Cp4.1LG03g13260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTCTCCAAGGCTTCCTCAGCCATGGCCTCCATGCCTTGCACTAGGGTTCGCTTTTACTCTTTGTTCTCTTTCTTTTTCTCTATATTTTCGTTTCGCAATTGCACTCTCTCATGTTTTCTCTGAATTTTTCTTATTGTTTTGTTGGAATGTTTTCGATGTTGTCGGTTTTAAGCTGTGGATACTCTCCAATGTAGCTGAAGCAGTCTCGCGGTTTATTTTGTTTTGAATCTTTGTTGATCGGCCTTGTTATATCTTCTGCTACTTTCTCTTACAGCATGACGATGAATATCTAACGGATTCGATTTTGTTGCTCCTTTTGTTTGAAATTGGTACTGCTAATTTTGTTGCTAAGATCTGTAACATCATGATGTATGATCCTTCCTTCTCGTGTCTTGTATATCTTGTCATAGTGGGCAGTAAGTCTGTAATGTTGTCGGGGTTTATTGATAGATTTATTGAACAGAAACATGTGTTTTAGCTTTATTGACGAATGGGAGTTTCAGGTTGGAAGCGTATGTGTCTGGCCGAGCATGAAACAGCTTTCTTTTAGAAAAGACCTTTTGTATGGGGTTATGAGACTCTTATCTATACCATTGAAAACATTGCGTGGAGCTAGTCGTTCACTTAAAGTTGCTCAGTTCTGCAGTGTCGTCAATATGTCTTCCACATTGCAAATTGAACTGGTAAGCTGTTAGATCTGGAAATTGCTTTTATGGTGTCAATGGCATCAGTTCTTTTCTCCCATGATGGTTTTGTGGTGGTCATTTTATGATTACTTTCTTTGGTTAACATTTTCTTTCTAAATTCATGCTTTAATTCTAAAAAAATTTCATCTGAGAGAATTTCTAATTGTAGGAAGAGGCCCGAATGGTCTAAATTTCAGTGTGTTATTTCTTTCCAAAGTTAGATTGCTTCAACTATTGGCATCCATAATATATAACTTTCACCTGCTCAGCTACACGATATATAATTCTTGATCTGAGTCCATTCAAGTAAGGTGGCTACAAATTATTTTTAATAAGACATTAGCCATGCTCTTTTTGTGCTCTCACCCTAAATGAATCTATTTTTAGGATTGCTGGTTGTCCACTATCATTGTACGTTCTGCATCCCATAATAACTGCTTAGTCAGCTGCAGCATAAACATTCATTGCGTATCTCTATTTTATTCTACTCATTCTTCGATAGGTACCTTGTCTTCGTGACAACTATGCATACCTCTTACATGATGTTGATACGGGCACAGTTGGGGTTGTTGATCCTTCTGAAGCTGTACCAGTTATAGATGCTTTAAGAAAGAAAAACAGAAATTTGACATATATACTTAATACTCATCATCATCATGATCACACTGGTGGGAATGAAGAATTAAAAGCAAGGTACGGAGCAAAGGTATGAATTTAATTTTTTTTTTGCATTGCATCAATATTCTAGTTGGTCTCATCCTATAAATGTTGTATGTTTGAGTCCTAAAGGTTGGTCATAGAGGTAAGAACCTGTGTACCTAACCTAGCACAAGACTTCTTGAGGCCATTATGTGAGAAATTCATTGACTCTCAATTTCTCGATGCCAGAAGAATGTTTATATATATTAGTCTCTATTCTTAATCCTTTTATCTAGTAAACATAGTGGTGAATATTTTTTTAAATATAAACACAGATATCTATTGTCATGAGAACATCATACCTTATCACGTGCAAGCAATGTTACATTCTTCAGTACTGATCAGAAAGTATTTTGTGTATTTTGACTTGTTTTGAATTAAAGACTTCCCTAACTTGTCCTTTAAATTAAGGCTTGGATTGAAATGAATTAGGGAATTGATGCTGACTTATGTTATACAATAGTCCATGAGATATTTCTTATCCTTGAATTGAGGGTTTACTTTTACAATCCATAGAACTTCTGTCAATTTTTTATACCCTTTTTTCTGGTTGTAGGTGATTGGCTCTGGAATAGATAGCGACAGAATTCCTGGAATTGACATAGCTTTAAAAGATGGAGACAAGTGGATGTTTGCTGGGCATGAAGTGCAAGTAATGGAAACTCCTGGTCATACTCGAGGTGTTTGTTACTTGTTACTTTAGATTAGTTTCTTGTATGATAAGATGTTGTAGACCACGGGATTAAAGGAGATCATTCTCCAAGAGATCTAATCCCAATCTTTATTATGATTCAAAATGTGTAGAATATATGATAGAAACCCTTACTTATAGGGAATTAGAGAGCAAACTAAAGTCCAATCCAAAAATACAGTTAGATAGTTAAAAAAGGATTAGTCAAGGAATTGTAGTAATTATCTAAGATTAATCTAATCCTACAATCCTATTAAATCAAAATAGGTCCGCTAGATTTGTTTCTTGTATGATAACCCTCCCCTTCCTCCGGACGTGCATGAAAAATGAGGAAATAAAAGAAGAGAGTGAGAATAGAAATGGAAACTTCTATTGTTATTCTCTATCATTGCTACATTGTCTCTCATATGGTTTAGCCTTGCTTCTCTCTCCCTATTGGATTTAACTTTGATTATTATTCTTTATTAATTTTCTCATAGCTGATTTTTCCTTGGATACTTCATGTGGGTTTGTTGTGCCTATGGAACTCGGGCTTCTCACCATTCTATACTTTTAGGCCCTGATTTGTTGTTTTTGATTTTGACTGAATTCAGGTCATATTAGCTTCTACTTTCCTGGATCCGCTGCAATATTTACTGGAGATACTTTATTCAGCTTATCTTGTGGCAAGCTTTTTGAAGGAACTCCTGAACAGGTTTGTTTGTCTTATATTTTTCATTTAATTGGATGTTATCTAAATGTGGTACTTCAAGAATGCGGAATGCCAGATAATTTTTTCTTGTTAGATGTACTTATGAATTATTATCTGCTTCTTTGTGCTTTATTTTTCGCTCCTTTGGCTCTTGTCCTGTTGTCCCACTGAGTTTAAGAATATTTGACTAAAGGATTACTCAAAATCTTGTATGTTGGATTGGAAGTCATCTATTGTTAACCTTAATGATATTCAGTCTGTTGTTGAAGTCATTTCATGGCTTAAGATTGATGGAGATGAGAGCTCTTTGATTGGTATGGTTTGTCAGGCCTCCAATCTTGAGAGATTAGTGTCTTTAGGGGTGAGGTTTTGAGTGGGATTCCATATTTTTCCTTCATAATTCAAGATTCCTTCCTTTGTTAGTTTACGGAAGAAAAACTTCAGGAAGGACTTCTTCTCGGAAGGGGTCCAGGGTGTCTCGTTTAGTCAGATGGAAGATTGTGTTGTGTTCAATCAAACTAGGTGGATTTGTATAGGGAATTTGAAACTTTGTGATGAAGCCTTGCGAAGTCGTTTCTTTTGATGCTAATGCTATATTAACATAGGGTTATAGTGCGCAAATATGACCCTCATTTAGCTACGTGTGCTTCAATTTGTGGGTGTAAAGATACTTTTAGAATTGTATGAACATCTTATCTCATCTGGTTATCTAACGTTCTCTAAGTTTTTGAAGTTCTCTATTCAAAATTGAACAGCAGGGTGAAGGATAACACCCCATCCTTAGCTATTTAAGCCCTATCTTTGTCACTTCTCTCAGAAATTTGTTTCAGTGGCTTTTATCCTTTTTAAGGTTTCTATTTTCTACAACTTCGGTTTTGGCCTTCCCTGGTCTGATAGGTGGATCTTTTAAGATTTCCTCATTGCTCTCCTTGTTCTCCTGGCCTTGCCTTGGGCTAGGGATGTTCCTCAACGTGCTGCCATTTCTTTGGGGGAGATTTTCTGTTGTTCCATTTATTCTCTTCCCACGTACCCTGTTTTGTGGTTCTCTCATGAATAAAATGGCACTCAGCTTCAATATGCTTTGTTCACTCATGAAGTATCTATATCCATGTTATGGAAAAACTATTGTTATTAAAGAGTGAATTTGCTGCTGAATGTGAATTAAGCTTAGAAACTTGATTGCTTTTAGTTATTCAGATTCTAATTGTTTATATCACAGATGCTATCTTCCCTTAAAAAGATCACTTCTTTGCCAGATGATACCAACATATTTTGCGGTCATGAATATACTCTGGTCAGTAACTTATTGACCTTCCTTTATTTATTTTCTACGATACTCCAATTTTTTAAGCTTGAATGCCATTTGCCTAATTGTAAGGTTACCATTTAGCAGAGTAACTCTAAGTTCGCTATGTCCATTGAACCTAAGAACGAGGCTCTCAAATCTTATGCATCCCAGGTTGCCAATCTACGAAGCAAGGGCTTGCCAACGGTAACTTTTTAGCTATTCTTGTATGGATGGTTATTTGATATTTAAATTGGTTACTAGACAAATTTCTTTCAATTTGCGTAAATATGGGTTATTGTTTCTTGCATTTGAAAACCATTGCCTATTTGAGTATTTTGAATTTCCTTTCATTTGAATTGAAGATCAAAAGAACTATCACTTCCTGTTTGTATGGTAGAATTGTTTTAAACTTTACATATAATCGTAGAGGTATCGTGTGTGGATAGAAGCTGCATCGTAGCAGTATGTGGCTAAACCTATTGTCTCTTAAAAAACCTTTTTTGGATAAGGAACTATTTGATTAAAAGCATGAACTTTTTTGTATTCTTCAGTCGTGAGTTTGCTTGTCCTGTATTTTATGGAGAGTTATTTGTGATGCTATGAGCTCCTTGGAAAATTTGACTTTGTTCTATGAAAACAATAATTTTGATATGCCATGAACATGGCATTCATGATATATCCTTCCATCACCCCAAGTATTTTTGAACTTTGATTTTAATATCTCAGATTCCAGCAACATTAAAGATGGAGAAAATGTGCAATCCATTCCTCCGTACATCAAGTATCGAAATTCGGCAGTCGTTAAACGTTCAAAATACAGCGGATGATGCAGAGGTGTTGGGTATCATTCGCAGAGCCAAGGATAATTTTTAGTCACCCCCTACAAAACCTCAAAAGAAGAGGGGGGTGGGAAAGTTCATTTTGGTGTATAGGATGATGATAGGTTAGCCATATGCATGTGTAAAATAAGTTAACCGAGATCTTTGTATCGATGATTTCCTACAAGTTCCATTATCAGTTCAGTTCTTAATTTTAAAATTTGCACCTCTCCTGCCACGAGAATTCAATCTTTTTTCTTTTCCCTCTTTTGAAATGAAGAGTGCAATCATTTGATCCCTGATGTATATTCATTATTACTATTGTTATATAATTATTTGATTTCATT