Cp4.1LG07g07310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g07310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description40S ribosomal protein S8
LocationCp4.1LG07: 6337717 .. 6340801 (+)
RNA-Seq ExpressionCp4.1LG07g07310
SyntenyCp4.1LG07g07310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAACAGAGTGAACCCAAACCGAAGGCTAATTAAACCTAACCCACGCCGCATCAAAACCCCTCTCAATCTCTCTTCCGTCTCTCTCTCTCTCGGCTTCTCTCGGTCGCTCAAGGTTTGTTCGTGATTGAATGCCTTTTGTTCTTTTCAAGTTTTTTATTGGATTTCTGTTGTTGCAATCACAATTGGATGTTTGTTTTGCTCCGTCTCTCATTCTCACTGTTTTAGAATGTTGTTTCAATGTTAAATATTGGAGATTTATTAGTAATCGGTGTCATTTGATGGTTATTATCGCTGCTTCGTTTTAATACCGATGCGATTTTAGGTAATTTGGTGTTTAGTACTTTGTCCAGACTGAGAATGGTGGTTTTGGCGAATGCCTGGTTTAATTCTTCTGTTTTTGACATTCTGGATACTCTTTGCAATTGTTCATTTTCCTTATTGATTTCCAGCTTTAGACTGGTTCTAGGATTATCAACTTTCCAGAGATCTGATTAGTTTCTCCTTAGCTTTTGTTCGTTTGGTTATATTATCGGAGGTTATTATTCTGAAGATGTAAGAACTTTTATAACTTCCGAGGTAACTACTAATTTGATGGTCTTAATGAAGTTTGGAACTTTTTAAGTTTGGTAATAGTTATTAGTGACCTCTGGTGTTTCTGATATTTGGAGCTTTAAGAGAAGGTTTACTGTCATGTGTGGGTTTGATTTTGGGTTGGGTTGGGTTGGGACATCGGTTTGCTATAAACGGTTCGATCATGTTTATATTCCCAGACGAATCTAATCTAACCTGTGTAAAGCCTTAGTAATCAATGAAAGCATTCTTGCCCCAATGTAACAAAGACCTCTTATACTGTAGAACTAAACCCGACAAAATATTTGGCCAATCTAAGAATATAGATTATGAAATGAAAAATATATGGAGGTCTATAGCCTCTTCAGGAAATCTACTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTTCCCCGCTCTTTATATCTTTCTTGTTTTCCTTGGAAGTGTGGGGTTTTAGGGTTTGAGAGCTATTTGATGTTTGTTTCAGGAACCCTAGACAGCTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTGCCAAGATGGGTATGTTAAACACAACTTTCCTCATTGTTCTACATATCTCAATTTTTCGTTGTTTCTTTTTATTAATCTTGGAGGACTTTTTGTTGTTAGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTAATTACTACTTCTATTCAGCTGAGTGCAATTTGTATCAGTTTTTGCTTTCATTGCATTTTTTGCCAACTGATCAACAAAAATTTTGTACTTTTCTTTCTATTCTTGGTTTTTGCGGTGATTTGTAGGTTTAGCTGAGATATTTATTATTATTATTATTGTGGATAACTGGTGAAGTAAGTGGTGGCAAGAGTTTGTTGTTTGTTATCTTTTTCAATATATATTTCAATAATCTCGATTAATCTGCATTATTTATCTAATCTCCTCTGGTTGATTTTTGTATATTTCTGTTCTAAATAAATTGCTCGTCCCATGTTACATTTTCACATTTGTTTAATGAACAGCATAATTTCTCCTATTGATGTAGAAACCTAGTTTCTTTGAATATTTGTGCTGTGTTACAGTTTGATGTTTTACAATGTAAAAGTTGAAATGTTTCCTTCTGTAAGTTATATTTATTATGCTTTGGTACTGAAAGTTCAACCATCACAGAAAAATTTATGTCGATTCAAGGTACAACTTTCATTTTCTCTTCATGTTTGCAGTCCTTTTGATATTGCATCTTTCCCTTTGTTTGTAAAGGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGTAGAGCAACACTTGATCCAAAATACAACCTAATTTTGATGGATAATTATGACATTCTTAATATTTATGATACAAAACTTGTTCCAAAATACAACTTAATTTTAATGGTTTATAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGGTAAGCATTATGAATCTCATAACGATTCTTGATTCTCTTGTGTTCTTTCAAACACGTTGAGCAAAATCATTGAACGTGGAGAAGAGTTTTTGGTTTATGTTGCCTGAGGCCTTGCAAATTTTTGACAGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAGATTTTGTTGTCGAGTTCTTTTCGGCTCGAGTTTCTTGTTCCTAATTCTTCGTAGGACGCCAATGATTGCAGCTGAGATGAAACTGCTATTTTGGAACTTCAGTTTTGCTGGTAATAGTTTAATTACAATACCTAGCGATTTTCATGTTAACAACAGTTTGTTTATTAGCTTTAAAAGCTTTAAAGTTTAATTGTTTCCCAGTCTATCGTCTCTCCAATTCCCTTCCATTCCTTTCGACGCTTTTCAATTGATGATCACAGTAGTTTTTTATTCGGTTTCAATTGTATGCATGGACTTGGAAATTGTGCATAAAGAAAGAATTTATGACTAATTTGTTTTTAATTCAAAAGTGAATGTATGATATAAGCCCTATAACTTGTGGTTGCA

