Cp4.1LG03g13120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g13120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Phytoene dehydrogenase
Location	Cp4.1LG03: 9826395 .. 9836518 (+)
RNA-Seq Expression	Cp4.1LG03g13120
Synteny	Cp4.1LG03g13120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAAGTAAGGAACAAGAATATTCTGTAAGGCAAGCAAAAGGCATTTAGTTGGGAAACGGCCAAACGGCCTTTCCTCGCAATGGAAGATAAGAGGCGAAAACGGAAACCGCCCAATTTCAGTATGTGAAAGAAACTGTGTTAGAAACTGCTTTGCACACATCTCCCACTACGACTACGTCTCTTCCAATTCCATTTCCAGTGCTTGCGTACTCTACTCCTAATCTACCTCTTTCTCCGCAGGTAAGTGAGGAATTCTTCGTGGGTTTTCGTCATACCCCTTTTCTTTTTTCTTCTCCGTTTCAATTTCTTAGTTTTCTTTCAATAATTCATCCACTCTGTTCGTAGAATTGAAGGGATCGTTGTGTTTTCATTATAATTTAGAATCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGGGGTATACTGTTTATGTGCTTCTTTGTGTTTTTGGAGTTCGTATTCAAGCCTTACGCTGAGGAACAAGGCAACTCTGTAAGCCTACAAGTGATTTCTGATCGTAATTCTTGGTTTAATTTCATCCACCGAAGTACTGAAATTCTGGGTCTTCGGTGTATGATTAATTTGGTGGAAGAATTGATTGTTGTGTTCTGAGCTAAGATTTAGTGTAGGGAGTAGGGCTTTGGTGAAATGTCACTATGTGGGTCTGTCTCTGCTCTGAACTTGAGGTGGGAAAAGGGTATCACAAAATCAACCACCAGATGCTGTTCTCCCTCAAGTTGTGAGAAAAGCAATGGTTTAGCATTTTGGGGTAGTGAGTTTGTGGGTGAGGGCTTGAAAGTTTCTGGCAGATATGTTAATAGGAAACTATCTAAGGGAACTCTACAACTAAAGGTTTGTCCTCGACTATTTCGTTTCTCGTGTTGTTGTTGGAATGGAATTAGTTACTGTTAGCTTGTTTTTTTTCGTGAACAGATCGTTTGCGTGGATTACCCTAGACCACAGATAGATGATACTGCTAATTTCCTTGAAGCAGCGTCGTTATCTGCTAGCTTTCGTGCTTCTGCACGCCCCAGTAAACCGTTGAAAATTGTGATTGCTGGTGCAGGTCAGGAACTCTCCATGCCTAGTTTGATAGCAAAATGTGTTCTCTTTTCTTTATATGTAATGGTATAATCATGTTTTTAAACTCTATAGGATTGGCTGGTTTATCGACAGCAAAATATTTGGCCGATGCCGGCCACAAACCTGTTTTACTAGAAGCTCGAGATGTTTTAGGTGGGAAGGTATGCTTGCTGGAAGTAATATTGTTTGCTTATTAACTCTTTTACAGACTATCTATTTTGCCATAAATTGTCTACTTCCTAACCCCTCCCCTACGTCGTTGTACTTATAAGTTACAACGGTCGTGTGAGGTCATTCCATGCACGAATTACGATTACCCCAATTGTACCTTTTTCTTTTCCTTCTAAGTAGACTTGGAGTTCAGTGTGTCTATCATTTTGAGATGCAAGGACTCATTTTGAGATGCAAAGTGGAGGTCAAGGTGGTTTGTACAGGCCTATGAGCATGCTGTAGTTGGGAACCATCTTTATGTAATTTATTTAATATATATTTTGACAGCCATACTATCTCTTTATCCTATTCCTACCCCTGTTTCGCTCCTTTTATCAAATCTAAACAAGTTTGTTGTTCTTAAGTTTCAAAAATGAAAAAAAAGGGTTATATTGTTATATATCATGACAATATTCTATTCAAATTTATCATTGAGGCAGTTCTACAGATTTTATTGTAAGAATCTGAGATCACACATCGGTTGGGGAGGAGAACGAAACACCCTTTAAAAGGGTGTGTAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGAGAAAGCCCAAAGAAGACAATATCTGCTAGCGGTAGGCTTGGGCTGTTACAAATGGTATCAGAGCCAAACACTGGGCGATGTGTCAGCGAGGACTTTGGGTCTTGAAGGGGGGTGGATACCAAACGGTGTGCCAGCGAGGACACTGGGCCTCGAAGGGGGGTGGATTGTGAAATCTCCCATCGATTGGAAAGAGAAACGAGTGCCAACGAGGATGCTGGGCCGAGGAGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGAGAGTGGATTGTGAGGTCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGTTGTAGAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAAGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGGCAATATTTGTTAGCGGTGGGCTTGGGCCGTTACAAACAATAACTTTTAAACCATACTTGGTTGTTTTCATAGGTCGTAAGGAATTATGATTTTTCCTATTAAATTTTGTTCACTCTTTCTTCGTAGGTAGCTGCTTGGAAAGATAACGACGGAGACTGGTACGAGACTGGCCTGCACATATTTTGTAAGTATTATCCAGATAATCAATATTTCTAGTGCTATGATCAGTTGATGTTAGAAACTAGCCTTGTTTTCTTTTGATTCCCGAACTATTCTTATAGTTCAGTTTGGTTTTCAAAACCTTTTTTCTACCATCATCAAAACTGTTGCATGACGAAGCTTCCTAGTCCTTTCTTTTTTGAAGAGCTCAGATATGAGGTTAGCCTTCGATCATTATGTTTGATAATCTGTAGTATTCTCCACATGTATGTAAATGAATATATTACCATAATTGCCATTTCTATTTCTAAAACTGTCTTGTACCTGATAAAAAACTAATGTCAATGATACAACCGGAAATTTTCCTATTCAAAGAAGTTATACATCCAGCTATTTATAGACCTTTAGATATGTTATATCTCGTTTGCATGAGATGCTAATTTCTGACCTTTTCTTTGTTTATTCTTGCTTAAAAGTTGGGGCTTATCCCAATGTGCAGAACTTGTTTGGAGAGCTTGGAATCAATGACCGATTGCAGTGGAAGGAACATTCAATGATATTTGCTATGCCAAACAAGCCGGGGGAGTTCAGTCGATTTGATTTCCCTGATGTACTTCCTGCACCCATAAATGGTAAGACTGCACACATTGTACGAATGTGCTGAAATAAGCTTTATGCCGCTGAGAGGGTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAACATTTTTTATAAAGGTGTGAAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAGGTAAACCCCGAAAGGGAAAATCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGGATGATGTGTCAACGAGGACGTTGAGCCCTGAAGGGGGTGGACATCGGGCAGTGTGCCAACAAGGAAGTTAGGCACCGAAGGGGGGGTGTATTGTGAGATCTCACATCAATTGGAGAGAGGAACGAGTGTCAGTGAGGACGCTGGGTCTAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAACGAATCATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCCCAAAGAGGACTAATCATGATTTGCAATGATGAAACTTCTTATAACATGTACTGTAGCGTGGTTCACTCAGCTAGCTAGTTGGTCTGTTGGAACTATTTTTAGATTTGTTTGATAATTTACCTCACAAAGTTCTTGAATAAGTATATGCCTTAGAGCTATAATGGTTACTTGGGGTCGTTTTGCGAAATTCCTTCTCTCTCTTTGACAATGAATGTCATATCATCTTGTGCTGAATTGATGTAACGCCCTGTGCGTTCTGAATGTGAGTCGCACAGTCTGCCGATGAAGCTGGTTGTATGCATTTCTTTATTTGATAAATCATCATTTTGTTTCCTTTGGTCTCTGGAAATATTTTATGTTACCAGTAATTCAGGTTTCCTAAAACTTTGAGAATTGATGACAGGGATATGGGCCATTTTAAGGAACAACGAGATGCTTACTTGGCCAGAGAAAATTAAATTTGCGATTGGGCTCCTGCCGGCAATGCTTGGTGGGCAATCATATGTTGAGGCTCAAGATAATTTAACTGTGCAAGAGTGGATGAGAAGTCGGGTATGATTAGCATGCCATACTATTTTATTGAATCTCTGAGCAGCACACACTGAAAGAAACTTTCAGATTCTAGGTGATACAATTGCCAATGGGAATCTCCAAAAGCTGAATTTTAGATTATGGTAGCTAGCTTCCCTCGAGGTTTTAAAACGCGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGGATGCTTCGTTCTCCTCCCCAACCAATGTGAGATCTCACAATCCACCTCTTTCGGGGCTCAGCGTCCTCGTTCACACTCGTTCCCTTCTCCAATTGATGTGGGACCCCCAATCTACCCCCCTTCGGGGCTCAGCCTCCTTGCTGGCACATCGCCCGGTGTCTGGCTCTGATACCATTTGTAGCAGCCCAAGCCCACTGCCAGTAGATATTGTCATTTTTTAACATTCCCTTCTGGGCTTCCCCTCGAGGTTTTAAAATGCGTTTGCTAGAGAGAGGTTTCCACACTCTTATAAACGATGCTTCATTCTCCTCCCCAACCGATATGGGATCTTACACTTATGCTTAATGAACAAGTACTCCGGTCTCCATGACCTCATTACACGTGATAGATTATGAAGAGAAAATTGCAAACAAGGGTTCTGATAATGTCGATTTTACAGTGGGATAAAGTTCAAAGATAGAATCTAGCTTTAGATCTTTCCATCATCAACAAAAACAGGGCGCCAGAAGTGAATTAGGCTGTTGACCAAAATTTACAAATATAGCCAGAAAAATATTGCGGGAGAAAACTTTTCATTTGTTAGCTATTTAGAGTATTTACTAACTGTGTTGACATTTATTTTTTCTGTTTTCCAGGGAGTACCTGATCGTGTAACAACTGAGGTGTTTATTGCCATGTCAAAGGCTCTAAACTTCATTAACCCCGATGAACTTTCTATGCAATGCATTTTGATTGCTTTGAATCGATTTCTTCAGGTATGATTAGTTCTTTGCGCAATAAGACTATTGAATTGATTTCTTTTGATAGCTTTATGGAATTGGTTCTCTTTAATGCTCTTCATTGGTGTAAATGATCACACCTTTACTGGTATAAATTTTCACTCCCTTATCAAGTTTTTGAACGATGTAATGAAAAGAGACTAATACTCAAAGATATAAACTCGAGNTTCTTCATCTTCTTCTTCTCATAAATCAAAAAAAAAAAATTAAAAAAAGGAAATATAAAGGCACTCCAGTGAAAACCCCATGAACAGCTTGAATAGGAATGCCAAGACGAAGCCTTCAGATGAGCTAATTCGAAACCTTCATATGCTTCTTTGGTGCGAACTTTATCAATTAATCACATGAATTAGATAAATGGATGATCTAAACAGTTCAATTATTTCAGTTTCCGCTCCCTCTACGACGTTTTGTCGTACCGTTATGTATTTTTCCTAACTATTTGGTTTCAAAACAAATTTGATGAATTAGTTAGTATCTTAATACCTCTACAACTGTTTCAGTAGTGCTCATGCTGGCTGTCATTGAAATCGTGGCAACTCGTCGAGAATTGAATTGTGAATTTTACTTATGATCTGAGCCTCACTAATTCTCTTACTTGTAACTCCTGCAGGAGAAGCATGGCTCAAAGATGGCTTTCTTAGATGGAAATCCACCTGAGAGACTTTGTGAGCCGATTGTCGAGCATATTCAGTCATTGGGTGGTGAAGTACGGCTTAATTCAAGGATACAAAAAATTGAGTTAAACAATGATGGAACAGTGAAGAGGTTCTTGTTAAACGATGGGAGTGTCATTGAAGGAGATGCTTATGTATTTGCCACTCCTGGTAAGTAACATAATATTTGGTGAAATCTTATATGCATAATTATATTATATCTTTTCATTTCACTTAAAATGATATGCATCTATCCTGCGCAGTCGATATCCTGAAGCTTCTTCTACCTAATGACTGGAAAGAGATCCCGTACTTCAAAAAGCTGGACAAATTAGTTGGAGTTCCAGTTATCAATGTCCACATATGGTAGGATATGCTAGATCATGACTCGAATGACTACGAAAAATCTAAATGGACTAGCTTTCCAAGATTATTATGACATCTGATCTTGTACAGTAAGCTCTCCCACCGCCACCAGCGGAAGCAAGCTAGTTCCCTATGTTGATTGCCCATGCTCAAGTCTCGAACAGTTCCAAGTTCGTTAAGGAATTTGAGTTCGTTAAAGATTTATAAGATGACGAGAGCTTTAACTGGGATGCCCTAATCGTTCTCCGTGGCGATTAATTTATGAGTGTTAAGATATATAAACATGGGACATGTGCTTTTATATTATCAGTAATTTGGTGATATTGTTTTTCTTTGCAGGTTTGACCGGAAACTGAAGAATACATATGATCACTTACTTTTTAGCAGGTTCTTTGTTTATTAAGATTACATGAAATCAGATACTTCTATTGGTTTTACACTTGAAACTAAGTATATTCTATTTCATTACCTGAATGCAGGAGTCCGCTTCTTAGTGTTTATGCTGACATGTCGGTTACATGTAAGGTATGGTTGCAACTATGTAAATACTTGCAGATTATTTTTGTCATTCAAGCAAGATATATGCTATTCCTTTATTCTATGCATATCAATATATCGGTTTTCGATAGTTCGGTTCAGGTTAGATATTTCCCTTACTTTCATCTTTTGATAAAGGAATTACAAAAAGTTATCAAATTTGGTTTGTGCTGTAAGAACCTTTTTTTAAAACAAGAAACAGCTTCCCATTGATAAAAAATGGAAAGGAAAAAGCTCTAACTCTAAAGCACACTTAGTGTGAGATCCTACGTCAGTAGGCGAGGAGAACGAAAGGAAAGCCTAAAAAAAACAATATTTACTAGCGGATGTGTTGGGCACTGGGCGATGTGCCAACGAGGACACTAAGCTCTGAAGGAGGGTGGACATCGGGCGGTGTGCCAGTAAGGATATTAGGCCCTGAAGCGGGGTGGATTGTGAGATCTCACGTCGATTGGAGAGGGGAACGAGTGCCAGCGAGGATGCGTGGCCCTGAAGGGGAGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCAGATGCGTTTTAAAATCTTGAGGGGAAGCCCGGAAGGGAAAGCCCGGAAGGGAAAGCCCAAAGAGAACAATATCTGCTAGCGGTGGGCTTGGACCATTACACTAAAACAACAACCACAACAGTTGATCAACTTGTTTAGATCAACTTGTTGCTGATTCCTTTCTAATTGACCGCATCTTTCGGAGCTTTTTCTATCCTCGCCTCTGGCAGTTTAGTATTCTCAGCGGTAATATTCCCTTTGCTTTTCTGATACAGGAATATTACAACCCAAACCAGTCCATGTTGGAACTAGTCTTTGCACCTGCAGAAGAGTGGATTTCCCGGAGCGACTCGGAAATTATTGATGCCACAATGATGGAACTAGCTAAACTATTTCCTGATGAAATTTCTGCTGATCAGAGCAAAGCTAAGATTATGAAGTACCACGTTGTTAAAACCCCAAGGTAAACATAGAATCAGTAACTTAAGAGTCTGTTTAGTCTTTTCTAGAATAAATTCGATATATTTATGACTCCTTAATTTGATATTGGTTACAGGTCTGTTTATAAGACTGTTCCCGACTGTGAACCCTGTCGCCCCTTACAACGATCTCCTATCGAGGGATTTTATTTAGCTGGTGACTACACGAAACAGAAGTATTTAGCTTCCATGGAAGGTGCTGTTCTTTCGGGAAAGTTTTGCGCACAGGCTATTGTGAAGGTAATTTCCCTGATCACCTTGTTATATAGGGAAACGTACACGTAAATGTAGGATACGTATACTTGATGTTAGTTTTACCTGCATTGTTGAAGCTTAGGAAGATGAATACGTGTATGGTCGAATTACTACGTAGACAAATGAACTTACCTTCCATTGGGAAAGACGTACCTCCTAAACATCCGAATCGTGTGTCCTTTCCCTAGAGTGTATTTTCTAGCCATTTTAGCTACAAGTGTTCATACTCAAGGTAGAATTCGGAAAAGAAATCCTTCCATTATTTGTGTTGTAAGGATGTGGAAAGTCTGAAAGTTTATAGATTTTTGGCTGCAATATCTATCGTCAAAAGGACATTGTGGACTGTTTTGGAAGTGTTTTCAGGTTTGGTGGGTCAAAGACAAAGCGCTTATAACTACGAAAGGACGTTGAACCTTGTCATCACTAGCCTGATAGGGTCAAGTTCAATAATTGTATCCGTCCATTGTATATTTATTTTAGTAAAATGATTTATATATTTTAGGAATAAAAATATCTAGATATTTTAAGAAAATGATCTTGGTATTTTATACCTAGTTATTGGAAAAAGATATAGATATCTTAGGAACAGATTGACTGACCCCTCCACCCTACTTAGGTTTTCATCTCAAGAAATACAAAGCACATAGTGCAGTAGTTTCTACAGAGTGTCTTGTAATCTCTTCTCAATTGGTGTTAATAAAAAGTGTGAGTGTTTCCCACAAAGAGTTATGTTCAACAATCTGGTATCAAAGTCATACCCTTAATTTAGTTATGTCAATAGAATCCTCAAATGTCGAACAAATAAGTTGCGAGCCTCAAAGGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAAGGGTGTACTTTGTTCGAGGGCTCCAAAGAAAAAGTCGAGTCTCGATGGAGGGGAGGTTGTTCGAAGGCTCCATAGGCCTCAAGGGAGGCTCTATAATATACTTTGCTCAAAATGAGGATTGTGGAGGATTGTTGGGAGAGGAGTCCCACATCGGCTAATTAAGGGGTTGATCATAGGATTATTAAGTAAGGAATACTATCTCTATTGGTATAACTAAAAGCAAAGTCACGAGAGTTTATGCTTAAAGTGGATAAAATATCATACTATTGTGGAGGGTCGTAGTTCCAAATAGTGGTTACATAGGAAACAAATGATAACTACTAGAATTCTGACCATCTCTTGGTGAATGTACTTAGTACCTGGCCTCTAATCAAAGTGCTACTCTGACTTTTGTAACTATGAAAGTTTTTCTATTATAGTCTCCTTGTAACTCGTGATTATTTTTCATTAACAAGAAGAAAAGGAAGAAAAAAAAATATTGATCATATGCATTCATATCGATGCCATGTATTGCATATTACAGGATTATGAAATGCTAGTAGCTCGAGAGAAAAGACGGGTCGCCGAGGCTGGTGTTCGTTGATAACAACTTCAAGGTAATTTTGGAAGAAGAAGATAAACAATACCAGTAATGTTTTTGCTTTTAGATATGACATTGATTTGCGAGTTTAACATTATGATGTCTATTATGTCTACAAGTTCAACGAGTAAAGCAAATTTTTCCTTATTGACATTTACTTTTCTTTAATGACTGCAAAAAGGACATGGGAAAAACCTTTTCCAACGAGAAAAATAATTGTGAACAATGGTATAAGTAGATCATCGTTGGGAGAGTTTCTGCTAATATAAGGATGTAGTGTCAGTAAAAGCCATAGCCCCGCATTCGTCCTCATCCCGTTCATCGGTCGAGAAGGGTTTCTCAAGGAAAATCATTAACAAACGATGTCGTGATGTGAAAACTCGTCGTGGAATAGATAATGAGAGAAGAGTAGAAACCAAATAATAAAGGTTTGAAAGAGGATTCCTTCTTCACTTTTGCAGTCATTAAAGAAAAGTAAAAGTCAATAAAGAAATCTCTTTGCATTCCTTTATTTTCTTTTTTCAATGGGGATTCTCATCTCTATGTGACAATAAATATGATGATTTTATATTTTTTTTGGGAT