ATGATGGTTGGAAGCGTATGTGTCTGGCCGAGCATGAAACAGCTTTCTTTTAGAAAAGACCTTTTGTATGGGGTTATGAGACTCTTATCTATACCATTGAAAACATTGCGTGGAGCTAGTCGTTCACTTAAAGTTGCTCAGTTCTGCAGTGTCGTCAATATGTCTTCCACATTGCAAATTGAACTGGTGATTGGCTCTGGAATAGATAGCGACAGAATTCCTGGAATTGACATAGCTTTAAAAGATGGAGACAAGTGGATGTTTGCTGGGCATGAAGTGCAAGTAATGGAAACTCCTGGTCATACTCGAGGTCATATTAGCTTCTACTTTCCTGGATCCGCTGCAATATTTACTGGAGATACTTTATTCAGCTTATCTTGTGGCAAGCTTTTTGAAGGAACTCCTGAACAGATGCTATCTTCCCTTAAAAAGATCACTTCTTTGCCAGATGATACCAACATATTTTGCGGTCATGAATATACTCTGAGTAACTCTAAGTTCGCTATGTCCATTGAACCTAAGAACGAGGCTCTCAAATCTTATGCATCCCAGGTTGCCAATCTACGAAGCAAGGGCTTGCCAACGATTCCAGCAACATTAAAGATGGAGAAAATGTGCAATCCATTCCTCCGTACATCAAGTATCGAAATTCGGCAGTCGTTAAACGTTCAAAATACAGCGGATGATGCAGAGGTGTTGGGTATCATTCGCAGAGCCAAGGATAATTTTTAGTCACCCCCTACAAAACCTCAAAAGAAGAGGGGGGTGGGAAAGTTCATTTTGGTGTATAGGATGATGATAGGTTAGCCATATGCATGTGTAAAATAAGTTAACCGAGATCTTTGTATCGATGATTTCCTACAAGTTCCATTATCAGTTCAGTTCTTAATTTTAAAATTTGCACCTCTCCTGCCACGAGAATTCAATCTTTTTTCTTTTCCCTCTTTTGAAATGAAGAGTGCAATCATTTGATCCCTGATGTATATTCATTATTACTATTGTTATATAATTATTTGATTTCATT ATGATGGTTGGAAGCGTATGTGTCTGGCCGAGCATGAAACAGCTTTCTTTTAGAAAAGACCTTTTGTATGGGGTTATGAGACTCTTATCTATACCATTGAAAACATTGCGTGGAGCTAGTCGTTCACTTAAAGTTGCTCAGTTCTGCAGTGTCGTCAATATGTCTTCCACATTGCAAATTGAACTGGTGATTGGCTCTGGAATAGATAGCGACAGAATTCCTGGAATTGACATAGCTTTAAAAGATGGAGACAAGTGGATGTTTGCTGGGCATGAAGTGCAAGTAATGGAAACTCCTGGTCATACTCGAGGTCATATTAGCTTCTACTTTCCTGGATCCGCTGCAATATTTACTGGAGATACTTTATTCAGCTTATCTTGTGGCAAGCTTTTTGAAGGAACTCCTGAACAGATGCTATCTTCCCTTAAAAAGATCACTTCTTTGCCAGATGATACCAACATATTTTGCGGTCATGAATATACTCTGAGTAACTCTAAGTTCGCTATGTCCATTGAACCTAAGAACGAGGCTCTCAAATCTTATGCATCCCAGGTTGCCAATCTACGAAGCAAGGGCTTGCCAACGATTCCAGCAACATTAAAGATGGAGAAAATGTGCAATCCATTCCTCCGTACATCAAGTATCGAAATTCGGCAGTCGTTAAACGTTCAAAATACAGCGGATGATGCAGAGGTGTTGGGTATCATTCGCAGAGCCAAGGATAATTTTTAG MMVGSVCVWPSMKQLSFRKDLLYGVMRLLSIPLKTLRGASRSLKVAQFCSVVNMSSTLQIELVIGSGIDSDRIPGIDIALKDGDKWMFAGHEVQVMETPGHTRGHISFYFPGSAAIFTGDTLFSLSCGKLFEGTPEQMLSSLKKITSLPDDTNIFCGHEYTLSNSKFAMSIEPKNEALKSYASQVANLRSKGLPTIPATLKMEKMCNPFLRTSSIEIRQSLNVQNTADDAEVLGIIRRAKDNF Homology
BLAST of Cp4.1LG03g13260 vs. ExPASy Swiss-Prot
Match: Q8LDW8 (Probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLX2-4 PE=2 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.5e-90 Identity = 173/310 (55.81%), Postives = 207/310 (66.77%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy Swiss-Prot
Match: Q9SID3 (Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g31350 PE=1 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.2e-87 Identity = 170/302 (56.29%), Postives = 207/302 (68.54%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy Swiss-Prot
Match: O24495 (Hydroxyacylglutathione hydrolase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GLX2-1 PE=2 SV=2) HSP 1 Score: 321.2 bits (822), Expect = 9.8e-87 Identity = 165/308 (53.57%), Postives = 204/308 (66.23%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy Swiss-Prot
Match: A6WXE0 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / JCM 21032 / NBRC 15819 / NCTC 12168) OX=439375 GN=gloB PE=3 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.9e-46 Identity = 88/181 (48.62%), Postives = 125/181 (69.06%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy Swiss-Prot
Match: Q5LNN5 (Hydroxyacylglutathione hydrolase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=gloB PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.4e-45 Identity = 86/181 (47.51%), Postives = 127/181 (70.17%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. NCBI nr
Match: XP_023528264.1 (probable hydroxyacylglutathione hydrolase 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528265.1 probable hydroxyacylglutathione hydrolase 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 448 bits (1153), Expect = 6.50e-157 Identity = 241/309 (77.99%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. NCBI nr
Match: XP_022980059.1 (probable hydroxyacylglutathione hydrolase 2, chloroplastic [Cucurbita maxima]) HSP 1 Score: 447 bits (1150), Expect = 1.86e-156 Identity = 240/309 (77.67%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. NCBI nr
Match: XP_022956058.1 (probable hydroxyacylglutathione hydrolase 2, chloroplastic [Cucurbita moschata]) HSP 1 Score: 446 bits (1147), Expect = 5.32e-156 Identity = 239/309 (77.35%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. NCBI nr
Match: KAG6581991.1 (putative hydroxyacylglutathione hydrolase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 445 bits (1145), Expect = 1.07e-155 Identity = 238/309 (77.02%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. NCBI nr
Match: KAG7018412.1 (putative hydroxyacylglutathione hydrolase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 446 bits (1148), Expect = 5.98e-155 Identity = 239/310 (77.10%), Postives = 242/310 (78.06%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy TrEMBL
Match: A0A6J1IYA2 (probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479575 PE=3 SV=1) HSP 1 Score: 447 bits (1150), Expect = 9.00e-157 Identity = 240/309 (77.67%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy TrEMBL
Match: A0A6J1GVR0 (probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457866 PE=3 SV=1) HSP 1 Score: 446 bits (1147), Expect = 2.58e-156 Identity = 239/309 (77.35%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy TrEMBL
Match: A0A1S3BZ30 (probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494619 PE=3 SV=1) HSP 1 Score: 426 bits (1096), Expect = 1.50e-148 Identity = 228/309 (73.79%), Postives = 235/309 (76.05%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy TrEMBL
Match: A0A0A0KYR2 (Lactamase_B domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G009870 PE=3 SV=1) HSP 1 Score: 420 bits (1080), Expect = 4.08e-146 Identity = 225/309 (72.82%), Postives = 231/309 (74.76%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. ExPASy TrEMBL
Match: A0A6J1I7H0 (probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470704 PE=3 SV=1) HSP 1 Score: 418 bits (1075), Expect = 2.35e-145 Identity = 224/309 (72.49%), Postives = 231/309 (74.76%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. TAIR 10
Match: AT1G06130.1 (glyoxalase 2-4 ) HSP 1 Score: 334.0 bits (855), Expect = 1.0e-91 Identity = 173/310 (55.81%), Postives = 207/310 (66.77%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. TAIR 10
Match: AT1G06130.2 (glyoxalase 2-4 ) HSP 1 Score: 334.0 bits (855), Expect = 1.0e-91 Identity = 173/310 (55.81%), Postives = 207/310 (66.77%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. TAIR 10
Match: AT2G31350.2 (glyoxalase 2-5 ) HSP 1 Score: 324.3 bits (830), Expect = 8.2e-89 Identity = 170/302 (56.29%), Postives = 207/302 (68.54%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. TAIR 10
Match: AT2G31350.1 (glyoxalase 2-5 ) HSP 1 Score: 324.3 bits (830), Expect = 8.2e-89 Identity = 170/302 (56.29%), Postives = 207/302 (68.54%), Query Frame = 0
BLAST of Cp4.1LG03g13260 vs. TAIR 10
Match: AT2G43430.2 (glyoxalase 2-1 ) HSP 1 Score: 321.2 bits (822), Expect = 7.0e-88 Identity = 165/308 (53.57%), Postives = 204/308 (66.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|