mRNA sequence

AAGAACAGAGTGAACCCAAACCGAAGGCTAATTAAACCTAACCCACGCCGCATCAAAACCCCTCTCAATCTCTCTTCCGTCTCTCTCTCTCTCGGCTTCTCTCGGTCGCTCAAGGAACCCTAGACAGCTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTGCCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAGATTTTGTTGTCGAGTTCTTTTCGGCTCGAGTTTCTTGTTCCTAATTCTTCGTAGGACGCCAATGATTGCAGCTGAGATGAAACTGCTATTTTGGAACTTCAGTTTTGCTGGTAATAGTTTAATTACAATACCTAGCGATTTTCATGTTAACAACAGTTTGTTTATTAGCTTTAAAAGCTTTAAAGTTTAATTGTTTCCCAGTCTATCGTCTCTCCAATTCCCTTCCATTCCTTTCGACGCTTTTCAATTGATGATCACAGTAGTTTTTTATTCGGTTTCAATTGTATGCATGGACTTGGAAATTGTGCATAAAGAAAGAATTTATGACTAATTTGTTTTTAATTCAAAAGTGAATGTATGATATAAGCCCTATAACTTGTGGTTGCA

Coding sequence (CDS)

ATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAG

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
Homology
[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102
Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTTASSKKEE--EADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK  A+ K  E  +A+A TEE KKSNHV RK+EKRQQ R LD HIEEQF SGRL+
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 371.3 bits (952), Expect = 7.4e-102
Identity = 189/221 (85.52%), Postives = 204/221 (92.31%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTTASSK---KEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT A+ K   + +E +AA EE KKSNHV RK+EKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.7e-101
Identity = 188/220 (85.45%), Postives = 203/220 (92.27%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSK-KEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMA 180
           +IGRKKKT A+ K   EE +A TEE KKSNHV  K+EKRQQ R LD HIEEQF  G+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           CISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.5e-98
Identity = 180/221 (81.45%), Postives = 202/221 (91.40%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRK+R+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTTASSKK-----EEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+ +S+KK     EE A AA EEVKKSNH+ RKI  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.2e-97
Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+RILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A           TEEVKKSNHVQRK+E RQ+ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGA+
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: XP_023538460.1 (40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo] >KAG6586082.1 40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020908.1 40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426 bits (1096), Expect = 2.38e-150
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: XP_022937545.1 (40S ribosomal protein S8-like [Cucurbita moschata])

