Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCGCTGTTCAAGATATTCCTTGTTTTGTTACCCCTAAAGCCCGAACGGAGCAAGGTTCCAGTTAAAACGGTAATCAATTGGAGCACCTCAGCAAGCCTCGCCAGGCCCTGAGAGAGATCTGCAATCGCTGTTCTCGTCGCGTGCCATTGTCAACAGGGCTACTGTTGTCTCTCGCTAATGGCGACCATGGATGGAGTGGCGCAGAATCAGCCTCAGCAGCAACAGCCTCTCCTGGCGCCGCAGGTGGTTGTCGCAGAAAGGCTAAACCAGGCGGTACAGCAACAGTTGAACCTGGAGGCTGTGAAGACTCGAGCTACTACTCTATTTAAAGCCATCTCTCGGATCCTCGAAGATTTTGATGTCTACGGTCGCACCAATACGACACCTAAATGGTCCACTCTCATCTTTCGCATCGTTTTTTCTTGTGATATTTTCCAAATATGCTTGAATTTTTAAGTTCCTGATTGGCTTTCGATTGATAAAAAACTGAAGTTATGTTGTTTAAACGTTGAGAATCGTTGTGTTATTTCTGCCGGGGGTAAAAGACAATCTGATGTGGGGAGGGGAAGGACTCGAGCATGTAGTTTCTTTTATTTCGCTTCATCTACACTTCCTAATAGCTCGTTGATGTTAGAAAGTAAATCATTTTTCCTATCTTCTGGACTTACATGTACTAATTATTTTTCTAAACATCAAAGCATCGTAATCTCTCTCTCTCTCTCTATATATTCAATTTTCTCCAAATCTGGCTAAATGTGTAGTTGATTTCTACACCAGGCAAGACATATTGGGGCAATATTCTATGGTGAATCTCGAGCTTTTCAACATCGTTGACGAAATTAAGAAAGTTTCCAAGGCTTTTGTTGTACATCCCAAGAATGTTAATGCAGAGAATTCTACAAGTATGCACCTGCATCCCTTCCAAGTACTTGGTAGCATGGAGTAAAAGGAAATATGACAATTTCTGTTTTGTGTGCTTGAAATTACTTCTTAAAGACATCGAGATAATGTTTGCTTGTTTATTTTGAACTTCTGCCTTGAGAGAATGCATTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCTGTATGAGATTACAAAAGAGGGGAAAAACCCGAATCCAAGAGAGTTACATAAAGTCTCTCCAAATGAATAAAAGAAAGAAAAAAGGGGTAGTGATGGAAAAAGAGGGAGCACTTATACCAAGTAGTAGCCAAATAAACCATAGTATCAAAGTTCATATAAAACAATCCAATCAAAAGGAAGTTCCTTGTCTTTTAGGACTTCTTTGCGAAGAACTTCAAAAGAATGCCCTGACAAAGTTCACCTAAAGGAGCTTCTCTTCTATTTTAAAAGGATGTCCACAAATAGCCAATTCGAGCCTAGCTTAATGGAATACCAATTACCATACCAGAGGTTGATGGTTTGATCCCCCATCCCACGATTGTTGAACTCAAAAAGGATGTTTGATAAGAGTAATAGAGAGGCTAAGAGTAAGACCATTAGGGGGAGTCGTAGACTATCCAGATGTTGAAAGAAAAAGTTTGTGCATATTCACATGAAAAAAAAAACGTGGCTCTGAAATTTGGAGTTATTCTTGCAAATAGGGCACCAACGAGGAGATATACTTATATAAGATATTCTACATGGAAGTTTAGCATGTGTGTACCGCCTTGTGGCTAATCTCTTAGAGTAAGAATTTCACCTTCTTAAAGTAGTGGTCTTTCCAAATGGTATAATATAAGTGGGGGATAGACGGTGTATTGTGAGAGATCAGCAAGAGAGGGTTTGCAGTGAAAGTAACATTTGGTTACAGCTTTGAAGATTCTTGTCCAAGACTTGGATAGCTGAGATGAGGACAGGTGGTGCAAAGAATGTACCATTCCTTAGCTTCATTCAACATCCTTTAAGTTCATTATTTGCCTAAGATTCTAACCTTTTGATTCAGTCCTCCTCATATCTCTTTTTTGATAAGGTCATTCACATATCTTTGACAACAATTTTCTTTTTCAAAGAAATATCATATAGTAAAAAGGAAGTTACGTGCCAATATGTCATCCATTAGCAAAACATCACTCCAGAATGAAGTATTAGCCACATCTTCAGTCTTGGAAGTCATCCGAGCATGAATCAGATTATGGTGCTTTAAGATGGCTTTCCATGGTCCCTTGGCAAAGGATAAATATAGAGGTTCCATAAGATTTTTTGTTCTCAAGAGTAGAGCAGTATTTGGCATCAACGACCTTCCTGGGCCAATTTTCTCCTTGATATCTCCAAATCCATTTGCCAGTAAAGCCTCGCTCTTGCTCTTGCTCATAAGGCTATGTAATCCTAGCCTCTCGTTCTCCATGGGGATAATATTTTCTCATTTTATAAGATGTATACCCATTTTATCACAATTTCCTTTTCAAAGATTTAAAAAAAAAAAGCTCTCTAAGGATTGAATCACCTCGAAAGGCATGACATATTGACAACAGGAGATTTAATAGTGTGGCATAGAGTGAGTCTCCCTCCCTTATGATCTCAAAAGGAGCAAGAGTGGTGCTTGCCATTGAGAGGAAGGCCAAGGTAGAGTTTTGACTGATTCGAGAGACCCTTGTTTGCTAGACATTCCACATTTTGATTTTCCATATGTAGACCCAAAATTTTGGATTTTGGTGATTCACATTGTGCGTGGATGCTTCCTCAAAAAGACTAACAATGTTAAAAAAATTAGATAAAGCATGCTCATCCTTTTATGGAGAAAATGATGGCATCATCGTCTGACTGTAGATGATGTATATCATTACAGTTCTTACCTAGGTCGAAACCTTTACTCAAATTCCTATTTGTTGGATGTATCATAATTCTACTGAAGCAATCAACAGTAATAATGAAAAGGAAAGACGAGGGAAGGTCACCTTGATGTAGTCATCTAGAATCAAGAGTCTTGCCTTTAGTCTAACTGTTAATGATGATGGAGAAGTTTGTTGATGAGATGCACCCTCTAATCCACTTTCTCCATCTTTGCTTGAAGCCTTTAGCCACAAGTATTTTATCTAGGAAACCCTAATCAACTTTGTTAACAGGCTCACTCAATTCCTAGTTTCATGGAAATTCCCTTCTTTTTTTTCGTTCATCGATGAGCTCGTTTGCTATAAGGAAGACATTGAGCATTTGCCTACCTGCAACACATGCAAATTGAAATTCTGTGATGGTGTGGAGAATACATTTTTTAGCCTTCCTGATAATATCAAACGCCAATATATATATATATATATATATATATATATATATATAGAAGAACAAATTGCATAAGAATAATTAGATCAATCGAGAAGGCAATTCAATCAAGAAGCGGCCCATCAAGCCACTGACTAAAAGAAAATCTCTAACGTATAATATCCTTGCAATAAGCTTGTACATACATGATATGAGAGTGATGAGCCAAAAATCTTCAACGGACTTTGAGACTAGTAACGATGATACCTTTCTTGAGAAACTCTTGGAACACCCTTATGATATCAAACTTAATCATGTTTCAGATCTTTTTTAGAACTTGGCTGCAAAACCATGCAATCCAGGAGATTTGTTTAATCCCAAATCCTTAACAGCTTGCCAAATTTCCTCTTCTGTGGAAACCTTTTCAGGTTCAGAATTGTGCTGTAGAGTAATTGGATCCCAATTCAAAGGGTGGGGAAGAAATCTGCAGCCTTCTTTCTTGGTATAACTTGTCAAAGCTGAATAAATCTGTTCTCAATATCTTTCTCTGACAGCAAGCTCTTACCATCTTTAGGAAGAATCTCAAGAATGGCGTTTTTCCTTCTCTTGGCAGCCACGCTTCTGTGGAAAAGACTGCTGTTTTTATCCCTTTGTTGAGCCATTTTGATTTGCATCTTTTTCTCCAAAGAGACCCGTATTTGGCTGCCAATGAAAGAAGCTGGGATTTAATAGATCTTCTTTGGGAGCTTTGGACTGTTCATGAGTTGATGTAGGCAAAGGTTTCCTTGTTCTAAGATGTGATGATGAATTTAAGCCCTTTTAATATCTGTATGCAACGGTGGCCTGACCAGCCCCTCAATCGAGTATTGATCCTCCAATTTTCAACCATTGGGGGAAGCTTTGATGGAGCATCCACATGTTCTAATTATATTTGTTTAATAGATCTTCTTTCTGTTAACGTGCTTTCATTAAATGTTATCTTATTTTTATTTTTGAAATATACCCAAAATTAAAGCCTTTACTCTCTGGAAGTACTATTTATTTCTATATGATCACCACCATCATCCTTTGTTTTTGAGATTGTTTTTTTTTTTTCTCTTTCTTTCTCTTTTCTTAAAACCTGCCAGGCACATATTTCAAGATTTTTTTCCCTATTTATAAAACATAAAACCATTTTTAAAATCAAAGAAAATATTTATATATAGTAGACTGTGTGTATGTAAATAGGCCACAAGTGATTTTTTCAATAATTGATTTTTGACTCTATCCTACGTGGTTGTGACGATATAGTTTGTTGGCTAGTTATTTGAGGCCACGTAGTGTCTTACTTGTGGCTATTAGTCACTAGACACTGCACATTAGGCGCTGTGCAGATGTAGACAAGACGATCTTTAACCATTGGAAAAGGCTTGAGTGTAATATGTCTTGTTCATACATTGAAAATGTCAATTAAAGTTGTTCAACATATTATTATTTCTTACAAGTTAAGTCATTGAAAGAAAAAAAAGTTCTTATGCAACACAAGATGATCTTTAATTGTTAGCTTTTTAAACACAGAGAGTATGTGATTTGAATCATCCTTAAATGTTTTTATATCCTTTTATGGCTAGTTTTTATTTTACTGTAAGAAGGATGATTGGGGTCCAAATGAAAAGATTCAGTTGGGTGCAAGTGTGTCTCATAACTTAGGCTCGGTCTCTAGAAGTGCATTATTGGGCTGTCCGGCCATGTTAGCCCGGTGTGCTTGCAATCTTGTCCAAGTGAAGGATTTTATAGCTTTGTAAGAAGATTTGGTGGCAAGCTATCCACCTCTACTCATGTAAATAAGCGAGGTAGACTAGTGGTTGATACTCTTGCCTTGGGTTGACAAAGTTTTGTATGATCTTCAGGATTGAATGTGCTCCCTGGCACTCAATTAGAGGCCTCCTGCCTGGGATTTGGTTTGATAACTATTTTATATTTCATGTGTGTTTGAATAAATATCAATTGTAGGGTGCTTCTATATACTGTTTTGGCTTTTGGTTGCGGCAATGGCTTGTCTTCCAAACTGATTCTATATCTGTTTTTTATCTGCAATTGCCATGTTTATTTCTCACCAGAGCAGGGAGAAGAAGCATAAGCACTCACAATTCTCATTATCTCGAAGCTTAATTTTATTAGTATAGTAAAATGAATTACTATGGAACAGTACTTAACTGTGATGTTAGCCCTTCTATTTGGGTGTCTGGTATGTCACATAACTGTAATTGCTGGAATATCTTGGAAGTTGGTGTTTCTTCACTATTGTCTGCTTATTTTACATCTTTTTCCTGGCATGGTAGACATAAATTAGTATTGCAGATGATCCCTCAACTAGTATTTCAAGAGAAGGAAGATGAGACAATAATTCATTTGTGAAATTTTGATTTCCACTAATTTTTTTCTTCTGTTTTGTGAGCCCAGTACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAGATGGAGGTAGACGATAATTCAAAACGTGACCAGTTGTTACTTGGGATGCAAAATATGCCAATATCTACACAGATTGAGAAGTTAAAGGTACTAGAAGTTCGTTAAATAACTGTAGGTTGTACAACTCCTTGAGTTCTAAAGAAAGTCCTCCGGCATTTAGGTTTACCTTTCTTACAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAGACTCGGAAAGCATATTGTTTCGGAATGCGTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTTACTCCGAGCTGCTGTTAACTTTGGGGAAGGTACTTCATTACTTTTATAGTCATTGATTGATATCTTAATTTTAATCAATTGTAGGTCATATATTGTTTAGTACTGTATGATGCCTCGTAAGTCACTAGTGATTGAGCTATTTACCAAAAAAATAATATTTATATTTAAACTTGCCAAATTGTCACATATCTATGAAAAGTACAGATTTTTATATTTATTTCTTAATTCATGATATACTTCATCAATTTGTGGTGCATAATTGAATACGGGCATTCTGATTTGTGCAGCAACCATTTCCTCTCTTATCATTTCTGTATGAATTGAAACGCAATCATAACTTGTCTTGTCGGCAGAGTTGATTTAAGTGGCAAATTTGTTTGAGATTTTGTGAAAAGAATTGCTGTGAGAGGAAGGACAAGTAGAATGTTGTTGAATGTGAGTGATGCCGCTCCTTAGAGATGGTCATTTGAATTATGGAGCATGCATATATGGCGATAGACACTTTGCTCCTAAGCTCAATCACACACCTTAGGGAAACCCGGTTGAGTTGTAGCCCCAAAACGATTGGTTTTCATACTTCCCAAACACTCTTAAATCCCCCAACTATGTCACAAGCCCACGCTACCATGCTTTGATATGGCAGGTTGGTTTAATTCTGGCAAAACAAAGGGTATGAGGTGTTAAAAAGAGAGTAATTGGTGGCCAACCCGTGGTCTTTTCTCATAAGGATGTCTTTGTTTGATGGATCTTATCCCATTAGAGTTTCTGTTTTCTTGTCTCTCTCGAAGATCATGATTTCGAAAAAGGTTGTTTTTTTTTTTTTATCTGAAAGGTTATTCATGTGCGAGTTGACACACACTTTAGAAAGTGGCCTCCATTGGTTGGCTTGCATCTGTTGCAAGTCTAAATTTGCTGTTTTTTCTTCTCATAGAGAATTACAGGTTCTTTTATAGGGAAAACTGACTAAATCTAAATTGATAGATAATCTAAATTCCCTCGATACTAGGTAATTTATATAAATTCCTAGATAAGGTAAATCTAAATAATAATCTCTAGATACTAGGTAATTAAATTTCTCTAGATACTAGGTAACTAAATTTAAATAATAATCTCTAAATACTAGGTAACTAAATTTAAATAATAATCCTTAGATACTAGGTAACTAAATGTAAATAAATCATAAATTAGGGAGGTCAATTACTCCCCTTCAAGCTGAGTAATAGATATCATTCCTTCTCAGCTTGGATACTAACTTATAAATTACACATATCTCCTAATTTAAGGCTAATCCTTCGACACCCCCTCAAAGTGATTGGATATATCTATTAGTCAACTTGGACCAGATAGGTTTATGTGCAATATTGATCGCACGACATCAACGATATGACTTCAATTATAAGGCATGACGTGAATGGTAGCTATGAAGGCACTAAATAAATTTGGTTTAGGTGGATGCTGATTAGCCATGAGGCTTCGAATAAATTTGTTAATGGTAGCTATGAAAGCTTTGAATAAATTTGCCATTGATAGTTGAAGGCTCCGAATAAATATGTCAATGGTAGCTATGAAGGCTCCGAATAAATTTGTCAATAGTAGCTATGAAGACTCTGAGTAAATTTGTCAACGGTAGCTATGAAGACTCCAAATAAATTTGTCAACGGTAGCTATGAAGGCTTCGAATAAATTTGTCAACGGTAGCTATGAAGGCTTCGAATAAATTTGTCAATGGTAGCTATGAATGCTCCGAATAAATTTGTCAATGGTAGCTACGAAGGTTACGAATAAATTTTTCAAGCTAGCTATGAAGGCTTCGAATAAATTTGTTCACGTTTGATATGAGGATTTTGAATAAATTTGTCCACGGAAGTTATGAAGGCCTTCAATAAATTTATTTTGCCAGCAAATCCGTCCGTTGAAGCCGTGAGAGCACATAACTCATGCATACTTTCCCCTTGGAGCACTTCCACGGGGTTTGCTCGTCTCTCTCGTGCTTACTCCGCTTGGAGTGTATGGTTCAATTGGTAACACTACGACAGTAGAGCTGATACTGGACTCATAATCTACGAAGTAGGTTTTCTGTAGTGACCTTTCTTAAGGTACCGTCCGATTCTTCTATTCGAGAATTGGAGTCTAGACTTGATGAATTTGGAGATCTTAGTTTTGAGGCCTCCTTTTCTTCCTCCGACACCTTTGGTTCTCTCCTTTATTGAATGCTTCAAGTCAAAATCTCAAAAATTTGATGTTTTGTGATGATGATTGGAAGAACGATTTGAGATTTTTCTGACATGATGGTGAATCTTAATCTGGGAAGAAATTTAGTCAACAAAAATGAATCAGCAGGGTAGTAACCGGTTACCTTTTTTGCACAATCTGAATAGAAATTGGTTATAGGATGACAACTATGAAGGCTCTGAATGAAACTTGATGGCAGCTTTGAAGTCTCTGAATGAAGTTTCAACGATAAATGATCGGCAGCGATGAAGGCTTCACCAATAAAGTTAGCGTTTTGGTTCTAATCAGATTTCCAGAATAGAAAGGCTCTGATACCATGTTGCAAGCCTAAATTAGATGGTTGTTTTTTCTTCTTTGTTTTTAAAGAATTACATGTCCCTTTTATATGGAAGGATTGACTAAGTTTAAATTGATAGATCATCTATCTGAAACCGTAGATACTAGGAAATATAAATAAATTCCTAGATAGGATAAATCTAAATAATAATCCCCAAGTACTAGGTAACTAAAATCTAAATAAAATCCAACTAAATAAATTGGAGAGGTCAACTGTAATGGGAATACACATATCTTTCAACAATATCCTCTCTCAAAAGGTCTGTAATGGGAATACACATATCTTTCAACAATATCCTCTCTCAACAGGTAGAGGAAGACCTTGATCATATCCTTTAGAGATGCGACTTTGCGCACTTTGTGTGGAGTTATTTTTTGCAGGCGTTCGACTTTCAGCTAACCCACCATAGAGAACTGAAATGAGATGATCGAAGAGTACATTCTCCATCCTCTTTTTAGGGAGAAGAGCTGTTCATAGTGGCTTGTCGGGTGTGTGCTTTGTTGTTGGATCTTTGGAGAGAGATGAATGATAGAGTATTTAGAGGCTTGGAAAAGGATTCAAGTGATGTTTGATTCCTCGTTGGATTTCATGTTTGGTTACAATGGTCTTTTGTCATTTTTTTCTCAATTGGAAGTTAATTTTCTCATTTAAATAAAAAAAATAAAAATAAAGTAGTCCTTGTTATGCCAATAATTTGTAACTTTATTTCTCAGTTTGCTTGCATCTCTTGTTTATGCAGGATTAAGATTACCTATTGATCAACGGCAGATTACTCCAACACTTCCGATGCATTTGGTAGATGTGTTGAATGTAGGTGATGGAGTGCAGAGTTTTAATGAAACATCTGGTAACATTCTTTTGTTTTTTTTTTTAGCATGAGTGGTTTATATATTAATTTACTAAATTGCACTAGTTTTTTGTTGTTAATTTACTAAGTTAACAAAATGTCTATCAGGTATGTATGCAAAGAATACTCCTCTAACATCACATAATATTGGTGGTCCAGGATCATTGTTACAGGTGAGATGATTTCCTTGCCCCTTGAAGCGGTTCCTCAACTCTGATTTATTTGCACCCCCTTGAATTATAGAATGTGTTCTGAGTTCTCCTAAGGCAAACAACTTTTGGCTAACAGATTTCATTTCATTCGAGGTTCCCTAGTGTATGTGATTGAATTATCTTGTGTCAGTAGTTCCCTAATTTTATTAGGATTTCTTTGGTTGTGAGTTATATCTTTCCTTCATCCTTATGAGGTTAGGTAGTATATTCGGTACTGTCAGGAATTAAAAGTTTGAAAAGTTTCTTGCTGACTCTCTCCAATTCTCGCAGTTCTTGCTTTCCCTTCTCTTCCTACGAATATTTGCATCAGTATTGACTTTGAACTTGAGCACTTGGACTGCTTTGTTTGCATATTTAGATTTAGTAATAACTCTATACTTTATATTCTGCATCATAACATCAATGGTCTCTTTATCTTACCTTCTTGTATGTCGTACACACATGCATATAATCAGAAATTTCAATTTTTTGCAATTGCTGTTGATTGTCCTTTTCATTTGATATTTAAAGCAGCCTCCTGGATCACAACTTGTTGGAAGGTCAGCTGCATCGCCTTCTGGTGCCACATCCTTTGACAACACAACGTCACCATTGCCATATGCTAACTCTCCAAGGTCAACTGCGAATGTTATGAACGTACCTTCTCCTCAACAGCAGACCCAACAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACTTCAGGTCCAGCAAAGGCAAAAATTGATGCAACTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGATGAGGCAATCTCCTATGCAAGGAATAGGACAGGTAATATGCTTGCTGGTACTAAAAGTAAATAATAACACTTGGACAATTTAATCTGTTATAATTTTCTCAATGTTTACTAGACTCATTCTTCAAGACTTAGAATGTTTAGCATCGTCCATCTTTTCCCCTGGGACCTTCTTAGTTCATGAAATCATTATAATTAGATATTAACATTTATGGTACTATTTTAGTCAGAAACTATTCCTCGACTATAATAGGAAAAAGAAATGCAGTGATGGCAATTTAATGGTCATCTTACTGGGATATCAAAAGAACCATGGCCTATTCAATTATTTTATTAGCGTATTCTTATTGATTAACATCAGATTATTTATGCATGGCTGTTGAAAAATACTTGCCTCATCCACGAATACCATCTACTGATAACTTGAGAAAGACATATTTCTAAGTGAAGTCCCATAAAAAAGATATTTTAAACTGTAGTCAGTTGTGTTGTAAATTGGGTGACCTCTCAACTCACAACACAAGGAGAGTTATCAATATAGAAGCATCTGAATATAATACTTGGAGGCACAATGCAGACTGTGCTCCTTGATTTCTCTGGGATCAGTTATATTTTATTTTATTTTATTTTATTTTGTAACCATCCCAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCATTGGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGTCACATTCAACATGGCATTACTCAAAGCCAGCTTGGCCAAGGAAATCAAATGAATCGTCACTTGAGCCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGCTGCGCAGACTACCCCAAGTTCTCAAATGGTCAGATATTTCCATCCCTCATTTTGTTAATATCTTGTGTTCCCTTTTCTTTCTTTCTTAGATGTAGTTGGATTAATATTACCATCAACAAGTAGATTGCATGAAGTAAATGTTATGCTATTCTAGGTTAATTTTCCACTTTTCCTCAAACTTATTGTTTCGAGTGGTGAAATCACTGCTACTATGTATGGTGAGAAGACAACTTTGACCCTTGCATTGTAGCTGTGTTGTGTTGCTTTTACTGCTACTACGTAAATATTTACTGCTCCTACATGAATGAGCTTATCTTTTCCTTTCTGTTCACAAGTAGCTGTGTTGCTTTACCGAAATTAAAACTGCAGCTCCTAGAGTTTCATCTCGGTTGTTCTTTTAGGCAATTTTTGTCCCTATTCTCAACTTGTCAACGTGGACAATTATTGTTGATACTTCTCTCTGGTGACGCGATGCAGTCAATTTATCCTATTACCTACTGATTTCGTTTTATTCAAATAACATTTTTCTAACATAAGACCCTAATTTTTTTTTATTTTAATTATTATAACCAAAAGATGCATTTTTTCAGATAAGAGAAAATTTCCATTCCATGAGAAAGGAAAATGTATAGAAAGACTAGAGTTGCAAAACAAATCTCCAGCTGGTCATGAAAACTGTTGGGTAATTACAACCATGATTAGACTATAGAGACTCAAAATACAAATGATACACTAAATCTTCCCAAAATGAGAATCACAAAAGAAATAATAATAATCATAATAAAGTTGCCTCATAGTTGTGAAGCAACCATTTTCTTCCTCTGCAAATGAAATCTGAAAGTAATTTGATGATAACTGAGACATGAATTCCTCAAACTTTAGTTGTAATTGTAAATCACTCATTTTTGTGACATCTGTTGTCTGCAATTATTTCACTAGCAGTTAAATCCTGATCTAGAATTTGACTTCTTCTGACACATCTTTTTGAGATTTAGAAATTCTTTTGGGCAGCACTTTGATCTGTCCATGACTAATAGAAATAGTATTGTTCAAATATGTAGCCTTGGAGATGAAGGCCTATAGGTCAAATTTGCCACGAAACTACAGCTGGGACTTGTATAATACAACAACCTGTTTTAATTTTAACACACTAAAAATTGGGGTTTCAGGTTCCACTTGTAGTTCTAAAAAACGTAAATTGACAGTTGACACCTCAATATGATACATTTTATCTTTATTTTCTTTTAATTGTCACTGAATTATTTATATCTTTTTTTTTTTTTCCAGATTCCAAATATTTCAGCTACAATGTCATCGCAACCACTCATGCCACGTGTGCAGGTTTGTTCTAATTTGCTCGTTAAACTTCTAATGTTTTTTTTCCCAAGTGCTGTTGAGGGGAAGATAGGAGGCTGGGGTGTAGGGTGTATGCAAATCTAGACGTAGTCTGTTATTATAGGGTATATTAAGCTGGAAAATACAAATGGATGTTGTTTCTTCCTCTTTGTTGTTCGGCTTTAATTTGGTATGATCTTCTGTTTTTCTCAGTCTTTCATAAAAAAACATCCTAAGCTGCTTGGGGACGACAATTACGGGAAATTATCTTTGCAGTTGGTTTATTATCACTGTATATGTTGATTGAGTTCAATAAGGTCTTCCTCTTTTGTGCAAATACTTCATGATCATTCTTTCTGGTAACCTGAGTTTCTTCATAGCAAATCCAAGTGATCAAATATTGCAGCGTATGTACACCATTTGGCCAAATGTCCAAGATTATTTAAAAGAATTTTTACGTTTCATTCATTTTAGGGTGAGATTTTAGGATTATTTCTAATTCTATTTATAAGCGCAATAATTGATAGTACAAGTAACCAATATACAGACAGATTTTCTTACTGCCATATGCTACTGATCCAATATGTACCATGTCTCCTACAAACTAGAGCAGTTCTAACATCTTTTCAGAAGCGTATTCTTTATGGCACTCTCACTATCATTTTTACATAACTCTAGTCTGTACCCCTATCATTGTTCGAATATTTTTTTCCCCTTCACTTGGCATTTAATTTGTTGTTTCAGTATGGGAGCAATCCGCAGCGAAGCCATGCTCAAATTCTGAGTGATCAGAGTATGTAGTCCCTTGGCTCACTGATGTGTTGGTTAAGGCAGATGCATAATAATAATATGGTCTGTGTGTAACATTTCTACGATATTGCTCTCTAACAATCAGCCGGTGTTTATCCCTCAGTGTTCAACATGGGAGGAGGCAGCGCGGGTGGTATGATGCCTATGCAACAGCAACAGCAACAGCAGCAGCAGCAGCTTGCCCCACAAGGTGCATTTGGTAACATGGCAACAAACGCACAGTCTCTCCAATCTGGTATGCTTCCACTTCAGAACATGCAACAGACTCACCCTAATTTCGGCCAGCAAAGACAGCAAAACCAGCAATAATGAGCACTGTGCGTTGGTAGCCCCTGCATGTAATGCAATCCATTATCTATTTACTGTGTGGTAGTAGAGGAAGATTAATTTAGTACTGTTTTGTACATACTGCTGAATTTTGGATTGTGTGTTTACTAGGGTGGGTAAACAATCTGCCCCTTCTTTGGCCCAATGACTTGTTATAAACTAGGCGTAGTTTGGAGGAGTAGAGAGTGGGGGAGTTATCAACTCCTCATGTGGGACTACCACTTTTACTCTTTCATCTCTTCTTTCCCTTCTCTTCTCCTTTTCTCTCTCTTCCATTTATTAATTTACACATGGTTATTTAGTGATTTTTTTTATAAATGAATTCTCATGATTATTAATAATTAAAGTATAGGGT
mRNA sequence
AATCGCTGTTCAAGATATTCCTTGTTTTGTTACCCCTAAAGCCCGAACGGAGCAAGGTTCCAGTTAAAACGGTAATCAATTGGAGCACCTCAGCAAGCCTCGCCAGGCCCTGAGAGAGATCTGCAATCGCTGTTCTCGTCGCGTGCCATTGTCAACAGGGCTACTGTTGTCTCTCGCTAATGGCGACCATGGATGGAGTGGCGCAGAATCAGCCTCAGCAGCAACAGCCTCTCCTGGCGCCGCAGGTGGTTGTCGCAGAAAGGCTAAACCAGGCGGTACAGCAACAGTTGAACCTGGAGGCTGTGAAGACTCGAGCTACTACTCTATTTAAAGCCATCTCTCGGATCCTCGAAGATTTTGATGTCTACGGTCGCACCAATACGACACCTAAATGGCAAGACATATTGGGGCAATATTCTATGGTGAATCTCGAGCTTTTCAACATCGTTGACGAAATTAAGAAAGTTTCCAAGGCTTTTGTTGTACATCCCAAGAATGTTAATGCAGAGAATTCTACAATACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAGATGGAGGTAGACGATAATTCAAAACGTGACCAGTTGTTACTTGGGATGCAAAATATGCCAATATCTACACAGATTGAGAAGTTAAAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAGACTCGGAAAGCATATTGTTTCGGAATGCGTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTTACTCCGAGCTGCTGTTAACTTTGGGGAAGGATTAAGATTACCTATTGATCAACGGCAGATTACTCCAACACTTCCGATGCATTTGGTAGATGTGTTGAATGTAGGTGATGGAGTGCAGAGTTTTAATGAAACATCTGGTATGTATGCAAAGAATACTCCTCTAACATCACATAATATTGGTGGTCCAGGATCATTGTTACAGCAGCCTCCTGGATCACAACTTGTTGGAAGGTCAGCTGCATCGCCTTCTGGTGCCACATCCTTTGACAACACAACGTCACCATTGCCATATGCTAACTCTCCAAGGTCAACTGCGAATGTTATGAACGTACCTTCTCCTCAACAGCAGACCCAACAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACTTCAGGTCCAGCAAAGGCAAAAATTGATGCAACTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGATGAGGCAATCTCCTATGCAAGGAATAGGACAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCATTGGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGTCACATTCAACATGGCATTACTCAAAGCCAGCTTGGCCAAGGAAATCAAATGAATCGTCACTTGAGCCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGCTGCGCAGACTACCCCAAGTTCTCAAATGATTCCAAATATTTCAGCTACAATGTCATCGCAACCACTCATGCCACGTGTGCAGTATGGGAGCAATCCGCAGCGAAGCCATGCTCAAATTCTGAGTGATCAGATGTTCAACATGGGAGGAGGCAGCGCGGGTGGTATGATGCCTATGCAACAGCAACAGCAACAGCAGCAGCAGCAGCTTGCCCCACAAGGTGCATTTGGTAACATGGCAACAAACGCACAGTCTCTCCAATCTGGTATGCTTCCACTTCAGAACATGCAACAGACTCACCCTAATTTCGGCCAGCAAAGACAGCAAAACCAGCAATAATGAGCACTGTGCGTTGGTAGCCCCTGCATGTAATGCAATCCATTATCTATTTACTGTGTGGTAGTAGAGGAAGATTAATTTAGTACTGTTTTGTACATACTGCTGAATTTTGGATTGTGTGTTTACTAGGGTGGGTAAACAATCTGCCCCTTCTTTGGCCCAATGACTTGTTATAAACTAGGCGTAGTTTGGAGGAGTAGAGAGTGGGGGAGTTATCAACTCCTCATGTGGGACTACCACTTTTACTCTTTCATCTCTTCTTTCCCTTCTCTTCTCCTTTTCTCTCTCTTCCATTTATTAATTTACACATGGTTATTTAGTGATTTTTTTTATAAATGAATTCTCATGATTATTAATAATTAAAGTATAGGGT
Coding sequence (CDS)
