Cp4.1LG03g16890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG03g16890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionCRS2-associated factor 1, mitochondrial
LocationCp4.1LG03: 12941025 .. 12943546 (-)
RNA-Seq ExpressionCp4.1LG03g16890
SyntenyCp4.1LG03g16890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACCGCGAATTTCATATTACTGTAAAGTCTAAACCGATTTCGCCGATAAACCCTAAACCATTTCCGGTCGCGCGACATTGTTCATCCATGCGCAATCTACCTCATGTTCGTTATCAGACTCTTCCGTCAGAATCCAATTCCGTTTGCTCATCCTCCTACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCTCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCGCGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTTGATTTCCAGTACAGTTACACGGAGACTAGCCTCTCGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGTGAGCTCTCTAGAGAGCACGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGGGAGCCACTGACAGGAGCCGAGAGAAAGACTTTGGTGGAAACTTGTCAAAAGAAGAAAACAAAGAGGCAGATTAATTTGGGTATGTGATACCAAGTTCTATTAATCTATTGTTTGCACATATAAAATTGTTGATCTTGGACGCTGTTTTCTCATCATTTCTAATTGATAGATGCTTCATGGATATTGAGATTATCTTATTTTCTGTGCTTAAATTACTGAGGAATCTGAAAATACGATCTCTATATTGAACGGCTCCGTTGGGATAATTGCATTTTCTTCTAACTACATAACTTCTATGCGTTCGTAGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCTGAGGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGTATGGCTTTCATTTCTTTGGGTGGAGTTTTCTTGTTATAGGCAAATGTTTTAGTTCTTCATTTCTTGACCTATTGAGATTGTTCCACAAATTACATTCAACATATTGAAAATGTATTTTGAGTCACACCCACCTGTTCGTGTACGTTTAATTCGAGGTTTGTTCATGCCTGCAGGAGAAAACCTTTGGGAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAATTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTAATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTGGTATGTGTTTGAGAACTTTTTTTTAAAGCTTGTTTCGAGTAATATTACCGTCTCATCATAACGTCATTGACTAACGCATCATGCCTGTGGATTTTAGCAAAAAATGGTTACTATGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTGCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGTAATGGTCGTTTCCTTCATGCCTTTACGTAACTATTCTTAAATTCTTAAATCATAGAAAGAATGGAAGAAGGACTCTTACCATGCCATGAGTGTTGTTCTTCATGTGTACCTAGATTTTTGTTTCGTGGCATCATGCATTGGCGTTAAAAATCGGTTCTACTTGACTAAGCCCCGTGCTCGTCTAAGGAGGGAGTTGCTTATTGTGCCAAAATTTGAATTCTTTTCATTTTTCTTATCAACTTTCCTTCCTAAATCAGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGAGGCAAGGATTACCAGCCTTCAGAATCTGAATGTTTTCTTACAGTCAGAGAGTCATTTGATGATGTTGATGGCAATACGAATTGTGTCGACAATGACGACGACAATGAAAATTTTGACGATGAATGCTCCGATGCGGGCTTTCAATCTGGTAATAACGAGTAGTCCCTTGGTTGCTTCACATCTATGCGAATCATTGTACCAAAACATCATGATCTTTTGAGCTTGTGATTTTGTTTTCAAGGCTACATATTAATATTGCAGCTGCAAAGCAAAATCCCAAAGACTGATGATTCAAATGCACTATGCTGTAGATTGACCCATATTGTTTGTTCATATCATTTATTTCCTCATTCTTCTGTTCTCCCATGAAGAAGGGAGTCAAAATTCTGCAGGGCGTTCTTTTTTCGGGTTCAACAATACCGTAGAGCATAGAGGTTTGAACTTCTAACTTTCTTTTTGACAATGGTGTATACTTTAGCTAGCGGAACTATGTTCATGTTGAGTTGTTCTACGCCTATATTGGCTTATCAAATTTTTGTTATCGCAACCCACGAGTCTCAACTTCCCTCTAACGACTAAT

