNSPKFD+E++E +TRIDICCATRPGLLLSTVNTLEALGLEIQQCVIS
Sbjct: 241 ISNEGKSNEVQVRNSPKFDVERKEKETRIDICCATRPGLLLSTVNTLEALGLEIQQCVIS 300

Query: 301 CFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 340
           CFNDFSMQA C+EGS +KAVASSDD+K+ALFRNAGYGGKCL
Sbjct: 301 CFNDFSMQASCAEGSAQKAVASSDDIKDALFRNAGYGGKCL 340

[Close]

BLAST of Cp4.1LG10g01520 vs. TAIR 10
Match: AT5G65640.1 (beta HLH protein 93 )

HSP 1 Score: 246.1 bits (627), Expect = 4.0e-65
Identity = 171/361 (47.37%), Postives = 223/361 (61.77%), Query Frame = 0


Query: 1   MELS-QHGFLEELLASTPWSS--------SYSNGF----NDFFQNTWN--FGCF-DENPQ 60
           MELS Q    EELL  T   +        S++ GF    + FF N +N  + CF +E   
Sbjct: 1   MELSTQMNVFEELLVPTKQETTDNNINNLSFNGGFDHHHHQFFPNGYNIDYLCFNNEEED 60

Query: 61  MGTSISP-HFPALQTATDFSFADQYLYTNFLEGFAMPELDSSSYTRNNETPPFVSQEEMS 120
             T + P  F  L +        Q      L+  + P   S++     + P   + +E+ 
Sbjct: 61  ENTLLYPSSFMDLISQPPPLLLHQ---PPPLQPLSPPLSSSATAGATFDYPFLEALQEII 120

Query: 121 NKNSGFPPLGMEE-EELGFMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAK 180
           + +S  PPL ++  +E  F    + PS     ME    +  S    G   ++K    K+K
Sbjct: 121 DSSSSSPPLILQNGQEENFNNPMSYPSPL---MESDQSKSFSVGYCGGETNKK----KSK 180

Query: 181 KIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNL 240
           K+EGQPSKNLMAERRRRKRLNDRLSMLR+IVPKISKMDRTSILGD IDY+KELL++IN L
Sbjct: 181 KLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKL 240

Query: 241 K-EEDEFGLDSN--HVGFNGISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLL 300
           + EE E G  +N  H    G  K+   NE  VRNSPKF+I++R+  TR+DICC+ +PGLL
Sbjct: 241 QDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLL 300

Query: 301 LSTVNTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKC 341
           LSTVNTLE LGLEI+QCVISCF+DFS+QA CSEG+ ++   +S+D+K+ALFRNAGYGG C
Sbjct: 301 LSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQALFRNAGYGGSC 351

[Close]

BLAST of Cp4.1LG10g01520 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.3e-57
Identity = 140/292 (47.95%), Postives = 184/292 (63.01%), Query Frame = 0


Query: 61  DFSFADQYLYTNFLEGFAMPELDSSSYTRN--NETPPFVSQ-EEMSNKNSGFPPLGME-- 120
           D++F D   + N L+     +  SSS   N  ++ PP + Q  + S+     PPL     
Sbjct: 33  DWNF-DYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQPPQPSSPLYDSPPLSSAFD 92

Query: 121 ---EEELGFMEAEAAPSVCKVEMEQMGG----RETSDSKMGVAESRKRTSNKAKKIEGQP 180
               E++        P +     E         E S S + + E+ K+ SN  KK+EGQP
Sbjct: 93  YPFLEDIIHSSYSPPPLILPASQENTNNYSPLMEESKSFISIGETNKKRSN--KKLEGQP 152

Query: 181 SKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEF 240
           SKNLMAERRRRKRLNDRLS+LR+IVPKI+KMDRTSILGD IDY+KELL++IN L+E    
Sbjct: 153 SKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQE---- 212

Query: 241 GLDSNHVGFNGISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEA 300
             D   +G N        NE  VRNS KF++++RE  T IDICC T+PGL++STV+TLE 
Sbjct: 213 --DEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLET 272

Query: 301 LGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAGYGGKCL 341
           LGLEI+QCVISCF+DFS+QA C E   ++ + +S+  K+AL RNAGYGG+CL
Sbjct: 273 LGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

[Close]

BLAST of Cp4.1LG10g01520 vs. TAIR 10
Match: AT1G12860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-32
Identity = 113/330 (34.24%), Postives = 160/330 (48.48%), Query Frame = 0


Query: 58  TATDFSFADQYLYTNFLEGFAMPELDSSSYT-RNNETPPFVSQEEMSNKNSGFPPLGMEE 117
           T  DF F   +L   F      P  +S ++T  N+  P F+   E S+ + G  PL    
Sbjct: 123 TFDDFGFDSGFLGQQFHGNHQSP--NSMNFTGLNHSVPDFLPAPENSSGSCGLSPLFSNR 182

Query: 118 --------------------EELGFMEAEAAPSVCKVE-----MEQMGGRETSDSKMGV- 177
                               ++   M   ++  +C  E      +    RE  D+  G+ 
Sbjct: 183 AKVLKPLQVMASSGSQPTLFQKRAAMRQSSSSKMCNSESSSEMRKSSYEREIDDTSTGII 242