ATGGCGACCATGGATGGAGTGGCGCAGAATCAGCCTCAGCAGCAACAGCCTCTCCTGGCGCCGCAGGTGGTTGTCGCAGAAAGGCTAAACCAGGCGGTACAGCAACAGTTGAACCTGGAGGCTGTGAAGACTCGAGCTACTACTCTATTTAAAGCCATCTCTCGGATCCTCGAAGATTTTGATGTCTACGGTCGCACCAATACGACACCTAAATGGCAAGACATATTGGGGCAATATTCTATGGTGAATCTCGAGCTTTTCAACATCGTTGACGAAATTAAGAAAGTTTCCAAGGCTTTTGTTGTACATCCCAAGAATGTTAATGCAGAGAATTCTACAATACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAGATGGAGGTAGACGATAATTCAAAACGTGACCAGTTGTTACTTGGGATGCAAAATATGCCAATATCTACACAGATTGAGAAGTTAAAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAGACTCGGAAAGCATATTGTTTCGGAATGCGTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTTACTCCGAGCTGCTGTTAACTTTGGGGAAGGATTAAGATTACCTATTGATCAACGGCAGATTACTCCAACACTTCCGATGCATTTGGTAGATGTGTTGAATGTAGGTGATGGAGTGCAGAGTTTTAATGAAACATCTGGTATGTATGCAAAGAATACTCCTCTAACATCACATAATATTGGTGGTCCAGGATCATTGTTACAGCAGCCTCCTGGATCACAACTTGTTGGAAGGTCAGCTGCATCGCCTTCTGGTGCCACATCCTTTGACAACACAACGTCACCATTGCCATATGCTAACTCTCCAAGGTCAACTGCGAATGTTATGAACGTACCTTCTCCTCAACAGCAGACCCAACAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACTTCAGGTCCAGCAAAGGCAAAAATTGATGCAACTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGATGAGGCAATCTCCTATGCAAGGAATAGGACAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCATTGGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGTCACATTCAACATGGCATTACTCAAAGCCAGCTTGGCCAAGGAAATCAAATGAATCGTCACTTGAGCCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGCTGCGCAGACTACCCCAAGTTCTCAAATGATTCCAAATATTTCAGCTACAATGTCATCGCAACCACTCATGCCACGTGTGCAGTATGGGAGCAATCCGCAGCGAAGCCATGCTCAAATTCTGAGTGATCAGATGTTCAACATGGGAGGAGGCAGCGCGGGTGGTATGATGCCTATGCAACAGCAACAGCAACAGCAGCAGCAGCAGCTTGCCCCACAAGGTGCATTTGGTAACATGGCAACAAACGCACAGTCTCTCCAATCTGGTATGCTTCCACTTCAGAACATGCAACAGACTCACCCTAATTTCGGCCAGCAAAGACAGCAAAACCAGCAATAA
Protein sequence
MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQHQQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHPNFGQQRQQNQQ
Homology
BLAST of Cp4.1LG03g15010 vs. ExPASy Swiss-Prot
Match:
Q4V3C1 (Mediator of RNA polymerase II transcription subunit 8 OS=Arabidopsis thaliana OX=3702 GN=MED8 PE=1 SV=1)
HSP 1 Score: 520.8 bits (1340), Expect = 1.9e-146
Identity = 335/557 (60.14%), Postives = 399/557 (71.63%), Query Frame = 0
Query: 14 QQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWQ 73
+ QP P VAE+LN ++++LNLE++KTRA +L KAI+RILEDFD YGRTNTTPKWQ
Sbjct: 2 ETQPQQPPPPPVAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQ 61
Query: 74 DILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNS 133
DILGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME DDN+
Sbjct: 62 DILGQYSMVNLELFNIVEEVKRVSNAFVVLPKNVNAMNAAILPVMLSSKLLPEMETDDNA 121
Query: 134 KRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTL 193
KR+QLL G+Q++PI QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+
Sbjct: 122 KREQLLQGVQSLPIPMQIERLKARMDMIAAACENAERVLADTRKAYGFGTRQGPSMLPTM 181
Query: 194 DKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSG 253
DK QAAKIQEQE +LR AVN G+G +LP DQRQIT LP HL DVL + D +G
Sbjct: 182 DKGQAAKIQEQEKMLRDAVNDGKGTQLPPDQRQITTALPPHLADVLIIND--------AG 241
Query: 254 MYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTAN 313
A P S+NI G + Q G+Q VGRSAASPSG +FDNTTSPLPY+NSPR+T
Sbjct: 242 KIA--LPGQSNNINNQG--MMQVSGTQFVGRSAASPSG-PNFDNTTSPLPYSNSPRAT-G 301
Query: 314 VMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH--QQLLA--QQQM 373
++NVPSPQ Q QQQQ QQQ QQR KLMQLPQH QQLLA QQQ+
Sbjct: 302 MVNVPSPQHQIQQQQFQQQ----------------QQRSKLMQLPQHQQQQLLAQQQQQL 361
Query: 374 RQSPMQGIGQ-------------------IHGQHQMQFSQPL-AHQQFQGRQMSSGHIQH 433
RQS MQG+GQ HGQHQM +SQP+ AHQQFQ RQ+S GHIQH
Sbjct: 362 RQSSMQGLGQSQIPALHDMHGQAQQKFQTSHGQHQMPYSQPMGAHQQFQARQLSGGHIQH 421
Query: 434 GITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY- 493
++Q QL MNRHL+QFSG ANS+LF +AQ +PSSQMIPN+S +M SQ L+PR+Q
Sbjct: 422 SMSQGQLNPA--MNRHLNQFSGGANSALFTSAQGSPSSQMIPNMS-SMQSQTLVPRMQQF 481
Query: 494 ---GSNPQRSH-AQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQS 542
G+NPQRSH +Q+L DQMFN G +QQ QQQQQQQ QG +GNM TN QS
Sbjct: 482 GVSGTNPQRSHSSQMLGDQMFNTSGMMQTQQTQIQQSQQQQQQQ--QQGGYGNMQTNQQS 522
BLAST of Cp4.1LG03g15010 vs. NCBI nr
Match:
XP_023526991.1 (mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 998 bits (2581), Expect = 0.0
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP 540
Query: 541 NFGQQRQQNQQ 551
NFGQQRQQNQQ
Sbjct: 541 NFGQQRQQNQQ 551
BLAST of Cp4.1LG03g15010 vs. NCBI nr
Match:
XP_023526992.1 (mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 992 bits (2564), Expect = 0.0