mRNA sequence

GACCGCGAATTTCATATTACTGTAAAGTCTAAACCGATTTCGCCGATAAACCCTAAACCATTTCCGGTCGCGCGACATTGTTCATCCATGCGCAATCTACCTCATGTTCGTTATCAGACTCTTCCGTCAGAATCCAATTCCGTTTGCTCATCCTCCTACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCTCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCGCGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTTGATTTCCAGTACAGTTACACGGAGACTAGCCTCTCGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGTGAGCTCTCTAGAGAGCACGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGGGAGCCACTGACAGGAGCCGAGAGAAAGACTTTGGTGGAAACTTGTCAAAAGAAGAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCTGAGGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGAGAAAACCTTTGGGAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAATTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTAATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTGCAAAAAATGGTTACTATGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTGCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGAGGCAAGGATTACCAGCCTTCAGAATCTGAATGTTTTCTTACAGTCAGAGAGTCATTTGATGATGTTGATGGCAATACGAATTGTGTCGACAATGACGACGACAATGAAAATTTTGACGATGAATGCTCCGATGCGGGCTTTCAATCTGGTAATAACGAGTAGTCCCTTGGTTGCTTCACATCTATGCGAATCATTGTACCAAAACATCATGATCTTTTGAGCTTGTGATTTTGTTTTCAAGGCTACATATTAATATTGCAGCTGCAAAGCAAAATCCCAAAGACTGATGATTCAAATGCACTATGCTGTAGATTGACCCATATTGTTTGTTCATATCATTTATTTCCTCATTCTTCTGTTCTCCCATGAAGAAGGGAGTCAAAATTCTGCAGGGCGTTCTTTTTTCGGGTTCAACAATACCGTAGAGCATAGAGGTTTGAACTTCTAACTTTCTTTTTGACAATGGTGTATACTTTAGCTAGCGGAACTATGTTCATGTTGAGTTGTTCTACGCCTATATTGGCTTATCAAATTTTTGTTATCGCAACCCACGAGTCTCAACTTCCCTCTAACGACTAAT

Coding sequence (CDS)

ATGTTCGTTATCAGACTCTTCCGTCAGAATCCAATTCCGTTTGCTCATCCTCCTACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCTCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCGCGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTTGATTTCCAGTACAGTTACACGGAGACTAGCCTCTCGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGACCCGAAGGTGAGCTCTCTAGAGAGCACGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGGGAGCCACTGACAGGAGCCGAGAGAAAGACTTTGGTGGAAACTTGTCAAAAGAAGAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCTGAGGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGAGAAAACCTTTGGGAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAATTATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTAATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTGCAAAAAATGGTTACTATGGTAGTTTGGTACCCATGGTTCGAGATGCTTTTCTCTGCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGAGGCAAGGATTACCAGCCTTCAGAATCTGAATGTTTTCTTACAGTCAGAGAGTCATTTGATGATGTTGATGGCAATACGAATTGTGTCGACAATGACGACGACAATGAAAATTTTGACGATGAATGCTCCGATGCGGGCTTTCAATCTGGTAATAACGAGTAG

Protein sequence

MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE
Homology
[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy Swiss-Prot
Match: Q8VYD9 (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 3.6e-150
Identity = 273/407 (67.08%), Postives = 316/407 (77.64%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFA------HPPTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R NP  F       H  T S+     S+LRD Y F+SPP LS    + P    
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSSSASENPDFNQ 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGP 120
           K    K  KP+Y+PPSSL+    K  HSDLPFDF++SYTE+  +VRPIGLREPK+SPFGP
Sbjct: 61  KNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQK 180
            RLDR+WTGVCAPAV+PKV S++  EDPKLEEKRR + E IQG  LT AERK LVE CQ+
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE+KTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLA 300
            +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSI+ETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