mRNA sequence

ATGAAGAAAAAGTAAGGAACAAGAATATTCTGTAAGGCAAGCAAAAGGCATTTAGTTGGGAAACGGCCAAACGGCCTTTCCTCGCAATGGAAGATAAGAGGCGAAAACGGAAACCGCCCAATTTCAGTATGTGAAAGAAACTGTGTTAGAAACTGCTTTGCACACATCTCCCACTACGACTACGTCTCTTCCAATTCCATTTCCAGTGCTTGCGTACTCTACTCCTAATCTACCTCTTTCTCCGCAGTATAATTTAGAATCGTGGTGGCCGGAGAAGTGGATTTATTGCTCTGGGGTATACTGTTTATGTGCTTCTTTGTGTTTTTGGAGTTCGTACTGAAATTCTGGGTCTTCGGTGTATGATTAATTTGGTGGAAGAATTGATTGTTGTGTTCTGAGCTAAGATTTAGTGTAGGGAGTAGGGCTTTGGTGAAATGTCACTATGTGGGTCTGTCTCTGCTCTGAACTTGAGGTGGGAAAAGGGTATCACAAAATCAACCACCAGATGCTGTTCTCCCTCAAGTTGTGAGAAAAGCAATGGTTTAGCATTTTGGGGTAGTGAGTTTGTGGGTGAGGGCTTGAAAGTTTCTGGCAGATATGTTAATAGGAAACTATCTAAGGGAACTCTACAACTAAAGATCGTTTGCGTGGATTACCCTAGACCACAGATAGATGATACTGCTAATTTCCTTGAAGCAGCGTCGTTATCTGCTAGCTTTCGTGCTTCTGCACGCCCCAGTAAACCGTTGAAAATTGTGATTGCTGGTGCAGGATTGGCTGGTTTATCGACAGCAAAATATTTGGCCGATGCCGGCCACAAACCTGTTTTACTAGAAGCTCGAGATGTTTTAGGTGGGAAGGTAGCTGCTTGGAAAGATAACGACGGAGACTGGTACGAGACTGGCCTGCACATATTTTGGATATGGGCCATTTTAAGGAACAACGAGATGCTTACTTGGCCAGAGAAAATTAAATTTGCGATTGGGCTCCTGCCGGCAATGCTTGGTGGGCAATCATATGTTGAGGCTCAAGATAATTTAACTGTGCAAGAGTGGATGAGAAGTCGGGGAGTACCTGATCGTGTAACAACTGAGGAGAAGCATGGCTCAAAGATGGCTTTCTTAGATGGAAATCCACCTGAGAGACTTTGTGAGCCGATTGTCGAGCATATTCAGTCATTGGGTGGTGAAGTACGGCTTAATTCAAGGATACAAAAAATTGAGTTAAACAATGATGGAACAGTGAAGAGGTTCTTGTTAAACGATGGGAGTGTCATTGAAGGAGATGCTTATGTATTTGCCACTCCTGTCGATATCCTGAAGCTTCTTCTACCTAATGACTGGAAAGAGATCCCGTACTTCAAAAAGCTGGACAAATTAGTTGGAGTTCCAGTTATCAATGTCCACATATGGTTTGACCGGAAACTGAAGAATACATATGATCACTTACTTTTTAGCAGGAGTCCGCTTCTTAGTGTTTATGCTGACATGTCGGTTACATGTAAGGAATATTACAACCCAAACCAGTCCATGTTGGAACTAGTCTTTGCACCTGCAGAAGAGTGGATTTCCCGGAGCGACTCGGAAATTATTGATGCCACAATGATGGAACTAGCTAAACTATTTCCTGATGAAATTTCTGCTGATCAGAGCAAAGCTAAGATTATGAAGTACCACGTTGTTAAAACCCCAAGGTCTGTTTATAAGACTGTTCCCGACTGTGAACCCTGTCGCCCCTTACAACGATCTCCTATCGAGGGATTTTATTTAGCTGGTGACTACACGAAACAGAAGTATTTAGCTTCCATGGAAGGTGCTGTTCTTTCGGGAAAGTTTTGCGCACAGGCTATTGTGAAGGATTATGAAATGCTAGTAGCTCGAGAGAAAAGACGGGTCGCCGAGGCTGGTGTTCGTTGATAACAACTTCAAGGTAATTTTGGAAGAAGAAGATAAACAATACCAGTAATGTTTTTGCTTTTAGATATGACATTGATTTGCGAGTTTAACATTATGATGTCTATTATGTCTACAAGTTCAACGAGTAAAGCAAATTTTTCCTTATTGACATTTACTTTTCTTTAATGACTGCAAAAAGGACATGGGAAAAACCTTTTCCAACGAGAAAAATAATTGTGAACAATGGTATAAGTAGATCATCGTTGGGAGAGTTTCTGCTAATATAAGGATGTAGTGTCAGTAAAAGCCATAGCCCCGCATTCGTCCTCATCCCGTTCATCGGTCGAGAAGGGTTTCTCAAGGAAAATCATTAACAAACGATGTCGTGATGTGAAAACTCGTCGTGGAATAGATAATGAGAGAAGAGTAGAAACCAAATAATAAAGGTTTGAAAGAGGATTCCTTCTTCACTTTTGCAGTCATTAAAGAAAAGTAAAAGTCAATAAAGAAATCTCTTTGCATTCCTTTATTTTCTTTTTTCAATGGGGATTCTCATCTCTATGTGACAATAAATATGATGATTTTATATTTTTTTTGGGAT

Coding sequence (CDS)

ATGTCACTATGTGGGTCTGTCTCTGCTCTGAACTTGAGGTGGGAAAAGGGTATCACAAAATCAACCACCAGATGCTGTTCTCCCTCAAGTTGTGAGAAAAGCAATGGTTTAGCATTTTGGGGTAGTGAGTTTGTGGGTGAGGGCTTGAAAGTTTCTGGCAGATATGTTAATAGGAAACTATCTAAGGGAACTCTACAACTAAAGATCGTTTGCGTGGATTACCCTAGACCACAGATAGATGATACTGCTAATTTCCTTGAAGCAGCGTCGTTATCTGCTAGCTTTCGTGCTTCTGCACGCCCCAGTAAACCGTTGAAAATTGTGATTGCTGGTGCAGGATTGGCTGGTTTATCGACAGCAAAATATTTGGCCGATGCCGGCCACAAACCTGTTTTACTAGAAGCTCGAGATGTTTTAGGTGGGAAGGTAGCTGCTTGGAAAGATAACGACGGAGACTGGTACGAGACTGGCCTGCACATATTTTGGATATGGGCCATTTTAAGGAACAACGAGATGCTTACTTGGCCAGAGAAAATTAAATTTGCGATTGGGCTCCTGCCGGCAATGCTTGGTGGGCAATCATATGTTGAGGCTCAAGATAATTTAACTGTGCAAGAGTGGATGAGAAGTCGGGGAGTACCTGATCGTGTAACAACTGAGGAGAAGCATGGCTCAAAGATGGCTTTCTTAGATGGAAATCCACCTGAGAGACTTTGTGAGCCGATTGTCGAGCATATTCAGTCATTGGGTGGTGAAGTACGGCTTAATTCAAGGATACAAAAAATTGAGTTAAACAATGATGGAACAGTGAAGAGGTTCTTGTTAAACGATGGGAGTGTCATTGAAGGAGATGCTTATGTATTTGCCACTCCTGTCGATATCCTGAAGCTTCTTCTACCTAATGACTGGAAAGAGATCCCGTACTTCAAAAAGCTGGACAAATTAGTTGGAGTTCCAGTTATCAATGTCCACATATGGTTTGACCGGAAACTGAAGAATACATATGATCACTTACTTTTTAGCAGGAGTCCGCTTCTTAGTGTTTATGCTGACATGTCGGTTACATGTAAGGAATATTACAACCCAAACCAGTCCATGTTGGAACTAGTCTTTGCACCTGCAGAAGAGTGGATTTCCCGGAGCGACTCGGAAATTATTGATGCCACAATGATGGAACTAGCTAAACTATTTCCTGATGAAATTTCTGCTGATCAGAGCAAAGCTAAGATTATGAAGTACCACGTTGTTAAAACCCCAAGGTCTGTTTATAAGACTGTTCCCGACTGTGAACCCTGTCGCCCCTTACAACGATCTCCTATCGAGGGATTTTATTTAGCTGGTGACTACACGAAACAGAAGTATTTAGCTTCCATGGAAGGTGCTGTTCTTTCGGGAAAGTTTTGCGCACAGGCTATTGTGAAGGATTATGAAATGCTAGTAGCTCGAGAGAAAAGACGGGTCGCCGAGGCTGGTGTTCGTTGA

Protein sequence

MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKLSKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFWIWAILRNNEMLTWPEKIKFAIGLLPAMLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLFPDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCAQAIVKDYEMLVAREKRRVAEAGVR

Homology

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy Swiss-Prot
Match: P28554 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum OX=4081 GN=PDS PE=1 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 1.5e-214
Identity = 389/584 (66.61%), Postives = 433/584 (74.14%), Query Frame = 0


Query: 1   MSLCGSVSALNLR--------WEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKV- 60
           M   G VSA+NLR        W    +   T   S   C + N L F GSE +G  LK+ 
Sbjct: 1   MPQIGLVSAVNLRVQGSSAYLWSSRSSSLGTE--SRDGCLQRNSLCFAGSESMGHKLKIR 60

Query: 61  SGRYVNRKLSKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAG 120
           +     R+L K    LK+VC+DYPRP++D+T N+LEAA LS++FRAS RP+KPL+IVIAG
Sbjct: 61  TPHATTRRLVKDLGPLKVVCIDYPRPELDNTVNYLEAAFLSSTFRASPRPTKPLEIVIAG 120

Query: 121 AGLAGLSTAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW--------- 180
           AGL GLSTAKYLADAGHKP+LLEARDVLGGKVAAWKD+DGDWYETGLHIF+         
Sbjct: 121 AGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNIQNL 180

Query: 181 -------------------------------------------IWAILRNNEMLTWPEKI 240
                                                      I AIL+NNEMLTWPEK+
Sbjct: 181 FGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFSEALPAPLNGILAILKNNEMLTWPEKV 240

Query: 241 KFAIGLLPAMLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE------------------- 300
           KFAIGLLPAMLGGQSYVEAQD ++V++WMR +GVPDRVT E                   
Sbjct: 241 KFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSM 300

Query: 301 ------------EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDG 360
                       EKHGSKMAFLDGNPPERLC PIVEHI+S GG+VRLNSRI+KIELN DG
Sbjct: 301 QCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDG 360

Query: 361 TVKRFLLNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFD 420
           +VK F+L+DGS IEGDA+VFA PVDI KLLLP DWKEIPYF+KL+KLVGVPVINVHIWFD
Sbjct: 361 SVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFD 420

Query: 421 RKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDA 480
           RKLKNTYDHLLFSRS LLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDA
Sbjct: 421 RKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDA 480

Query: 481 TMMELAKLFPDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGD 493
           TM ELA LFPDEISADQSKAKI+KYHVVKTPRSVYKTVP CEPCRPLQRSPIEGFYLAGD
Sbjct: 481 TMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPIEGFYLAGD 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy Swiss-Prot
Match: P80093 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum OX=4072 GN=PDS PE=1 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 7.3e-214
Identity = 384/581 (66.09%), Postives = 436/581 (75.04%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKG-----ITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRY 60
           M   G VSA+NLR +        ++S+    S   C + N L F GS+ +   LK+   +
Sbjct: 1   MPQIGLVSAVNLRVQGNSAYLWSSRSSLGTDSQDGCSQRNSLCFGGSDSMSHRLKIRNPH 60