Identity = 550/551 (99.82%), Postives = 550/551 (99.82%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQ PPGSQLVGRSAASPSGATSFDNTTS
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQ-PPGSQLVGRSAASPSGATSFDNTTS 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP 540
Query: 541 NFGQQRQQNQQ 551
NFGQQRQQNQQ
Sbjct: 541 NFGQQRQQNQQ 550
BLAST of Cp4.1LG03g15010 vs. NCBI nr
Match:
KAG6581760.1 (Mediator of RNA polymerase II transcription subunit 8, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 983 bits (2541), Expect = 0.0
Identity = 544/552 (98.55%), Postives = 545/552 (98.73%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGV QNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMN+PSPQQQTQQQQQQQQQQQQQQQQQ LQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQQQQQ----LQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQ-LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQQ LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
Query: 541 PNFGQQRQQNQQ 551
PNFGQQRQQNQQ
Sbjct: 541 PNFGQQRQQNQQ 548
BLAST of Cp4.1LG03g15010 vs. NCBI nr
Match:
XP_022956012.1 (mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita moschata])
HSP 1 Score: 980 bits (2533), Expect = 0.0
Identity = 540/552 (97.83%), Postives = 541/552 (98.01%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGV QNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMN+PSPQQQTQQQQQQQQQQQQQ LQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQ--------LQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQ-LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQQ LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
Query: 541 PNFGQQRQQNQQ 551
PNFGQQRQQNQQ
Sbjct: 541 PNFGQQRQQNQQ 544
BLAST of Cp4.1LG03g15010 vs. NCBI nr
Match:
XP_022980584.1 (mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita maxima])
HSP 1 Score: 977 bits (2525), Expect = 0.0
Identity = 539/551 (97.82%), Postives = 542/551 (98.37%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGV QNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVVQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEV+DNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVEDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTT
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTP 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMN+PSPQQQTQQQQQQQQQQQQQQQ LQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQQQ------LQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQ LAPQGAFGNM+TNAQSLQSGMLPLQNMQQTHP
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQ-LAPQGAFGNMSTNAQSLQSGMLPLQNMQQTHP 540
Query: 541 NFGQQRQQNQQ 551
NFGQQRQQNQQ
Sbjct: 541 NFGQQRQQNQQ 544
BLAST of Cp4.1LG03g15010 vs. ExPASy TrEMBL
Match:
A0A6J1GV67 (mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457835 PE=4 SV=1)
HSP 1 Score: 980 bits (2533), Expect = 0.0
Identity = 540/552 (97.83%), Postives = 541/552 (98.01%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGV QNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMN+PSPQQQTQQQQQQQQQQQQQ LQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQ--------LQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQ-LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQQ LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
Query: 541 PNFGQQRQQNQQ 551
PNFGQQRQQNQQ
Sbjct: 541 PNFGQQRQQNQQ 544
BLAST of Cp4.1LG03g15010 vs. ExPASy TrEMBL
Match:
A0A6J1IZN9 (mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479910 PE=4 SV=1)
HSP 1 Score: 977 bits (2525), Expect = 0.0
Identity = 539/551 (97.82%), Postives = 542/551 (98.37%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGV QNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVVQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEV+DNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVEDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTT
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTP 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMN+PSPQQQTQQQQQQQQQQQQQQQ LQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQQQ------LQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQ LAPQGAFGNM+TNAQSLQSGMLPLQNMQQTHP
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQ-LAPQGAFGNMSTNAQSLQSGMLPLQNMQQTHP 540
Query: 541 NFGQQRQQNQQ 551
NFGQQRQQNQQ
Sbjct: 541 NFGQQRQQNQQ 544
BLAST of Cp4.1LG03g15010 vs. ExPASy TrEMBL
Match:
A0A6J1GVL6 (mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457835 PE=4 SV=1)
HSP 1 Score: 973 bits (2516), Expect = 0.0
Identity = 539/552 (97.64%), Postives = 540/552 (97.83%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGV QNQPQQQQPLLAPQ VVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVVQNQPQQQQPLLAPQAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQ PPGSQLVGRSAASPSGATSFDNTTS
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQ-PPGSQLVGRSAASPSGATSFDNTTS 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMN+PSPQQQTQQQQQQQQQQQQQ LQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQ--------LQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQ-LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQQ LAPQGAFGNMATNAQSLQSGMLPLQNMQQTH
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTH 540
Query: 541 PNFGQQRQQNQQ 551
PNFGQQRQQNQQ
Sbjct: 541 PNFGQQRQQNQQ 543
BLAST of Cp4.1LG03g15010 vs. ExPASy TrEMBL
Match:
A0A6J1IWU9 (mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479910 PE=4 SV=1)
HSP 1 Score: 970 bits (2508), Expect = 0.0
Identity = 538/551 (97.64%), Postives = 541/551 (98.19%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MATMDGV QNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF
Sbjct: 1 MATMDGVVQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEV+DNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVEDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN
Sbjct: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTS 300
VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQ PPGSQLVGRSAASPSGATSFDNTT
Sbjct: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQ-PPGSQLVGRSAASPSGATSFDNTTP 300
Query: 301 PLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH 360
PLPYANSPRSTANVMN+PSPQQQTQQQQQQQQQQQQQQQ LQVQQRQKLMQLPQH
Sbjct: 301 PLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQQQ------LQVQQRQKLMQLPQH 360
Query: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN
Sbjct: 361 QQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLGQGN 420
Query: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL
Sbjct: 421 QMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYGSNPQRSHAQIL 480
Query: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQNMQQTHP 540
SDQMFNMGGGSAGGMMPMQQQQQQQQQ LAPQGAFGNM+TNAQSLQSGMLPLQNMQQTHP
Sbjct: 481 SDQMFNMGGGSAGGMMPMQQQQQQQQQ-LAPQGAFGNMSTNAQSLQSGMLPLQNMQQTHP 540
Query: 541 NFGQQRQQNQQ 551
NFGQQRQQNQQ
Sbjct: 541 NFGQQRQQNQQ 543
BLAST of Cp4.1LG03g15010 vs. ExPASy TrEMBL
Match:
A0A1S3CPL4 (mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502790 PE=4 SV=1)
HSP 1 Score: 862 bits (2228), Expect = 3.55e-312
Identity = 484/558 (86.74%), Postives = 507/558 (90.86%), Query Frame = 0
Query: 1 MATMDGVAQNQPQQQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDF 60
MAT+DG QNQPQQQQPL A QVV AERLNQAVQQQLNLEA+K RATTLFKAISRILEDF
Sbjct: 1 MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDF 60
Query: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS
Sbjct: 61 DVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLS 120
Query: 121 SKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
SKLLPEMEVDDNSKR+QLLLGM NMP+STQIEKLKTRIEMIGAACESAEKILAETRKAYC
Sbjct: 121 SKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYC 180
Query: 181 FGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLN 240
FGMRQGPAI PTLDKAQAAKIQEQENLLRAAVNFGEGLRLP +QRQIT TLPMHL+DVLN
Sbjct: 181 FGMRQGPAITPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLN 240
Query: 241 VGDGVQSFNETSGMYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATS---FDN 300
GDGVQSFNETSGMYAK+TPLTS NI G+++QQPPGSQLVGRSAASPSGATS FDN
Sbjct: 241 AGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN 300
Query: 301 TTSPLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQL 360
+TSP+PYANSPRS+AN+MN PSPQQQTQQQQQQQ LQ Q++KLM L
Sbjct: 301 STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQ--------------LQQVQQRKLM-L 360
Query: 361 PQHQQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQLG 420
PQHQQLLAQQQMRQS MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGH+QHGITQSQLG
Sbjct: 361 PQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLG 420
Query: 421 QGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQYG---SNPQR 480
QGNQMNRHL QFSGAANSSLFN AQTTP+SQMIPNISATMSSQPLM R+Q+G +N QR
Sbjct: 421 QGNQMNRHLHQFSGAANSSLFNVAQTTPTSQMIPNISATMSSQPLMSRMQHGLPGTNLQR 480
Query: 481 SHA-QILSDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGMLPLQ 540
+HA QILSDQMF MGGGS GGMMPMQQQQQQQQ QLA QGAFGNM NAQSLQSGM+PLQ
Sbjct: 481 NHASQILSDQMF-MGGGSTGGMMPMQQQQQQQQAQLASQGAFGNMPANAQSLQSGMVPLQ 540
Query: 541 NMQQTHPNFGQQRQQNQQ 551
NMQQTHPNFGQQRQQNQQ
Sbjct: 541 NMQQTHPNFGQQRQQNQQ 542
BLAST of Cp4.1LG03g15010 vs. TAIR 10
Match:
AT2G03070.1 (mediator subunit 8 )
HSP 1 Score: 520.8 bits (1340), Expect = 1.4e-147
Identity = 335/557 (60.14%), Postives = 399/557 (71.63%), Query Frame = 0
Query: 14 QQQPLLAPQVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRILEDFDVYGRTNTTPKWQ 73
+ QP P VAE+LN ++++LNLE++KTRA +L KAI+RILEDFD YGRTNTTPKWQ
Sbjct: 2 ETQPQQPPPPPVAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQ 61
Query: 74 DILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEVDDNS 133
DILGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME DDN+
Sbjct: 62 DILGQYSMVNLELFNIVEEVKRVSNAFVVLPKNVNAMNAAILPVMLSSKLLPEMETDDNA 121
Query: 134 KRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTL 193
KR+QLL G+Q++PI QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+
Sbjct: 122 KREQLLQGVQSLPIPMQIERLKARMDMIAAACENAERVLADTRKAYGFGTRQGPSMLPTM 181
Query: 194 DKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVDVLNVGDGVQSFNETSG 253
DK QAAKIQEQE +LR AVN G+G +LP DQRQIT LP HL DVL + D +G
Sbjct: 182 DKGQAAKIQEQEKMLRDAVNDGKGTQLPPDQRQITTALPPHLADVLIIND--------AG 241
Query: 254 MYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSGATSFDNTTSPLPYANSPRSTAN 313
A P S+NI G + Q G+Q VGRSAASPSG +FDNTTSPLPY+NSPR+T
Sbjct: 242 KIA--LPGQSNNINNQG--MMQVSGTQFVGRSAASPSG-PNFDNTTSPLPYSNSPRAT-G 301
Query: 314 VMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKLMQLPQH--QQLLA--QQQM 373
++NVPSPQ Q QQQQ QQQ QQR KLMQLPQH QQLLA QQQ+
Sbjct: 302 MVNVPSPQHQIQQQQFQQQ----------------QQRSKLMQLPQHQQQQLLAQQQQQL 361
Query: 374 RQSPMQGIGQ-------------------IHGQHQMQFSQPL-AHQQFQGRQMSSGHIQH 433
RQS MQG+GQ HGQHQM +SQP+ AHQQFQ RQ+S GHIQH
Sbjct: 362 RQSSMQGLGQSQIPALHDMHGQAQQKFQTSHGQHQMPYSQPMGAHQQFQARQLSGGHIQH 421
Query: 434 GITQSQLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY- 493
++Q QL MNRHL+QFSG ANS+LF +AQ +PSSQMIPN+S +M SQ L+PR+Q
Sbjct: 422 SMSQGQLNPA--MNRHLNQFSGGANSALFTSAQGSPSSQMIPNMS-SMQSQTLVPRMQQF 481
Query: 494 ---GSNPQRSH-AQILSDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQS 542
G+NPQRSH +Q+L DQMFN G +QQ QQQQQQQ QG +GNM TN QS
Sbjct: 482 GVSGTNPQRSHSSQMLGDQMFNTSGMMQTQQTQIQQSQQQQQQQ--QQGGYGNMQTNQQS 522
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q4V3C1 | 1.9e-146 | 60.14 | Mediator of RNA polymerase II transcription subunit 8 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_023526991.1 | 0.0 | 100.00 | mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita pepo... | [more] |
XP_023526992.1 | 0.0 | 99.82 | mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucurbita pepo... | [more] |
KAG6581760.1 | 0.0 | 98.55 | Mediator of RNA polymerase II transcription subunit 8, partial [Cucurbita argyro... | [more] |
XP_022956012.1 | 0.0 | 97.83 | mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita mosc... | [more] |
XP_022980584.1 | 0.0 | 97.82 | mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita maxi... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GV67 | 0.0 | 97.83 | mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1IZN9 | 0.0 | 97.82 | mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1GVL6 | 0.0 | 97.64 | mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Cucurbita mo... | [more] |
A0A6J1IWU9 | 0.0 | 97.64 | mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Cucurbita ma... | [more] |
A0A1S3CPL4 | 3.55e-312 | 86.74 | mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucumis melo... | [more] |
Match Name | E-value | Identity | Description | |
AT2G03070.1 | 1.4e-147 | 60.14 | mediator subunit 8 | [more] |