Query: 301 VPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360
           VPALT+LAKNGYYGSLVPMVRDAFL  ELVRIDC GLE+ DYKKIG KLRDLVPCILVTF
Sbjct: 301 VPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTF 360

Query: 361 EKEQIVVWRGKDYQPSESE---CFLTVRESFDDVDGNTNCVDNDDDN 396
           +KEQ+V+WRGKDY+P + +        RES  D D + +C     D+
Sbjct: 361 DKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVDLSCSRGAQDS 400

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy Swiss-Prot
Match: Q6Z4U2 (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.3e-131
Identity = 248/400 (62.00%), Postives = 294/400 (73.50%), Query Frame = 0 

Query: 15  AHPP-TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLAD 74
           A PP  PS R    S L D Y F  P SL+P     +   ++ +P KP Y+PPSSLD   
Sbjct: 11  ARPPRRPSVRRL--SGLLDRYGFVPPASLTPHSASDDGGAKKRRPKKPPYRPPSSLDRGG 70

Query: 75  KKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVDPKVSSL 134
           +    SDLPFDF++SYTE+S   +PIGLREPK+SPFGPGRLDR WTG+CAPAVD  +   
Sbjct: 71  RPAARSDLPFDFRFSYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLRDA 130

Query: 135 ESTEDP------KLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINLGRDGLTH 194
            + +DP      +LEE RR   E + GEPLT AER  LV  CQK +TK+QINLGRDGLTH
Sbjct: 131 HA-DDPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTH 190

Query: 195 NMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYN 254
           NMLNDI+NHWK+ EAVR+KCLGVPTVDM+NVC QLE+KT G IIHRHGG L+LYRGR+YN
Sbjct: 191 NMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYN 250

Query: 255 PKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSL 314
           PKKRP IPLMLW+P EP+YPRLIKTTI+GL++ ETKEMRKKGL VP LT+LAKNGYY SL
Sbjct: 251 PKKRPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASL 310

Query: 315 VPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDY--- 374
           VPMVRDAFL  ELVRID +GL KSDY+KIG KLRDLVPCI+V+F+KEQI+VWRGKDY   
Sbjct: 311 VPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDYNGT 370

Query: 375 -QPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECS 404
            Q +  +  ++V E       + N       ++   DECS
Sbjct: 371 IQDNTQKTSVSVLEEESAGAESENGDQEQASSDWASDECS 407

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy Swiss-Prot
Match: Q9FFU1 (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.9e-92
Identity = 177/334 (52.99%), Postives = 225/334 (67.37%), Query Frame = 0 

Query: 32  DHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLAD--KKPKHSDLPFDFQYSY 91
           D Y     P   P  PP E K ++ K      K   S +L +  K P  SDLPFDF+YSY
Sbjct: 32  DDYDPPFSPLSKPTKPPKEKKKQKTK------KQDQSSELVNDLKIPVISDLPFDFRYSY 91

Query: 92  TETSLSVRPIGLREPK-FSPFGPGRLDRKWTGVCAPAVDPKVSSLESTEDPKLEEKRRVM 151
           +ET+  + PIG REPK FSPFGPGRLDRKWTG  A      ++S E  +   +EE+ RV+
Sbjct: 92  SETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTA------LASPEIDQSQWVEERARVL 151

Query: 152 WENIQGEPLTGAERKTLVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCL 211
                GE LT  E   L+E  +     RQINLG+ G+THNM++DI+NHWK AEAVRIKCL
Sbjct: 152 -----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCL 211

Query: 212 GVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 271
           GVPT+DM N+C  LEEK+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPR
Sbjct: 212 GVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPR 271

Query: 272 LIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGL 331
           L+K   DGL   ETKEMR +GL  PAL +L +NG Y ++V  VR+ F   E+VR+DC  +
Sbjct: 272 LVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHV 331