Query: 61  -VNRKLSKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGL 120
            + R+L+K    LK+VC+DYPRP++D+T N+LEAA LS+SFR+S RP+KPL+IVIAGAGL
Sbjct: 61  SITRRLAKDFRPLKVVCIDYPRPELDNTVNYLEAAFLSSSFRSSPRPTKPLEIVIAGAGL 120

Query: 121 AGLSTAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------ 180
            GLSTAKYLADAGHKP+LLEARDVLGGKVAAWKD+DGDWYETGLHIF+            
Sbjct: 121 GGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNMQNLFGE 180

Query: 181 ----------------------------------------IWAILRNNEMLTWPEKIKFA 240
                                                   I AIL+NNEMLTWPEK+KFA
Sbjct: 181 LGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEALPAPLNGILAILKNNEMLTWPEKVKFA 240

Query: 241 IGLLPAMLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------- 300
           IGLLPAMLGGQSYVEAQD ++V++WMR +GVPDRVT E                      
Sbjct: 241 IGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCI 300

Query: 301 ---------EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVK 360
                    EKHGSKMAFLDGNPPERLC PIVEHI+S GG+VRLNSRI+KIELN DG+VK
Sbjct: 301 LIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVK 360

Query: 361 RFLLNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKL 420
            F+LNDGS IEGDA+VFATPVDI KLLLP DWKEIPYF+KL+KLVGVPVINVHIWFDRKL
Sbjct: 361 CFILNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKL 420

Query: 421 KNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMM 480
           KNT D+LLFSRSPLLSVYADMSVTCKEYY+PN+SMLELVFAPAEEW+SRSDSEIIDATM 
Sbjct: 421 KNTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELVFAPAEEWVSRSDSEIIDATMK 480

Query: 481 ELAKLFPDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTK 493
           ELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKTVP CEPCR LQRSP+EGFYLAGDYTK
Sbjct: 481 ELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPVEGFYLAGDYTK 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy Swiss-Prot
Match: Q07356 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana OX=3702 GN=PDS PE=1 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 1.9e-209
Identity = 379/578 (65.57%), Postives = 431/578 (74.57%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEF---VGEGLKVSGRYVN 60
           M + G+VSA NL ++ G  ++ +          S G    G  F     + LK   R   
Sbjct: 1   MVVFGNVSAANLPYQNGFLEALS----------SGGCELMGHSFRVPTSQALKTRTR--- 60

Query: 61  RKLSKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGL 120
           R+ + G LQ  +VCVD PRP++++T NFLEAASLSASFR++ RP+KPLK+VIAGAGLAGL
Sbjct: 61  RRSTAGPLQ--VVCVDIPRPELENTVNFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGL 120

Query: 121 STAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW--------------- 180
           STAKYLADAGHKP+LLEARDVLGGK+AAWKD DGDWYETGLHIF+               
Sbjct: 121 STAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGI 180

Query: 181 -------------------------------------IWAILRNNEMLTWPEKIKFAIGL 240
                                                IWAILRNNEMLTWPEKIKFAIGL
Sbjct: 181 NDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGL 240

Query: 241 LPAMLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE------------------------- 300
           LPAM+GGQ+YVEAQD L+V+EWM  +GVP+RVT E                         
Sbjct: 241 LPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIA 300

Query: 301 ------EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFL 360
                 EKHGSKMAFLDGNPPERLC P+V+HI+SLGGEV+LNSRI+KIELN+DGTVK FL
Sbjct: 301 LNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFL 360

Query: 361 LNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT 420
           L +GS +EGDAYVFA PVDILKLLLP+ WKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT
Sbjct: 361 LTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT 420

Query: 421 YDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELA 480
           YDHLLFSRS LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEWISR+DS+IIDATM EL 
Sbjct: 421 YDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELE 480

Query: 481 KLFPDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKY 493
           KLFPDEISADQSKAKI+KYHVVKTPRSVYKT+P+CEPCRPLQRSPIEGFYLAGDYTKQKY
Sbjct: 481 KLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKY 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy Swiss-Prot
Match: P28553 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Glycine max OX=3847 GN=PDS1 PE=2 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 2.4e-209
Identity = 378/575 (65.74%), Postives = 426/575 (74.09%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           M+ CG +SA N  +  G           +S + +   +F GS+ +G  L+ +   +    
Sbjct: 1   MAACGYISAANFNYLVG----ARNISKFASSDATISFSFGGSDSMGLTLRPAP--IRAPK 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
                 L++VCVDYPRP++++T NF+EAA LS++FRAS RP KPL IVIAGAGLAGLSTA
Sbjct: 61  RNHFSPLRVVCVDYPRPELENTVNFVEAAYLSSTFRASPRPLKPLNIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKP+LLEARDVLGGKVAAWKD DGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYPYVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEK+KFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPEKVKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQ YVEAQD L+VQEWM+ +GVP+RV  E                            
Sbjct: 241 MLGGQPYVEAQDGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLC PIV++IQSLGGEV LNSRIQKIELN+DGTVK FLLN+
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNN 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           G V+EGDAYVFATPVDILKLLLP++WK IPYF++LDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYY+PNQSMLELVFAPAEEWISRSD +II ATM ELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDDDIIQATMTELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKI+KYHVVKTPRSVYKTVP+CEPCRP+QRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy Swiss-Prot
Match: Q40406 (15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus OX=39639 GN=PDS1 PE=1 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 3.2e-201
Identity = 357/535 (66.73%), Postives = 399/535 (74.58%), Query Frame = 0


Query: 35  NGLAFWGSEFVGEGLKVS-GRYVNRKLSKGTLQLKIVCVDYPRPQIDDTANFLEAASLSA 94
           N   F  SE +G  L+V    Y   + S     L++VC D PRP+++   NFLEAA LSA
Sbjct: 27  NFQGFRSSECLGIQLQVPVPFYSGIRQSPRATSLQVVCKDCPRPELEGAVNFLEAAQLSA 86

Query: 95  SFRASARPSKPLKIVIAGAGLAGLSTAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDW 154
           SFR+S RP K L++V+ GAGLAGLSTAKYLADAGHKP+LLE+RDVLGGK+AAWKD DGDW
Sbjct: 87  SFRSSPRPEKGLEVVVVGAGLAGLSTAKYLADAGHKPILLESRDVLGGKIAAWKDKDGDW 146

Query: 155 YETGLHIFW--------------------------------------------------- 214
           YETGLHIF+                                                   
Sbjct: 147 YETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLN 206

Query: 215 -IWAILRNNEMLTWPEKIKFAIGLLPAMLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE- 274
            IWAILRNNEMLTWPEK++FAIGLLPAM+GGQ+YVEAQD LTV EWMR +GVPDRV  E 
Sbjct: 207 GIWAILRNNEMLTWPEKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQGVPDRVNDEV 266

Query: 275 ------------------------------EKHGSKMAFLDGNPPERLCEPIVEHIQSLG 334
                                         EKHGSKMAFLDGNPPERLC PIV+HIQSLG
Sbjct: 267 FIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLG 326

Query: 335 GEVRLNSRIQKIELNNDGTVKRFLLNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYFK 394
           G  +LNSR+QKIELN DGTVK F+L +G++I GDAYV A PVDILKLLLP +W+EIPYF+
Sbjct: 327 GRAQLNSRLQKIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEWREIPYFQ 386

Query: 395 KLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELV 454
           KLDKLVGVPVINVHIWFDRKLKNTYDHLLF+RSPLLSVYADMSVTCKEYY+PN+SMLELV
Sbjct: 387 KLDKLVGVPVINVHIWFDRKLKNTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSMLELV 446

Query: 455 FAPAEEWISRSDSEIIDATMMELAKLFPDEISADQSKAKIMKYHVVKTPRSVYKTVPDCE 486
           FAPAEEWISRSDSEII+ TM ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKT+PDCE
Sbjct: 447 FAPAEEWISRSDSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCE 506

[Close]

BLAST of Cp4.1LG03g13120 vs. NCBI nr
Match: XP_023527611.1 (15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita pepo subsp. pepo] >XP_023527612.1 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita pepo subsp. pepo] >XP_023527613.1 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 958 bits (2477), Expect = 0.0
Identity = 492/576 (85.42%), Postives = 493/576 (85.59%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL
Sbjct: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
           SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA
Sbjct: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPDVLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. NCBI nr
Match: XP_022955514.1 (15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita moschata] >XP_022955516.1 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita moschata] >XP_022955517.1 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita moschata])

HSP 1 Score: 946 bits (2444), Expect = 0.0
Identity = 486/576 (84.38%), Postives = 489/576 (84.90%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRWEKGI KSTTRC SPSSC+KSNGLAFWGSEFVGEGLKVSGRYVNRKL
Sbjct: 1   MSLCGSVSALNLRWEKGIPKSTTRCFSPSSCKKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
           S GTLQLK+VCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA
Sbjct: 61  STGTLQLKVVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPDVLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTV RFLLND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVNRFLLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. NCBI nr
Match: AEK86565.1 (chloroplast phytoene desaterase [Cucurbita moschata])

HSP 1 Score: 943 bits (2437), Expect = 0.0
Identity = 484/576 (84.03%), Postives = 489/576 (84.90%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRWEKGI KSTTRCCSPSSCEKSNGLAFWGSEFVG  LKVSGRYVNRKL
Sbjct: 1   MSLCGSVSALNLRWEKGIPKSTTRCCSPSSCEKSNGLAFWGSEFVGGSLKVSGRYVNRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
           SKGTLQLK+VCVDYPRPQIDDTANFLEAA+LSASFRASARPSKPLKIVIAGAGLAGLSTA
Sbjct: 61  SKGTLQLKVVCVDYPRPQIDDTANFLEAATLSASFRASARPSKPLKIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRN+EMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPDLLPAPINGIWAILRNSEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSL GEVRLNSRIQKIELNNDGTVKRFLLND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLDGEVRLNSRIQKIELNNDGTVKRFLLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKIMKYHVVKTPRSVYKTVP+CEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. NCBI nr
Match: XP_022979438.1 (15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita maxima] >XP_022979439.1 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita maxima] >XP_022979440.1 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita maxima])

HSP 1 Score: 942 bits (2435), Expect = 0.0
Identity = 483/576 (83.85%), Postives = 488/576 (84.72%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALN RWEKGI KSTTRCCSPSSCEKSNGLAFWGSEFVG  LKVSGRYVNRKL
Sbjct: 1   MSLCGSVSALNFRWEKGIPKSTTRCCSPSSCEKSNGLAFWGSEFVGGSLKVSGRYVNRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
           SKGTLQLK+VCVDYPRPQIDDTANFLEAA+LSASFRASARPSKPLKIVIAGAGLAGLSTA
Sbjct: 61  SKGTLQLKVVCVDYPRPQIDDTANFLEAATLSASFRASARPSKPLKIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPDLLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSL GEVRLNSRIQKIELNNDGTVKRFLLND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLDGEVRLNSRIQKIELNNDGTVKRFLLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYY+PNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYDPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. NCBI nr
Match: KAA0044540.1 (phytoene dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 909 bits (2349), Expect = 0.0
Identity = 463/576 (80.38%), Postives = 481/576 (83.51%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRWEKGI K T+RCCSP SCEKSNGLAFWGSE VG+GLKVSGR+V+RKL
Sbjct: 1   MSLCGSVSALNLRWEKGIPKVTSRCCSPLSCEKSNGLAFWGSEIVGDGLKVSGRHVSRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
            KG L LKIVCVDYPRPQIDDT NF+EAASLSASFRASARP KPLK+VIAGAGLAGLSTA
Sbjct: 61  YKGALPLKIVCVDYPRPQIDDTVNFIEAASLSASFRASARPRKPLKVVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKD+DGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPEKLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRF LND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFSLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           G+VIEGDAYVFATPVDILKLLLP+DW+ IPYFKKL+KLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GNVIEGDAYVFATPVDILKLLLPDDWRAIPYFKKLEKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDS+IIDATM+ELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSDIIDATMVELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKI+KYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIVKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy TrEMBL
Match: A0A6J1GTV7 (Phytoene dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111457519 PE=3 SV=1)

HSP 1 Score: 946 bits (2444), Expect = 0.0
Identity = 486/576 (84.38%), Postives = 489/576 (84.90%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRWEKGI KSTTRC SPSSC+KSNGLAFWGSEFVGEGLKVSGRYVNRKL
Sbjct: 1   MSLCGSVSALNLRWEKGIPKSTTRCFSPSSCKKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
           S GTLQLK+VCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA
Sbjct: 61  STGTLQLKVVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPDVLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTV RFLLND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVNRFLLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy TrEMBL
Match: G1FQQ8 (Phytoene dehydrogenase OS=Cucurbita moschata OX=3662 GN=PDS PE=2 SV=1)

HSP 1 Score: 943 bits (2437), Expect = 0.0
Identity = 484/576 (84.03%), Postives = 489/576 (84.90%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRWEKGI KSTTRCCSPSSCEKSNGLAFWGSEFVG  LKVSGRYVNRKL
Sbjct: 1   MSLCGSVSALNLRWEKGIPKSTTRCCSPSSCEKSNGLAFWGSEFVGGSLKVSGRYVNRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
           SKGTLQLK+VCVDYPRPQIDDTANFLEAA+LSASFRASARPSKPLKIVIAGAGLAGLSTA
Sbjct: 61  SKGTLQLKVVCVDYPRPQIDDTANFLEAATLSASFRASARPSKPLKIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRN+EMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPDLLPAPINGIWAILRNSEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSL GEVRLNSRIQKIELNNDGTVKRFLLND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLDGEVRLNSRIQKIELNNDGTVKRFLLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKIMKYHVVKTPRSVYKTVP+CEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy TrEMBL
Match: A0A6J1IW75 (Phytoene dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111479159 PE=3 SV=1)

HSP 1 Score: 942 bits (2435), Expect = 0.0
Identity = 483/576 (83.85%), Postives = 488/576 (84.72%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALN RWEKGI KSTTRCCSPSSCEKSNGLAFWGSEFVG  LKVSGRYVNRKL
Sbjct: 1   MSLCGSVSALNFRWEKGIPKSTTRCCSPSSCEKSNGLAFWGSEFVGGSLKVSGRYVNRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
           SKGTLQLK+VCVDYPRPQIDDTANFLEAA+LSASFRASARPSKPLKIVIAGAGLAGLSTA
Sbjct: 61  SKGTLQLKVVCVDYPRPQIDDTANFLEAATLSASFRASARPSKPLKIVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPDLLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSL GEVRLNSRIQKIELNNDGTVKRFLLND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLDGEVRLNSRIQKIELNNDGTVKRFLLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYY+PNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYDPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy TrEMBL
Match: A0A5A7TMX7 (Phytoene dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002880 PE=3 SV=1)

HSP 1 Score: 909 bits (2349), Expect = 0.0
Identity = 463/576 (80.38%), Postives = 481/576 (83.51%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRWEKGI K T+RCCSP SCEKSNGLAFWGSE VG+GLKVSGR+V+RKL
Sbjct: 1   MSLCGSVSALNLRWEKGIPKVTSRCCSPLSCEKSNGLAFWGSEIVGDGLKVSGRHVSRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
            KG L LKIVCVDYPRPQIDDT NF+EAASLSASFRASARP KPLK+VIAGAGLAGLSTA
Sbjct: 61  YKGALPLKIVCVDYPRPQIDDTVNFIEAASLSASFRASARPRKPLKVVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKD+DGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPEKLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRF LND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFSLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           G+VIEGDAYVFATPVDILKLLLP+DW+ IPYFKKL+KLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GNVIEGDAYVFATPVDILKLLLPDDWRAIPYFKKLEKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDS+IIDATM+ELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSDIIDATMVELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKI+KYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIVKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. ExPASy TrEMBL
Match: A0A5D3CYP6 (Phytoene dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001910 PE=3 SV=1)

HSP 1 Score: 906 bits (2342), Expect = 0.0
Identity = 462/576 (80.21%), Postives = 480/576 (83.33%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEFVGEGLKVSGRYVNRKL 60
           MSLCGSVSALNLRW KGI K T+RCCSP SCEKSNGLAFWGSE VG+GLKVSGR+V+RKL
Sbjct: 1   MSLCGSVSALNLRWGKGIPKVTSRCCSPLSCEKSNGLAFWGSEIVGDGLKVSGRHVSRKL 60

Query: 61  SKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGLSTA 120
            KG L LKIVCVDYPRPQIDDT NF+EAASLSASFRASARP KPLK+VIAGAGLAGLSTA
Sbjct: 61  YKGALPLKIVCVDYPRPQIDDTVNFIEAASLSASFRASARPRKPLKVVIAGAGLAGLSTA 120

Query: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW------------------ 180
           KYLADAGHKPVLLEARDVLGGKVAAWKD+DGDWYETGLHIF+                  
Sbjct: 121 KYLADAGHKPVLLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNVQNLFGELGINDR 180

Query: 181 ----------------------------------IWAILRNNEMLTWPEKIKFAIGLLPA 240
                                             IWAILRNNEMLTWPEKIKFAIGLLPA
Sbjct: 181 LQWKEHSMIFAMPNKPGEFSRFDFPEKLPAPINGIWAILRNNEMLTWPEKIKFAIGLLPA 240

Query: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE---------------------------- 300
           MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE                            
Sbjct: 241 MLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 300

Query: 301 ---EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLND 360
              EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRF LND
Sbjct: 301 FLQEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFSLND 360

Query: 361 GSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDH 420
           G+VIEGDAYVFATPVDILKLLLP+DW+ IPYFKKL+KLVGVPVINVHIWFDRKLKNTYDH
Sbjct: 361 GNVIEGDAYVFATPVDILKLLLPDDWRAIPYFKKLEKLVGVPVINVHIWFDRKLKNTYDH 420

Query: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELAKLF 480
           LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDS+IIDATM+ELAKLF
Sbjct: 421 LLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSDIIDATMVELAKLF 480

Query: 481 PDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 493
           PDEISADQSKAKI+KYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
Sbjct: 481 PDEISADQSKAKIVKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS 540

[Close]

BLAST of Cp4.1LG03g13120 vs. TAIR 10
Match: AT4G14210.1 (phytoene desaturase 3 )

HSP 1 Score: 729.9 bits (1883), Expect = 1.3e-210
Identity = 379/578 (65.57%), Postives = 431/578 (74.57%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEF---VGEGLKVSGRYVN 60
           M + G+VSA NL ++ G  ++ +          S G    G  F     + LK   R   
Sbjct: 1   MVVFGNVSAANLPYQNGFLEALS----------SGGCELMGHSFRVPTSQALKTRTR--- 60

Query: 61  RKLSKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGL 120
           R+ + G LQ  +VCVD PRP++++T NFLEAASLSASFR++ RP+KPLK+VIAGAGLAGL
Sbjct: 61  RRSTAGPLQ--VVCVDIPRPELENTVNFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGL 120

Query: 121 STAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW--------------- 180
           STAKYLADAGHKP+LLEARDVLGGK+AAWKD DGDWYETGLHIF+               
Sbjct: 121 STAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGI 180

Query: 181 -------------------------------------IWAILRNNEMLTWPEKIKFAIGL 240
                                                IWAILRNNEMLTWPEKIKFAIGL
Sbjct: 181 NDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGL 240

Query: 241 LPAMLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE------------------------- 300
           LPAM+GGQ+YVEAQD L+V+EWM  +GVP+RVT E                         
Sbjct: 241 LPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIA 300

Query: 301 ------EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFL 360
                 EKHGSKMAFLDGNPPERLC P+V+HI+SLGGEV+LNSRI+KIELN+DGTVK FL
Sbjct: 301 LNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFL 360

Query: 361 LNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT 420
           L +GS +EGDAYVFA PVDILKLLLP+ WKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT
Sbjct: 361 LTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT 420

Query: 421 YDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELA 480
           YDHLLFSRS LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEWISR+DS+IIDATM EL 
Sbjct: 421 YDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELE 480

Query: 481 KLFPDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKY 493
           KLFPDEISADQSKAKI+KYHVVKTPRSVYKT+P+CEPCRPLQRSPIEGFYLAGDYTKQKY
Sbjct: 481 KLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKY 540

[Close]

BLAST of Cp4.1LG03g13120 vs. TAIR 10
Match: AT4G14210.2 (phytoene desaturase 3 )

HSP 1 Score: 727.2 bits (1876), Expect = 8.5e-210
Identity = 377/578 (65.22%), Postives = 430/578 (74.39%), Query Frame = 0


Query: 1   MSLCGSVSALNLRWEKGITKSTTRCCSPSSCEKSNGLAFWGSEF---VGEGLKVSGRYVN 60
           M + G+VSA NL ++ G  ++ +          S G    G  F     + LK   R   
Sbjct: 1   MVVFGNVSAANLPYQNGFLEALS----------SGGCELMGHSFRVPTSQALKTRTR--- 60

Query: 61  RKLSKGTLQLKIVCVDYPRPQIDDTANFLEAASLSASFRASARPSKPLKIVIAGAGLAGL 120
           R+ + G LQ  +VCVD PRP++++T NFLEAASLSASFR++ RP+KPLK+VIAGAGLAGL
Sbjct: 61  RRSTAGPLQ--VVCVDIPRPELENTVNFLEAASLSASFRSAPRPAKPLKVVIAGAGLAGL 120

Query: 121 STAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW--------------- 180
           STAKYLADAGHKP+LLEARDVLGGK+AAWKD DGDWYETGLHIF+               
Sbjct: 121 STAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGI 180

Query: 181 -------------------------------------IWAILRNNEMLTWPEKIKFAIGL 240
                                                IWAILRNNEMLTWPEKIKFAIGL
Sbjct: 181 NDRLQWKEHSMIFAMPSKPGEFSRFDFPDVLPAPLNGIWAILRNNEMLTWPEKIKFAIGL 240

Query: 241 LPAMLGGQSYVEAQDNLTVQEWMRSRGVPDRVTTE------------------------- 300
           LPAM+GGQ+YVEAQD L+V+EWM  + +P+RVT E                         
Sbjct: 241 LPAMVGGQAYVEAQDGLSVKEWMEKQAIPERVTDEVFIAMSKALNFINPDELSMQCILIA 300

Query: 301 ------EKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFL 360
                 EKHGSKMAFLDGNPPERLC P+V+HI+SLGGEV+LNSRI+KIELN+DGTVK FL
Sbjct: 301 LNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFL 360

Query: 361 LNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT 420
           L +GS +EGDAYVFA PVDILKLLLP+ WKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT
Sbjct: 361 LTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNT 420

Query: 421 YDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDSEIIDATMMELA 480
           YDHLLFSRS LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEWISR+DS+IIDATM EL 
Sbjct: 421 YDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDATMKELE 480

Query: 481 KLFPDEISADQSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKY 493
           KLFPDEISADQSKAKI+KYHVVKTPRSVYKT+P+CEPCRPLQRSPIEGFYLAGDYTKQKY
Sbjct: 481 KLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKY 540

[Close]

BLAST of Cp4.1LG03g13120 vs. TAIR 10
Match: AT3G04870.1 (zeta-carotene desaturase )

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-39
Identity = 127/497 (25.55%), Postives = 216/497 (43.46%), Query Frame = 0


Query: 105 LKIVIAGAGLAGLSTAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW-- 164
           LK+ I GAGLAG+STA  L D GH+  + ++R  +GGKV ++ D  G+  E GLH+F+  
Sbjct: 57  LKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGC 116

Query: 165 ------------------------------------------------IWAILRNNEMLT 224
                                                           I A L  N++  
Sbjct: 117 YNNLFRLMKKVGAEKNLLVKDHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKP 176

Query: 225 WPE-KIKFAIGLLPAML------GGQSYVEAQDNLTVQEWMRSRG--------VPDRVT- 284
           + + +   A+ L P +       G    +   D+++  +W  S+G        + D V  
Sbjct: 177 YDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAY 236

Query: 285 ----------------------TEEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLN 344
                                   +   S +  L G+P   L  PI ++I   GG + L 
Sbjct: 237 ALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLR 296

Query: 345 SRIQKIELNNDGTVKRFL-------LNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYF 404
              ++I  +     + ++         +  +++ D YV A  V  +K LLP +W+E  +F
Sbjct: 297 WGCREILYDKSADGETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFF 356

Query: 405 KKLDKLVGVPVINVHIWFD------------RKLKNT--YDHLLFSRSPLLSVYADMSVT 464
             + +L GVPV+ V + ++            R+LK     D+LL++     S +AD+++ 
Sbjct: 357 NDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALA 416

Query: 465 C-KEYYNPNQ-SMLELVFAPAEEWISRSDSEIIDATMMELAKLFPDEISADQSKAKIMKY 491
              +YY   Q ++L+ V  P + ++   + +II+   M++ +LFP     + + +     
Sbjct: 417 SPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSS---- 476

[Close]

BLAST of Cp4.1LG03g13120 vs. TAIR 10
Match: AT3G04870.2 (zeta-carotene desaturase )

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-39
Identity = 127/497 (25.55%), Postives = 216/497 (43.46%), Query Frame = 0


Query: 105 LKIVIAGAGLAGLSTAKYLADAGHKPVLLEARDVLGGKVAAWKDNDGDWYETGLHIFW-- 164
           LK+ I GAGLAG+STA  L D GH+  + ++R  +GGKV ++ D  G+  E GLH+F+  
Sbjct: 57  LKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGC 116

Query: 165 ------------------------------------------------IWAILRNNEMLT 224
                                                           I A L  N++  
Sbjct: 117 YNNLFRLMKKVGAEKNLLVKDHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKP 176

Query: 225 WPE-KIKFAIGLLPAML------GGQSYVEAQDNLTVQEWMRSRG--------VPDRVT- 284
           + + +   A+ L P +       G    +   D+++  +W  S+G        + D V  
Sbjct: 177 YDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAY 236

Query: 285 ----------------------TEEKHGSKMAFLDGNPPERLCEPIVEHIQSLGGEVRLN 344
                                   +   S +  L G+P   L  PI ++I   GG + L 
Sbjct: 237 ALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLR 296

Query: 345 SRIQKIELNNDGTVKRFL-------LNDGSVIEGDAYVFATPVDILKLLLPNDWKEIPYF 404
              ++I  +     + ++         +  +++ D YV A  V  +K LLP +W+E  +F
Sbjct: 297 WGCREILYDKSADGETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFF 356

Query: 405 KKLDKLVGVPVINVHIWFD------------RKLKNT--YDHLLFSRSPLLSVYADMSVT 464
             + +L GVPV+ V + ++            R+LK     D+LL++     S +AD+++ 
Sbjct: 357 NDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALA 416

Query: 465 C-KEYYNPNQ-SMLELVFAPAEEWISRSDSEIIDATMMELAKLFPDEISADQSKAKIMKY 491
              +YY   Q ++L+ V  P + ++   + +II+   M++ +LFP     + + +     
Sbjct: 417 SPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSS---- 476

[Close]

BLAST of Cp4.1LG03g13120 vs. TAIR 10
Match: AT3G59050.1 (polyamine oxidase 3 )

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-10
Identity = 57/256 (22.27%), Postives = 108/256 (42.19%), Query Frame = 0


Query: 241 PIVEHIQSLGGEVRLNSRIQKIELNNDGTVKRFLLNDGSVIEGDAYVFATPVDILKLLLP 300
           P++  + S G ++RL+ RI KI     G   +     G     DA V A P+ +LK  + 
Sbjct: 230 PVINTL-SKGLDIRLSHRITKISRRYSGV--KVTTEKGDTFVADAAVIALPLGVLKSGMI 289

Query: 301 NDWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYY 360
               ++P +K+        + ++ +  + K+   +D++ +     L V A+ S  C  + 
Sbjct: 290 TFEPKLPQWKQ------EAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFL 349

Query: 361 NPNQSMLE--LVFAPAEEWI----SRSDSEIIDATMMELAKLFPDEIS----------AD 420
           N +++     LV+ PA +       +SD    +    +L K+ PD  S          +D
Sbjct: 350 NLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSD 409

Query: 421 QSKAKIMKYHVVKTPRSVYKTVPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGA--- 477
            +      Y +V  P  +Y+ +          R P++  + AG+ T   Y  S+ GA   
Sbjct: 410 INSLGSYSYDIVNKPHDLYERL----------RVPLDNLFFAGEATSSSYPGSVHGAYST 466

HSP 2 Score: 41.6 bits (96), Expect = 2.2e-03
Identity = 17/37 (45.95%), Postives = 28/37 (75.68%), Query Frame = 0


Query: 107 IVIAGAGLAGLSTAKYLADAGHKPVLLEARDVLGGKV 144
           +++ G G+AG+S A+ L DA  + V+LE+RD +GG+V
Sbjct: 31  VIVIGGGMAGISAARTLQDASFQVVVLESRDRIGGRV 67

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g13120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28554	1.5e-214	66.61	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum ...	[more]
P80093	7.3e-214	66.09	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum OX=40...	[more]
Q07356	1.9e-209	65.57	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana ...	[more]
P28553	2.4e-209	65.74	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Glycine max OX=3847 G...	[more]
Q40406	3.2e-201	66.73	15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarci...	[more]

BLAST of Cp4.1LG03g13120 vs. NCBI nr


Match Name	Identity	Description
XP_023527611.1	85.42	15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita pepo sub...	[more]
XP_022955514.1	84.38	15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita moschata...	[more]
AEK86565.1	84.03	chloroplast phytoene desaterase [Cucurbita moschata]	[more]
XP_022979438.1	83.85	15-cis-phytoene desaturase, chloroplastic/chromoplastic-like [Cucurbita maxima] ...	[more]
KAA0044540.1	80.38	phytoene dehydrogenase [Cucumis melo var. makuwa]	[more]

BLAST of Cp4.1LG03g13120 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GTV7	84.38	Phytoene dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111457519 PE=3 SV=1	[more]
G1FQQ8	84.03	Phytoene dehydrogenase OS=Cucurbita moschata OX=3662 GN=PDS PE=2 SV=1	[more]
A0A6J1IW75	83.85	Phytoene dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111479159 PE=3 SV=1	[more]
A0A5A7TMX7	80.38	Phytoene dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4...	[more]
A0A5D3CYP6	80.21	Phytoene dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]

BLAST of Cp4.1LG03g13120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14210.1	1.3e-210	65.57	phytoene desaturase 3	[more]
AT4G14210.2	8.5e-210	65.22	phytoene desaturase 3	[more]
AT3G04870.1	7.1e-39	25.55	zeta-carotene desaturase	[more]
AT3G04870.2	7.1e-39	25.55	zeta-carotene desaturase	[more]
AT3G59050.1	2.4e-10	22.27	polyamine oxidase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 170..482 e-value: 2.8E-11 score: 45.0
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 107..141 e-value: 4.5E-12 score: 47.7
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 102..476
None	No IPR available	GENE3D	3.90.660.10		coord: 142..157 e-value: 4.5E-12 score: 47.7
None	No IPR available	PANTHER	PTHR42923	PROTOPORPHYRINOGEN OXIDASE	coord: 58..162
None	No IPR available	PANTHER	PTHR42923	PROTOPORPHYRINOGEN OXIDASE	coord: 220..492
None	No IPR available	PANTHER	PTHR42923:SF31	BNACNNG70650D PROTEIN	coord: 58..162 coord: 220..492
None	No IPR available	PANTHER	PTHR42923	PROTOPORPHYRINOGEN OXIDASE	coord: 163..220
None	No IPR available	PANTHER	PTHR42923:SF31	BNACNNG70650D PROTEIN	coord: 163..220
IPR002937	Amine oxidase	PFAM	PF01593	Amino_oxidase	coord: 215..472 e-value: 1.4E-42 score: 146.5 coord: 114..161 e-value: 1.3E-12 score: 47.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g13120.1	Cp4.1LG03g13120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0016020	membrane
molecular_function	GO:0016166	phytoene dehydrogenase activity
molecular_function	GO:0016491	oxidoreductase activity