Query: 178 --------AESRKRTSNKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRT 237
                   ++     +NK KK +G P+KNLMAERRRRK+LNDRL MLR++VPKISKMDR 
Sbjct: 243 DISGLNYESDDHNTNNNKGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 302

Query: 238 SILGDTIDYVKELLERINNLKEEDEFGLDSNHVGFNGISKEGKPNEVQVR---------- 297
           SILGD IDY+KELL+RIN+L  E E    S+    + ++   +    +V+          
Sbjct: 303 SILGDAIDYLKELLQRINDLHTELESTPPSSS-SLHPLTPTPQTLSYRVKEELCPSSSLP 362

Query: 298 ----NSPKFDIEKRESK-TRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQ 338
                 P+ ++  RE K   I + C  RPGLLLST+  L+ LGL++QQ VISCFN F++ 
Sbjct: 363 SPKGQQPRVEVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALD 422

[Close]

BLAST of Cp4.1LG10g01520 vs. TAIR 10
Match: AT3G26744.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-32
Identity = 100/243 (41.15%), Postives = 130/243 (53.50%), Query Frame = 0


Query: 113 GMEEEELGFMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNL 172
           G+E   L +   E   S    E  Q+GG                   K KK +G P+KNL
Sbjct: 268 GIEVSGLNYESDEINESGKAAESVQIGG-----------------GGKGKK-KGMPAKNL 327

Query: 173 MAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEF---- 232
           MAERRRRK+LNDRL MLR++VPKISKMDR SILGD IDY+KELL+RIN+L  E E     
Sbjct: 328 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG 387

Query: 233 GLDSNHVGFNGISKEGKPNEVQVRN--------SPK-----FDIEKRESK-TRIDICCAT 292
            L      F+ ++   +    +V+         SPK      ++  RE +   I + C  
Sbjct: 388 SLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGR 447

Query: 293 RPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAG 338
           RPGLLL+T+  L+ LGL++QQ VISCFN F++    +E   E      D +K  LF  AG
Sbjct: 448 RPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAG 492

[Close]

BLAST of Cp4.1LG10g01520 vs. TAIR 10
Match: AT3G26744.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-32
Identity = 100/243 (41.15%), Postives = 130/243 (53.50%), Query Frame = 0


Query: 113 GMEEEELGFMEAEAAPSVCKVEMEQMGGRETSDSKMGVAESRKRTSNKAKKIEGQPSKNL 172
           G+E   L +   E   S    E  Q+GG                   K KK +G P+KNL
Sbjct: 268 GIEVSGLNYESDEINESGKAAESVQIGG-----------------GGKGKK-KGMPAKNL 327

Query: 173 MAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEF---- 232
           MAERRRRK+LNDRL MLR++VPKISKMDR SILGD IDY+KELL+RIN+L  E E     
Sbjct: 328 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPG 387

Query: 233 GLDSNHVGFNGISKEGKPNEVQVRN--------SPK-----FDIEKRESK-TRIDICCAT 292
            L      F+ ++   +    +V+         SPK      ++  RE +   I + C  
Sbjct: 388 SLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGR 447

Query: 293 RPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDVKEALFRNAG 338
           RPGLLL+T+  L+ LGL++QQ VISCFN F++    +E   E      D +K  LF  AG
Sbjct: 448 RPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAG 492

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g01520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSL1	5.6e-64	47.37	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]
Q10S44	3.3e-56	64.29	Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=...	[more]
Q9LXA9	3.3e-56	47.95	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
Q336V8	1.9e-43	53.97	Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=B...	[more]
Q9LPW3	2.8e-31	34.24	Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1	[more]

BLAST of Cp4.1LG10g01520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543336.1	2.62e-244	100.00	transcription factor bHLH93-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023543335.1	1.84e-242	99.71	transcription factor bHLH93-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949639.1	2.93e-241	98.24	transcription factor bHLH93-like isoform X2 [Cucurbita moschata]	[more]
XP_022949638.1	2.06e-239	97.95	transcription factor bHLH93-like isoform X1 [Cucurbita moschata] >KAG7034243.1 T...	[more]
KAG6604077.1	8.37e-239	97.65	Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma ...	[more]

BLAST of Cp4.1LG10g01520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDE8	1.42e-241	98.24	transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1GCM1	9.95e-240	97.95	transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IPK2	3.58e-235	96.18	transcription factor bHLH93-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1IRY6	2.51e-233	95.89	transcription factor bHLH93-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3B0U8	2.36e-208	86.80	transcription factor bHLH93 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484909 P...	[more]

BLAST of Cp4.1LG10g01520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65640.1	4.0e-65	47.37	beta HLH protein 93	[more]
AT5G10570.1	2.3e-57	47.95	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12860.1	2.0e-32	34.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.1	2.0e-32	41.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.2	2.0e-32	41.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..167
None	No IPR available	PANTHER	PTHR31945:SF116	SUBFAMILY NOT NAMED	coord: 2..340
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 2..340
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 266..307 e-value: 0.00260587 score: 34.0609
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 172..221 e-value: 2.0E-11 score: 53.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 172..215 e-value: 1.9E-9 score: 37.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 166..215 score: 15.192548
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 167..232 e-value: 3.2E-13 score: 51.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 169..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g01520.1	Cp4.1LG10g01520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding