Cp4.1LG03g13440 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATGGTGGGAGTGGTTTCAGACTGGACAGGGAGTTCATTTGGTCAAACTTGAAACCAGAGGAAAAAGAAAGTCGCCAATGGCGGGGGAATCTGAAGCTGCTCGGCATCCCTACGCACCCACAGATCTGGAACTCCCCGGATATGTTCCTATTTCACTACCCCTCACTACTATTCTCGGCGTTTATCTCCTTTCTTCTCTCTTTATCACTTTGCTGCTCTGGACTCTTTCCGGTATGCTTTCATCTCTTACTTTGATATTTACTGTCGTTTTTTGGATTATGTTTTATGCGCTGCGAATTCTGCTTGATTTCTTGCTGGAGAAGAAGACCGATGGTTTTCATAATCCGTAGTTTGTTGTTGTATTGGATTTCTGTCCACTTGTTAGAGGTCACTTGTTGAGTGAAGTAATTGGAAGCAAAATCAAACAATTTCAAATATTCTATGTTTTTCGTGTCCTCCAAGAATTCTATTGAATGTCTTTGCTGAATCCGAAGGCTGGCGGTGAAACCGATGTAAAAATTCAAATCTGTGTCTCGTTCAATTATTCTTTTCGAGAGGATCGAGATCTGTTAAACGGATAGACGCCTTGCCTTCCTACTCCTTAACTTGTGCTATTGTCTTTTGGTTTAGATGATTGCTTTAGAAAGGGAATACTGATGGGACGGACTAAGCGAGGATGTCTTTGATTATACCTGAGTGTGAAAGAATGAAACATGTAGCAAACTGAAATCTATTTGGCCATTTATGGTTCTGTCAATCCGCGTTTGACTTCATTTGATTGGTTAATTTTGATACGATACAATATCTATTTTAGATTTAAACTCTTGATATTTCCTTTGGTTATGCATACTCCCCTTTCTCTAAACAATCATTCATCCATACACTTTCTACTAATGATGAACATAAATTTATCTAGATTTCAGAAATGCTATGAGGATGAAATGTTAATGCTAAGATTACTATTTGGATATTCGTGATTAGCTTGTAAGTTTGTTTGTGTTGAGTGGTTATGGATATAGTGGGTTGAGAGTGAGAGAGTGAGAGAGAGGCAGATTTGTATAGTTTTGGAAAGAGTCCTAGGCCTCTCGTAGAGCTTGGAACCTTGTAATTTGTCTAATATCAATATAATATTTCAATTAACCTGTCCAATTTTTGGTTCCTATCAAATTAGTTCCACTACATTTGTGCTCGAAATTGAATCTTTTCAAGTCTAGAAGAATATTGATGAAGATGTTGTCCACAAATGGATCTTTTTCTCTTTAGTGCAGATAGTAAGGATGCTCATTTTGGGGTCCTTGTCCTTCGAAGTGTTTTTTCTTGTAGCTTGAGCAATCCCTCCCCAATGGTTCCACTTTTTTCCTTAGTGTAGGTAGAATGTTGTACAAACACTAGATCCTAACACCATGATTGAAGTATGAAACACCTGATAATGGGCACTATAATCGAACACTTAGTGTAGGTAGAGTGTTGTATAAGCACTTATGTTGCAAGCTAGGACATAGTTTGCTTTCCTATTGCACCCTGTGTTTTTTTCCTATTGAAGTATGAAACACCTGATAATGGGCACTATATTCAAACACTCAGTGTAGGTAGAGTATTCTACAAGCACATATTTTCCTTAGTGTAGGTAGAGTGTTGTACAAGCACTTATGTTGCAAGCTATGACATATTTTGCTTTCCTATTGCACCCTGTGTTTTTTTCCTATTGAAGTATGAAACACCTGATAATGGGCACTATATTCAAACACTCAGTGTAGGTAGAGTATTCTACAAGCACATATTTTCCTTAGTGTAGGTAGAGTGTTGTACAAGCACTTATGTTGCAAGCTATGACATATTTTGCTTTCCTATTGCACCCTGTGTTTTTTTTATGTTCCCTTCCGTGGTGTTTGTACACGTGTTCTCTCCATCTTTATCTATTTCTTTTTATCTGAATTTAGTAATGGAAAAAACTGTAGTTCTTAGAGCTGTTTCGAAAAGGTTCTATGCTTGTTGCTTTATCTTCATTTCCCCCTTATAACAGGACGACTTCCCAAAAAAACAAAGATTGAGAGGCTGCTCATGTGCTGGTGGATATTTACGGGCCTTACCCACATTGTTCTCGAGGGTTACTTTGTTTTCTCTCCAGAATTTTACAAGGACAGTTCTTACCTTGCTGAAGTTTGTAAGTTAATTTAATTCACTTTCTTTGTTACCCTAGCTGTGGTACTGGAAGGGCTGTATGGATGCTCCTCTAATAATGTTCATGTGCACTACTTACCAGGGAAAGAATACAGCAAGGGAGATTCTCGATACGCAACTCGGGACTCTGCGATTGTCAGTCTTGAAGGACTGACTGCTGTTTTAGAGGGTCCAGCTTGCATCTTAGCAGTGTAAGAATTTATCATCTGTGTGGTTTTGGGAGAGAATAGTTAATCAATTTCTAAATAACTAAGATACAAGAAGTTATGATACAAAGAAAATACAAAAGAGGTAACACTAGCTAATAAAATCTAAACTAAAGAATTTTGAAATGCTATACATATAAGGAATTACATTTGAACTTTCTGTTCATAATTAGCCATTCATCAACAAATTTGTTGGGCTGTGTATAATTCGCAGGTATGCAATAGCTACAGACAAGTCGTACAGTTACATACTGCAGTTCGCCATATCATTGGGACAGCTATATGGAACTTTCATGTACTACATAACTGCTCTGTTGGATGGTGATAATTTTTCTTCATCCCCAATTTATTACTATTTATACTACGTATTGTTAAATTCCTTCTGGATTCTTATTCCTTCGCTTATCGCTATCCGGTGTTGGAAGAAAATTTGTATTGCTATGAGCAGTGAAAGCCACAAGAAAACCAAAGTTCCCTAAGAAGTGATCCATATTATGACGTCTACCCCTTTGGATCCATGGAAAATAATAGATTAGATAGTACACAAGATTCTTGTTGTATTGTAATCTAAGTTATTGTCGTGTGACATTCAGAAAACGAGACACTCGTGAAATTTGAACATTTACACGAAGTTTGGGTTTGTTGATTATGCTTTCTTGGGGTGTTAAATTGACGATGTCGATTCGAGTTTGTTGTAGGTTATTTCATCATCTTTTTAGCGTAAAGGTAAAGCATTTCTTAGATATTTGCTATTGTAT TAATGGTGGGAGTGGTTTCAGACTGGACAGGGAGTTCATTTGGTCAAACTTGAAACCAGAGGAAAAAGAAAGTCGCCAATGGCGGGGGAATCTGAAGCTGCTCGGCATCCCTACGCACCCACAGATCTGGAACTCCCCGGATATGTTCCTATTTCACTACCCCTCACTACTATTCTCGGCGTTTATCTCCTTTCTTCTCTCTTTATCACTTTGCTGCTCTGGACTCTTTCCGGACGACTTCCCAAAAAAACAAAGATTGAGAGGCTGCTCATGTGCTGGTGGATATTTACGGGCCTTACCCACATTGTTCTCGAGGGTTACTTTGTTTTCTCTCCAGAATTTTACAAGGACAGTTCTTACCTTGCTGAAGTTTGGAAAGAATACAGCAAGGGAGATTCTCGATACGCAACTCGGGACTCTGCGATTGTCAGTCTTGAAGGACTGACTGCTGTTTTAGAGGGTCCAGCTTGCATCTTAGCAGTGTATGCAATAGCTACAGACAAGTCGTACAGTTACATACTGCAGTTCGCCATATCATTGGGACAGCTATATGGAACTTTCATGTACTACATAACTGCTCTGTTGGATGGTGATAATTTTTCTTCATCCCCAATTTATTACTATTTATACTACGTATTGTTAAATTCCTTCTGGATTCTTATTCCTTCGCTTATCGCTATCCGGTGTTGGAAGAAAATTTGTATTGCTATGAGCAGTGAAAGCCACAAGAAAACCAAAGTTCCCTAAGAAGTGATCCATATTATGACGTCTACCCCTTTGGATCCATGGAAAATAATAGATTAGATAGTACACAAGATTCTTGTTGTATTGTAATCTAAGTTATTGTCGTGTGACATTCAGAAAACGAGACACTCGTGAAATTTGAACATTTACACGAAGTTTGGGTTTGTTGATTATGCTTTCTTGGGGTGTTAAATTGACGATGTCGATTCGAGTTTGTTGTAGGTTATTTCATCATCTTTTTAGCGTAAAGGTAAAGCATTTCTTAGATATTTGCTATTGTAT ATGGCGGGGGAATCTGAAGCTGCTCGGCATCCCTACGCACCCACAGATCTGGAACTCCCCGGATATGTTCCTATTTCACTACCCCTCACTACTATTCTCGGCGTTTATCTCCTTTCTTCTCTCTTTATCACTTTGCTGCTCTGGACTCTTTCCGGACGACTTCCCAAAAAAACAAAGATTGAGAGGCTGCTCATGTGCTGGTGGATATTTACGGGCCTTACCCACATTGTTCTCGAGGGTTACTTTGTTTTCTCTCCAGAATTTTACAAGGACAGTTCTTACCTTGCTGAAGTTTGGAAAGAATACAGCAAGGGAGATTCTCGATACGCAACTCGGGACTCTGCGATTGTCAGTCTTGAAGGACTGACTGCTGTTTTAGAGGGTCCAGCTTGCATCTTAGCAGTGTATGCAATAGCTACAGACAAGTCGTACAGTTACATACTGCAGTTCGCCATATCATTGGGACAGCTATATGGAACTTTCATGTACTACATAACTGCTCTGTTGGATGGTGATAATTTTTCTTCATCCCCAATTTATTACTATTTATACTACGTATTGTTAAATTCCTTCTGGATTCTTATTCCTTCGCTTATCGCTATCCGGTGTTGGAAGAAAATTTGTATTGCTATGAGCAGTGAAAGCCACAAGAAAACCAAAGTTCCCTAA MAGESEAARHPYAPTDLELPGYVPISLPLTTILGVYLLSSLFITLLLWTLSGRLPKKTKIERLLMCWWIFTGLTHIVLEGYFVFSPEFYKDSSYLAEVWKEYSKGDSRYATRDSAIVSLEGLTAVLEGPACILAVYAIATDKSYSYILQFAISLGQLYGTFMYYITALLDGDNFSSSPIYYYLYYVLLNSFWILIPSLIAIRCWKKICIAMSSESHKKTKVP Homology
BLAST of Cp4.1LG03g13440 vs. ExPASy Swiss-Prot
Match: O48962 (Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana OX=3702 GN=At1g20050 PE=2 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.0e-74 Identity = 138/224 (61.61%), Postives = 178/224 (79.46%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy Swiss-Prot
Match: Q9FTZ2 (Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0103600 PE=2 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.3e-65 Identity = 124/211 (58.77%), Postives = 159/211 (75.36%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy Swiss-Prot
Match: Q9JJ46 (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus OX=10116 GN=Ebp PE=1 SV=3) HSP 1 Score: 137.5 bits (345), Expect = 1.8e-31 Identity = 81/219 (36.99%), Postives = 126/219 (57.53%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy Swiss-Prot
Match: P70245 (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus OX=10090 GN=Ebp PE=1 SV=3) HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30 Identity = 78/218 (35.78%), Postives = 128/218 (58.72%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy Swiss-Prot
Match: Q60490 (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus OX=10141 GN=EBP PE=1 SV=3) HSP 1 Score: 128.6 bits (322), Expect = 8.5e-29 Identity = 76/205 (37.07%), Postives = 112/205 (54.63%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. NCBI nr
Match: XP_023526321.1 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438 bits (1126), Expect = 7.97e-155 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. NCBI nr
Match: KAG6581969.1 (putative 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018388.1 putative 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 436 bits (1122), Expect = 3.25e-154 Identity = 220/222 (99.10%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. NCBI nr
Match: XP_022955667.1 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase [Cucurbita moschata]) HSP 1 Score: 435 bits (1118), Expect = 1.32e-153 Identity = 219/222 (98.65%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. NCBI nr
Match: XP_022980063.1 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase [Cucurbita maxima]) HSP 1 Score: 434 bits (1117), Expect = 1.88e-153 Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. NCBI nr
Match: XP_038881035.1 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase [Benincasa hispida]) HSP 1 Score: 383 bits (984), Expect = 3.79e-133 Identity = 192/224 (85.71%), Postives = 207/224 (92.41%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy TrEMBL
Match: A0A6J1GU98 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cucurbita moschata OX=3662 GN=LOC111457598 PE=3 SV=1) HSP 1 Score: 435 bits (1118), Expect = 6.40e-154 Identity = 219/222 (98.65%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy TrEMBL
Match: A0A6J1IY56 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cucurbita maxima OX=3661 GN=LOC111479580 PE=3 SV=1) HSP 1 Score: 434 bits (1117), Expect = 9.10e-154 Identity = 220/222 (99.10%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy TrEMBL
Match: A0A6J1E0U0 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Momordica charantia OX=3673 GN=LOC111024900 PE=3 SV=1) HSP 1 Score: 369 bits (947), Expect = 7.96e-128 Identity = 180/223 (80.72%), Postives = 201/223 (90.13%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy TrEMBL
Match: A0A1S3BY31 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cucumis melo OX=3656 GN=LOC103494647 PE=3 SV=1) HSP 1 Score: 364 bits (935), Expect = 5.36e-126 Identity = 185/222 (83.33%), Postives = 199/222 (89.64%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. ExPASy TrEMBL
Match: A0A0A0KVP4 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G007050 PE=3 SV=1) HSP 1 Score: 362 bits (929), Expect = 4.40e-125 Identity = 182/222 (81.98%), Postives = 198/222 (89.19%), Query Frame = 0
BLAST of Cp4.1LG03g13440 vs. TAIR 10
Match: AT1G20050.1 (C-8,7 sterol isomerase ) HSP 1 Score: 281.2 bits (718), Expect = 7.3e-76 Identity = 138/224 (61.61%), Postives = 178/224 (79.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|