Query: 332 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 363
             SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 332 GMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy Swiss-Prot
Match: Q0J7J7 (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 325.5 bits (833), Expect = 8.8e-88
Identity = 168/331 (50.76%), Postives = 215/331 (64.95%), Query Frame = 0 

Query: 38  SPPSLSPKPPPP-----ELKPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTET 97
           +PP   P   PP     E  PR     K + +      +   +P  SDLPFDF+YSY+ET
Sbjct: 31  APPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDFRYSYSET 90

Query: 98  SLSVRPIGLREP-KFSPFGPGRLDRKWTGVCAPAVDPKVSSLESTEDPKLEEKRRVMWEN 157
             + RPIG REP +FSPFGPGRLDR W GV A A   + +   +T             E 
Sbjct: 91  DPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGAGAAATSR-----------EE 150

Query: 158 IQGEPLTGAERKTLVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVP 217
           + GEPL   E   LVE  +     RQINLG+ G+THNM++DI+NHWK AEAVRIKCLGVP
Sbjct: 151 VLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVP 210

Query: 218 TVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIK 277
           T+DM N+C  LE+KT GK+I+R+   L+LYRGRNY+PK+RP IPLMLW+P  PIYPRL++
Sbjct: 211 TLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPIYPRLVQ 270

Query: 278 TTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKS 337
              DGL+  +TKE+R  GL    L +L +NG Y ++V  VR+AF   E+VR+DC  +  S
Sbjct: 271 NVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSS 330

Query: 338 DYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 363
           D KKIG KLRDLVPC+ + F+ EQI++WRGK
Sbjct: 331 DCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy Swiss-Prot
Match: Q5VMQ5 (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0495900 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.0e-80
Identity = 153/309 (49.51%), Postives = 196/309 (63.43%), Query Frame = 0 

Query: 82  PFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG-----------------VCAP 141
           PF+FQYSYTET    RP+ LRE  F PFGP    R WTG                 +  P
Sbjct: 91  PFEFQYSYTETP-RARPVALREAPFLPFGPEVTPRPWTGRKPLPKSRKELPEFDSFMLPP 150

Query: 142 AVDPKVSSLEST------EDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQI 201
                V  ++S        +P+ +   R   E + GEPLT  E   LV+     KTKRQ+
Sbjct: 151 PGKKGVKPVQSPGPFLAGTEPRYQAASR---EEVLGEPLTKEEVDELVKA--TLKTKRQL 210

Query: 202 NLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFL 261
           N+GRDGLTHNML +I++HWK     +IKC GV TVDM NVC QLEEK  GK+IH  GG +
Sbjct: 211 NIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVI 270

Query: 262 VLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRL 321
            L+RGRNYN + RP  PLMLW+P  P+YPRL+K   DGL+ +E ++MRK+G  +P + +L
Sbjct: 271 FLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKL 330

Query: 322 AKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVV 368
            KNG Y +LV  VR+AF  C+LVR+DC GL KSD +KIG KL+DLVPC L++FE E I++
Sbjct: 331 GKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILM 390

[Close]
BLAST of Cp4.1LG03g16890 vs. NCBI nr
Match: XP_023526250.1 (CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 854 bits (2206), Expect = 5.11e-313
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413
           GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413

[Close]
BLAST of Cp4.1LG03g16890 vs. NCBI nr
Match: XP_022924354.1 (CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 844 bits (2180), Expect = 4.71e-309
Identity = 408/413 (98.79%), Postives = 411/413 (99.52%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGRNYNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413
           GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDN+NFDDECSD+GFQSGNNE
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNQNFDDECSDSGFQSGNNE 413

[Close]
BLAST of Cp4.1LG03g16890 vs. NCBI nr
Match: KAG7018963.1 (CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 826 bits (2134), Expect = 4.17e-302
Identity = 400/413 (96.85%), Postives = 406/413 (98.31%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAV+PKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERK LVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413
           GKDY+PSESECFLTVRESFDDVDGNTNCVDN    ENFDDECSDAGFQSGN+E
Sbjct: 361 GKDYRPSESECFLTVRESFDDVDGNTNCVDN----ENFDDECSDAGFQSGNSE 409

[Close]
BLAST of Cp4.1LG03g16890 vs. NCBI nr
Match: KAG6582581.1 (CRS2-associated factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 825 bits (2130), Expect = 1.70e-301
Identity = 399/413 (96.61%), Postives = 406/413 (98.31%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAV+PKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERK LVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDI+NHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIFNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413
           GKDY+PSESECFLTVRESFDDVDGNTNCVDN    ENFDDECSDAGFQSGN+E
Sbjct: 361 GKDYRPSESECFLTVRESFDDVDGNTNCVDN----ENFDDECSDAGFQSGNSE 409

[Close]
BLAST of Cp4.1LG03g16890 vs. NCBI nr
Match: XP_022980305.1 (CRS2-associated factor 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 804 bits (2077), Expect = 2.97e-293
Identity = 391/411 (95.13%), Postives = 398/411 (96.84%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAVDPK SSLES EDPKLEEKRRVMWENIQGEPLTGAERK LVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDD--NENFDDECSDAGFQS 409
           GKDYQPSESECFL+VRESFDD DGNT CVD+DDD  +ENFD+ C DAGFQS
Sbjct: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQS 411

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy TrEMBL
Match: A0A6J1E8W9 (CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431873 PE=4 SV=1)

HSP 1 Score: 844 bits (2180), Expect = 2.28e-309
Identity = 408/413 (98.79%), Postives = 411/413 (99.52%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGRNYNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413
           GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDN+NFDDECSD+GFQSGNNE
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNQNFDDECSDSGFQSGNNE 413

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy TrEMBL
Match: A0A6J1IVX0 (CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479719 PE=4 SV=1)

HSP 1 Score: 804 bits (2077), Expect = 1.44e-293
Identity = 391/411 (95.13%), Postives = 398/411 (96.84%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAVDPK SSLES EDPKLEEKRRVMWENIQGEPLTGAERK LVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDD--NENFDDECSDAGFQS 409
           GKDYQPSESECFL+VRESFDD DGNT CVD+DDD  +ENFD+ C DAGFQS
Sbjct: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDDDEDDENFDNNCCDAGFQS 411

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy TrEMBL
Match: A0A6J1D1H4 (CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016410 PE=4 SV=1)

HSP 1 Score: 722 bits (1863), Expect = 4.32e-261
Identity = 358/407 (87.96%), Postives = 371/407 (91.15%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRL RQ PI FA P T  NRCFCYSKLRDHYAFESPPSLSPKPP PE KPR NKP K
Sbjct: 1   MFVIRLLRQKPILFAPPLTSFNRCFCYSKLRDHYAFESPPSLSPKPPAPEPKPRPNKPPK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
            RYKPPSSLDLADKKP+HSDLPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKW+G
Sbjct: 61  QRYKPPSSLDLADKKPRHSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWSG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAVDPK SS+E  EDPKLEEKRR M ENIQGEPLTGAERK LVE CQKKKTKRQINL
Sbjct: 121 VCAPAVDPKASSVEGMEDPKLEEKRRFMRENIQGEPLTGAERKALVEKCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGRNY  KKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI ETKEMRKKGLAVPALT+LAK
Sbjct: 241 YRGRNYITKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTKLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYQPSESECFLTVRESFDD--VDGNTNCVDNDDDNENFDDECSDA 405
           G DY+P +S CFLTVR SFDD   +GNTN V  DDD+++FDD+ SD 
Sbjct: 361 GNDYKPLDSGCFLTVRGSFDDDEANGNTNRVGEDDDDDDFDDDYSDG 407

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy TrEMBL
Match: A0A6J1EES7 (CRS2-associated factor 1, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431873 PE=4 SV=1)

HSP 1 Score: 705 bits (1820), Expect = 1.81e-255
Identity = 339/348 (97.41%), Postives = 343/348 (98.56%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180
           VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGRNYNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCIL 348
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLR +V  ++
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRVMVVSLM 348

[Close]
BLAST of Cp4.1LG03g16890 vs. ExPASy TrEMBL
Match: A0A5D3D3D7 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004260 PE=4 SV=1)

HSP 1 Score: 664 bits (1712), Expect = 2.21e-238
Identity = 330/391 (84.40%), Postives = 351/391 (89.77%), Query Frame = 0 

Query: 1   MFVIR-LFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60
           MFVIR + R+  IP  H  T  N C  YSKLR+ YAFE P S+SP PP  E KPR NKP 
Sbjct: 1   MFVIRTISREKSIPRPH--TSFNPCSFYSKLRELYAFEFPSSVSPSPP--EPKPRSNKPP 60

Query: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWT 120
           KPRYKPPSSLDL DKKP+ S+LPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  KPRYKPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120

Query: 121 GVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQIN 180
           GVCAPAVDPK +S+E  EDP+LEEKRRVM EN+QGEPLTGAERK LVE CQK KTKRQIN
Sbjct: 121 GVCAPAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQIN 180

Query: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLV 240
           LGRDGLTHNMLNDI+NHWKH EAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGG LV
Sbjct: 181 LGRDGLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGLLV 240

Query: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLA 300
           LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSI+ETKEMRKKGLAVPALT+LA
Sbjct: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLA 300

Query: 301 KNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVW 360
           KNGYYGSLVPMVRDAFL CELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTF+KEQIVVW
Sbjct: 301 KNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVW 360

Query: 361 RGKDYQPSESECFLTVRESFDDVDGNTNCVD 390
           RGKDYQP +   +LTVRE+FDDVDGNT CVD
Sbjct: 361 RGKDYQPLDIG-YLTVRETFDDVDGNTGCVD 386

[Close]
BLAST of Cp4.1LG03g16890 vs. TAIR 10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 532.7 bits (1371), Expect = 2.6e-151
Identity = 273/407 (67.08%), Postives = 316/407 (77.64%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFA------HPPTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R NP  F       H  T S+     S+LRD Y F+SPP LS    + P    
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSSSASENPDFNQ 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGP 120
           K    K  KP+Y+PPSSL+    K  HSDLPFDF++SYTE+  +VRPIGLREPK+SPFGP
Sbjct: 61  KNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQK 180
            RLDR+WTGVCAPAV+PKV S++  EDPKLEEKRR + E IQG  LT AERK LVE CQ+
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE+KTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLA 300
            +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSI+ETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

Query: 301 VPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360
           VPALT+LAKNGYYGSLVPMVRDAFL  ELVRIDC GLE+ DYKKIG KLRDLVPCILVTF
Sbjct: 301 VPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTF 360

Query: 361 EKEQIVVWRGKDYQPSESE---CFLTVRESFDDVDGNTNCVDNDDDN 396
           +KEQ+V+WRGKDY+P + +        RES  D D + +C     D+
Sbjct: 361 DKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVDLSCSRGAQDS 400

[Close]
BLAST of Cp4.1LG03g16890 vs. TAIR 10
Match: AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 407.9 bits (1047), Expect = 9.6e-114
Identity = 208/307 (67.75%), Postives = 241/307 (78.50%), Query Frame = 0 

Query: 1   MFVIRLFRQNPIPFA------HPPTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R NP  F       H  T S+     S+LRD Y F+SPP LS    + P    
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSSSASENPDFNQ 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGP 120
           K    K  KP+Y+PPSSL+    K  HSDLPFDF++SYTE+  +VRPIGLREPK+SPFGP
Sbjct: 61  KNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQK 180
            RLDR+WTGVCAPAV+PKV S++  EDPKLEEKRR + E IQG  LT AERK LVE CQ+
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LE+KTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLA 299
            +H G LVLYRGRNY+PKKRP IPLMLW+PHEP+YPRLIKTTIDGLSI+ETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

[Close]
BLAST of Cp4.1LG03g16890 vs. TAIR 10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 339.3 bits (869), Expect = 4.2e-93
Identity = 177/334 (52.99%), Postives = 225/334 (67.37%), Query Frame = 0 

Query: 32  DHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLAD--KKPKHSDLPFDFQYSY 91
           D Y     P   P  PP E K ++ K      K   S +L +  K P  SDLPFDF+YSY
Sbjct: 32  DDYDPPFSPLSKPTKPPKEKKKQKTK------KQDQSSELVNDLKIPVISDLPFDFRYSY 91

Query: 92  TETSLSVRPIGLREPK-FSPFGPGRLDRKWTGVCAPAVDPKVSSLESTEDPKLEEKRRVM 151
           +ET+  + PIG REPK FSPFGPGRLDRKWTG  A      ++S E  +   +EE+ RV+
Sbjct: 92  SETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTA------LASPEIDQSQWVEERARVL 151

Query: 152 WENIQGEPLTGAERKTLVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCL 211
                GE LT  E   L+E  +     RQINLG+ G+THNM++DI+NHWK AEAVRIKCL
Sbjct: 152 -----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCL 211

Query: 212 GVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 271
           GVPT+DM N+C  LEEK+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPR
Sbjct: 212 GVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPR 271

Query: 272 LIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGL 331
           L+K   DGL   ETKEMR +GL  PAL +L +NG Y ++V  VR+ F   E+VR+DC  +
Sbjct: 272 LVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHV 331

Query: 332 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 363
             SD K+IG KL+++VPC+ + F+ EQI++WRGK
Sbjct: 332 GMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]
BLAST of Cp4.1LG03g16890 vs. TAIR 10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 296.6 bits (758), Expect = 3.1e-80
Identity = 167/364 (45.88%), Postives = 222/364 (60.99%), Query Frame = 0 

Query: 40  PSLSPKPPPPELKPRQNK----PLKPRYKP--PSSLDLADKKPK-----------HSDLP 99
           PSL      P  + + +K    P +P+ KP  P S    D KP+            +  P
Sbjct: 91  PSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAP 150

Query: 100 FDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG-VCAPAVDPKVSSLESTEDPKL 159
           F+F+YSYTET   V+P+ LREP ++PFGP  + R WTG    P         +S   P +
Sbjct: 151 FEFKYSYTETP-KVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPV 210

Query: 160 EEK----------------RRVMW--ENIQGEPLTGAERKTLVETCQKKKTKRQINLGRD 219
            +K                 R ++  E I GEPLT  E + LV +C   KT RQ+N+GRD
Sbjct: 211 GKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSC--LKTTRQLNMGRD 270

Query: 220 GLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVLYRG 279
           GLTHNMLN+I++ WK     +IKC GV TVDM NVC QLEEK  GK+I+R GG L L+RG
Sbjct: 271 GLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRG 330

Query: 280 RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGY 339
           RNYN + RP  PLMLW+P  P+YPRLI+   +GL+  E   MR+KG  +  + +L KNG 
Sbjct: 331 RNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGV 390

Query: 340 YGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKD 368
           Y  LV  V++AF  CELVRIDCQG++ SD++KIG KL+DLVPC+LV+FE EQI++WRG++
Sbjct: 391 YCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGRE 450

[Close]
BLAST of Cp4.1LG03g16890 vs. TAIR 10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-74
Identity = 158/381 (41.47%), Postives = 220/381 (57.74%), Query Frame = 0 

Query: 11  PIPFAHPPTPSNRCFCYSKLRDHYAFESP--PSLSPKPPPPELKPRQNKPLKP---RYKP 70
           PIP  + P+  NR    ++  +H    +P  P  +P    P  + R  KP+K        
Sbjct: 37  PIP-KYAPSNRNR----NQKTNHQTDTNPKKPQSNPALKLPHHRTRYYKPVKEGVISSDG 96

Query: 71  PSSLDLADKKPKHS--DLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCA 130
             ++ + D    +     PF+FQ+SY+ET   V+P+G+REP F PF P  + R WTG   
Sbjct: 97  DRTILIGDSGVSYQLPGAPFEFQFSYSETP-KVKPVGIREPAFMPFAPPTMPRPWTGKAP 156

Query: 131 PAVDPKVSSLESTEDPKLEEKRRVMW-------------------ENIQGEPLTGAERKT 190
                K   L  + +P    K  V +                   E + GEPL   E+  
Sbjct: 157 LKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGM 216

Query: 191 LVETCQKKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEE 250
           L++        RQ+NLGRDG THNML  I++HWK     +++C GVPTVDM NVC  LEE
Sbjct: 217 LIK--PHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEE 276

Query: 251 KTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKE 310
           KT G+IIHR GG + L+RGRNYN + RP  PLMLW+P  P+YP+LI+   +GL+  E  E
Sbjct: 277 KTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHE 336

Query: 311 MRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLV 366
            R KG ++  + +L+KNG Y SLV  VRDAF    LV++DC GLE SDYKKIG KL++LV
Sbjct: 337 FRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELV 396

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g16890 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VYD93.6e-15067.08CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g3... [more]
Q6Z4U21.3e-13162.00CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947... [more]
Q9FFU15.9e-9252.99CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g5... [more]
Q0J7J78.8e-8850.76CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947... [more]
Q5VMQ53.0e-8049.51CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947... [more]
BLAST of Cp4.1LG03g16890 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526250.15.11e-313100.00CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo][more]
XP_022924354.14.71e-30998.79CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata][more]
KAG7018963.14.17e-30296.85CRS2-associated factor 1, mitochondrial [Cucurbita argyrosperma subsp. argyrospe... [more]
KAG6582581.11.70e-30196.61CRS2-associated factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. ... [more]
XP_022980305.12.97e-29395.13CRS2-associated factor 1, mitochondrial [Cucurbita maxima][more]
BLAST of Cp4.1LG03g16890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E8W92.28e-30998.79CRS2-associated factor 1, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662... [more]
A0A6J1IVX01.44e-29395.13CRS2-associated factor 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479... [more]
A0A6J1D1H44.32e-26187.96CRS2-associated factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1EES71.81e-25597.41CRS2-associated factor 1, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662... [more]
A0A5D3D3D72.21e-23884.40CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
BLAST of Cp4.1LG03g16890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G31010.12.6e-15167.08RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT4G31010.29.6e-11467.75RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT5G54890.14.2e-9352.99RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT2G20020.13.1e-8045.88RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
AT1G23400.13.3e-7441.47RNA-binding CRS1 / YhbY (CRM) domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 277..360
e-value: 2.5E-9
score: 47.0
coord: 157..242
e-value: 1.1E-18
score: 78.1
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 280..360
e-value: 1.5E-8
score: 34.7
coord: 157..242
e-value: 7.3E-20
score: 70.9
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 155..253
score: 19.06831
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 275..371
score: 16.632799
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 277..371
e-value: 8.7E-12
score: 46.9
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 156..253
e-value: 5.1E-23
score: 83.0
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 277..366
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 156..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..413
NoneNo IPR availablePANTHERPTHR46247:SF2CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIALcoord: 25..396
IPR044599CRS2-associated factor, plantPANTHERPTHR46247CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTICcoord: 25..396

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16890.1Cp4.1LG03g16890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000373 Group II intron splicing
biological_process GO:0006397 mRNA processing
molecular_function GO:0003723 RNA binding