HSP 1 Score: 424 bits (1091), Expect = 1.37e-149
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTAASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: XP_022969662.1 (40S ribosomal protein S8-like [Cucurbita maxima])

HSP 1 Score: 423 bits (1087), Expect = 5.60e-149
Identity = 217/219 (99.09%), Postives = 217/219 (99.09%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT  SSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTATSSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419 bits (1076), Expect = 2.66e-147
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT AS+KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: KAG6598870.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418 bits (1075), Expect = 3.78e-147
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT AS+KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTIASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy TrEMBL
Match: A0A6J1FH17 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111443921 PE=3 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 6.65e-150
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT ASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTAASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy TrEMBL
Match: A0A6J1HWY6 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111468617 PE=3 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.71e-149
Identity = 217/219 (99.09%), Postives = 217/219 (99.09%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT  SSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTATSSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy TrEMBL
Match: A0A6J1K537 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 1.29e-147
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT AS+KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy TrEMBL
Match: A0A6J1EP23 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 1.29e-147
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT AS+KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. ExPASy TrEMBL
Match: A0A5D3BT12 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00420 PE=3 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 2.14e-146
Identity = 211/219 (96.35%), Postives = 216/219 (98.63%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+AS+KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 219
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 357.8 bits (917), Expect = 6.1e-99
Identity = 180/221 (81.45%), Postives = 202/221 (91.40%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRK+R+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTTASSKK-----EEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+ +S+KK     EE A AA EEVKKSNH+ RKI  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Cp4.1LG07g07310 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-98
Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+RILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A           TEEVKKSNHVQRK+E RQ+ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGA+
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g07310 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P491991.1e-10286.8240S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S... [more]
Q080697.4e-10285.5240S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2[more]
O813613.7e-10185.4540S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1[more]
Q93VG58.5e-9881.4540S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1[more]
Q9FIF34.2e-9783.1140S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1[more]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023538460.12.38e-150100.0040S ribosomal protein S8-like [Cucurbita pepo subsp. pepo] >KAG6586082.1 40S rib... [more]
XP_022937545.11.37e-14999.5440S ribosomal protein S8-like [Cucurbita moschata][more]
XP_022969662.15.60e-14999.0940S ribosomal protein S8-like [Cucurbita maxima][more]
XP_022929761.12.66e-14797.7240S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal... [more]
KAG6598870.13.78e-14797.7240S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cp4.1LG07g07310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FH176.65e-15099.5440S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111443921 PE=3 SV=1[more]
A0A6J1HWY62.71e-14999.0940S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111468617 PE=3 SV=1[more]
A0A6J1K5371.29e-14797.7240S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1[more]
A0A6J1EP231.29e-14797.7240S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1[more]
A0A5D3BT122.14e-14696.3540S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
BLAST of Cp4.1LG07g07310 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G20290.16.1e-9981.45Ribosomal protein S8e family protein [more]
AT5G59240.13.0e-9883.11Ribosomal protein S8e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 1..196
e-value: 3.7E-55
score: 185.9
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..198
e-value: 2.4E-46
score: 155.0
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..217
NoneNo IPR availableGENE3D3.10.290.70coord: 161..214
e-value: 1.2E-17
score: 66.2
coord: 32..160
e-value: 8.1E-41
score: 140.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..26
NoneNo IPR availablePANTHERPTHR10394:SF1840S RIBOSOMAL PROTEIN S8coord: 1..217
NoneNo IPR availableCDDcd11380Ribosomal_S8e_likecoord: 5..196
e-value: 5.77268E-58
score: 177.712
IPR018283Ribosomal protein S8e, conserved sitePROSITEPS01193RIBOSOMAL_S8Ecoord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g07310.1Cp4.1LG07g07310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome