Homology
BLAST of Cp4.1LG03g12010 vs. ExPASy Swiss-Prot
Match:
Q9SQV1 (DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 PE=2 SV=1)
HSP 1 Score: 944.5 bits (2440), Expect = 1.1e-273
Identity = 651/1187 (54.84%), Postives = 747/1187 (62.93%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
M T E P S GPRYAP+DPTLP+PWKGLIDGSTG+LYYWNPETNVTQYE+P S PPP
Sbjct: 1 MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPP-- 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
S T +PS+G Q Q+ + ++ GH +SQQH
Sbjct: 61 --------HSATTPKLAQIPVPSSG--------------QGHQAQHEQAKPVGH-VSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
G Q P + Q+MQQ H QQ GQ
Sbjct: 121 -------------GFQQQPQQFPSQHVRPQMMQQ---------HPAQQMPQQSGQ----- 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Q P QQ P +P Q QP+ Q Q MQNQ + PQ QY
Sbjct: 181 -----QFPQQQSQSMVPHPHGHPSVQTYQPTTQQ-QQQGMQNQHSQM--PQQLSHQYAHS 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Q Y+G++ + N Q Q P GQ F + E S KRE D G + GFS
Sbjct: 241 QQHYMGFRPHMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLAPKREGDEFHGGKKTGFSQ 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
S + S N H N++ Q+ + A++ G N V Q Q G L
Sbjct: 301 PHLPNSERSPS-QNTHFEANAAS-QKTNANLAMAQKCNGPQANA----AVTQFQQPGANL 360
Query: 361 AHRQHHSRFQDQMSPAVM---------QGQQTSAENLPGRAGNEYYFG-RNEGP--GVGP 420
H+Q R +QM ++ Q T NL R GN+ Y R E P G P
Sbjct: 361 IHQQLGPRAPNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVRGAQP 420
Query: 421 LQPRLAAIPMARSQQDTRMSGVSFPTAAPGHPSGTNFAAGHS-HNMYSHGSGGPPLSNNA 480
L P AA+P +D R+SG G P+ + A G + H Y H GP N +
Sbjct: 421 LHP--AAMP-----KDIRISG--------GPPTNADPAMGQTGHGTYGH--AGPAFPNKS 480
Query: 481 LIGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIAR 540
L+ P + + DV ++SPVE+YR+QHEVT TG+N+P+PY+TFE++G PPEILRE
Sbjct: 481 LVRPHFVTSPDVPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRE------- 540
Query: 541 TSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNP 600
+ SAGF SPTPIQAQTWPIALQ RDIVAIAKTGSGKTLGYLIPAF+LLR CRN+
Sbjct: 541 -----LLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDS 600
Query: 601 QNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVAT 660
+NGPTVL+LAPTRELATQIQDEA++FGRSSR+ CTCLYGGAPKGPQLKELERGADIVVAT
Sbjct: 601 RNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVAT 660
Query: 661 PGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK 720
PGRLNDILEMKMI F+Q+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK
Sbjct: 661 PGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK 720
Query: 721 EVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVI 780
EVRKIA+DLLVN VQVNIG VDELAANKAITQYVEVVPQMEK+RRLEQILRSQERGSKVI
Sbjct: 721 EVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVI 780
Query: 781 IFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLD 840
IFCSTKRLCD LARS+GR FGA IHGDK+QGERDWVLNQFRSGKS +L+ATDVAARGLD
Sbjct: 781 IFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLD 840
Query: 841 IKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQH 900
IKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVA+TFFTEQDWKYA DLIK+LEGA+Q
Sbjct: 841 IKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQ 900
Query: 901 VPPELRDMAMR----GGPSFGKDRGGM-GRFDAVMGGSRWDSGGRGGMRDGGFGGRG--- 960
VPP++RD+AMR GGP + +DR GM RFD+ GG+RWDSGG G R GGF GR
Sbjct: 901 VPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGGGTRWDSGGGFGGRGGGFSGREGGF 960
Query: 961 GARDGGFGGRGGMRDGGFGGRG---NMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHV- 1020
G R+GGFGG R+GGFGGRG MRD + GRGG RGRGF GP GH+
Sbjct: 961 GGREGGFGG----REGGFGGRGGRFGMRDDSF-GRGG--------NRGRGFTGPDAGHMN 1020
Query: 1021 -----GWGR-GDRGGPHDR-FSSVDGRGRGRGQSRFDNRNDFSNRSRGRSYSRSPERVRT 1080
G+GR G+ R F GRG GRG RFDNR RGRS SRSP+ V
Sbjct: 1021 VGGRGGFGRFGNNNNMESRGFGRGSGRGFGRGVGRFDNR-------RGRSRSRSPDLV-- 1047
Query: 1081 WGYSRSRSRSRSGSRSRSRSSRSWSRSRSRSRSRSRSRSWSRRHSRSRSRSRSHDNYGRS 1140
R R RS S SRSRSRS S+SRSRSRSRS SRSRS S RHSR R +Y RS
Sbjct: 1081 ----RPRRRSSSYSRSRSRSG-SYSRSRSRSRSWSRSRSRSPRHSRDRGGHNRSRSYSRS 1047
Query: 1141 RERNFDRKDDQPPESVTATSHGTRKSGFDDRGDAGQVPPVAASSNME 1156
++R+D P R SGFD + PPV + N++
Sbjct: 1141 PSPVYERRDRAP-----------RVSGFDIK------PPVESVVNLD 1047
BLAST of Cp4.1LG03g12010 vs. ExPASy Swiss-Prot
Match:
Q9LYJ9 (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 PE=2 SV=2)
HSP 1 Score: 661.4 bits (1705), Expect = 1.9e-188
Identity = 378/615 (61.46%), Postives = 445/615 (72.36%), Query Frame = 0
Query: 411 PRLAAIPMARSQQDTRMSGVSFPTA-----------APGHPSGTNF-AAGH----SHNMY 470
P+LAAIP++ S Q + S F + P SG+ F AG S N
Sbjct: 53 PKLAAIPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDA 112
Query: 471 SHGSGGPPLSNNALIGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFP 530
+ G G ++ GPP A + +SP E Y ++HE+T +G VP P M+FEATG P
Sbjct: 113 ASGLGNASSGGSSARGPPSSAAGN--ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLP 172
Query: 531 PEILREASFTIARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLI 590
E+LRE +YSAGFS+P+PIQAQ+WPIA+Q RDIVAIAKTGSGKTLGYLI
Sbjct: 173 NELLRE------------VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLI 232
Query: 591 PAFMLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQL 650
P FM L++ N+ + GPT+LVL+PTRELATQIQ EA+KFG+SS++ C CLYGGAPKGPQL
Sbjct: 233 PGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQL 292
Query: 651 KELERGADIVVATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPP 710
KE+ERG DIVVATPGRLNDILEMK I Q+S LVLDEADRMLDMGFEPQIRKIVNE+P
Sbjct: 293 KEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPT 352
Query: 711 RRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLE 770
+RQTLMYTATWPKEVRKIA DLLVN QVNIG+VDEL ANK+ITQ +EV+ MEK RLE
Sbjct: 353 KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLE 412
Query: 771 QILRSQERGSKVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSP 830
QILRSQE GSK+IIFCSTKR+CDQLAR+L R FGAAAIHGDKSQ ERD VLNQFRSG++P
Sbjct: 413 QILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTP 472
Query: 831 ILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYA 890
+LVATDVAARGLD+KDIRVV+NYDFP GVEDYVHRIGRTGRAGATG+AYTFF +QD K+A
Sbjct: 473 VLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHA 532
Query: 891 ADLIKLLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGG 950
+DLIK+LEGA+Q VPP++R+MA RGG GGM +F RW G GG
Sbjct: 533 SDLIKILEGANQKVPPQVREMATRGG-------GGMNKF------RRW-----GTPSSGG 592
Query: 951 FGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGH 1010
GGRGG D G+GGRG + G+G RG+ G G GGRG + P+R + G
Sbjct: 593 GGGRGGYGDSGYGGRG---ESGYGSRGDSGYGGRGDSGGRGSWAPSR--------DSSGS 622
HSP 2 Score: 78.2 bits (191), Expect = 7.0e-13
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 0
Query: 14 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLGPHPGVSSSKPT 73
RYAP+DP LPKPWKGL+D TG LY+WNPETNVTQYE+P S PP L P VSSS T
Sbjct: 9 RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPP-KLAAIP-VSSSVQT 68
Query: 74 SVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQHSSVAGQAT 129
+ ++ S ++G + P+ + S + + G + S +S G A+
Sbjct: 69 N-QQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLGNAS 120
BLAST of Cp4.1LG03g12010 vs. ExPASy Swiss-Prot
Match:
Q8H136 (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2)
HSP 1 Score: 652.5 bits (1682), Expect = 9.0e-186
Identity = 353/516 (68.41%), Postives = 404/516 (78.29%), Query Frame = 0
Query: 457 GSGGPPLSNNAL--IGPPHIGASD----------VTNMSPVEVYRQQHEVTATGDNVPSP 516
G GPP SN A +G GA+ + +SP E Y ++HE+T +G VP P
Sbjct: 98 GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157
Query: 517 YMTFEATGFPPEILREASFTIARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKT 576
M+FEATGFPPE+LRE + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKT
Sbjct: 158 LMSFEATGFPPELLRE------------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKT 217
Query: 577 GSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCL 636
GSGKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCL
Sbjct: 218 GSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCL 277
Query: 637 YGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQ 696
YGGAPKGPQL++LERGADIVVATPGRLNDILEM+ I RQIS LVLDEADRMLDMGFEPQ
Sbjct: 278 YGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 337
Query: 697 IRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVV 756
IRKIV EIP +RQTLMYTATWPK VRKIA DLLVN QVNIG+VDEL ANK+ITQ++EVV
Sbjct: 338 IRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVV 397
Query: 757 PQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWV 816
MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL R+L R FGAAAIHGDKSQ ERD V
Sbjct: 398 APMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNV 457
Query: 817 LNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYT 876
LNQFRSG++P+LVATDVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+T
Sbjct: 458 LNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFT 517
Query: 877 FFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRW-- 936
FF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG GGM +F SRW
Sbjct: 518 FFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGP 577
Query: 937 DSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 959
SGGRG D G+GGR G F R G+G
Sbjct: 578 PSGGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582
HSP 2 Score: 86.3 bits (212), Expect = 2.6e-15
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 14 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPGVSSSKP 73
RYAP+D TLPKPWKGLID TG LY+WNPETNVTQYEKP SLPP P VSSS
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70
Query: 74 TSVSEAHSMPSN 85
++A++ P +
Sbjct: 71 VQQTDAYAPPKD 80
BLAST of Cp4.1LG03g12010 vs. ExPASy Swiss-Prot
Match:
Q5JKF2 (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0549400 PE=2 SV=2)
HSP 1 Score: 628.2 bits (1619), Expect = 1.8e-178
Identity = 393/657 (59.82%), Postives = 454/657 (69.10%), Query Frame = 0
Query: 486 EVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSSPTPIQ 545
E YR +HE+T GDNVP+P +FE GFPPEIL+E I AGFSSPTPIQ
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKE------------IQRAGFSSPTPIQ 189
Query: 546 AQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTRELATQ 605
AQ+WPIALQ +D+VAIAKTGSGKTLGYL+P FM +++ +NNP++GPTVLVLAPTRELATQ
Sbjct: 190 AQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQ 249
Query: 606 IQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKFRQI 665
I +EA+KFGRSSR+ TCLYGGAPKGPQL++L+RG D+VVATPGRLNDILEM+ I +Q+
Sbjct: 250 ILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQV 309
Query: 666 SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNI 725
S LVLDEADRMLDMGFEPQIRKIV EIPPRRQTLMYTATWPKEVR+IA DLLV+ VQV I
Sbjct: 310 SYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTI 369
Query: 726 GSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSLGR 785
GSVDEL AN AITQ VE++ EK RRLEQILRSQ+ GSKV+IFC+TKR+CDQLAR+L R
Sbjct: 370 GSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQLARTLTR 429
Query: 786 GFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVED 845
FGA+AIHGDKSQ ER+ VL+ FRSG+SPILVATDVAARGLDIKDIRVVINYDFPTG+ED
Sbjct: 430 QFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIED 489
Query: 846 YVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPSFGK 905
YVHRIGRTGRAGATGVAYTFF +QD KYAADLIK+LEGA+Q VP +L DMA RGG
Sbjct: 490 YVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASRGG----- 549
Query: 906 DRGGMGRFDAVMGGSRW----DSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRG 965
RGG R +RW D GG D +GG RDG G G
Sbjct: 550 -RGGRKR-------NRWATRSDRGGSHSELDSRYGG---------------RDGLSGSSG 609
Query: 966 NMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGR--GR 1025
+ + R GD DGR R GR
Sbjct: 610 RLDSSRSSRRHDYGD------------------------------------DGRSRRSGR 669
Query: 1026 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRS 1085
G+SR +R+D S+R YSRSP+R SR SRSR+ SRSRSR SRS++R+R S
Sbjct: 670 GRSRSRSRSD-SDR-----YSRSPKR------SRRHSRSRTRSRSRSR-SRSYTRNRRAS 697
Query: 1086 RSRSRSRSWSRRHSRSRSRSRS--------------HDNYGRSRERNFDRKDDQPPE 1123
RSRSRS SRRH RS + S S + R+ + D KDD+ PE
Sbjct: 730 RSRSRSPGASRRHERSATGSGSALPDSGHGERKRTPEADPSRNHTNHSDPKDDRHPE 697
HSP 2 Score: 97.8 bits (242), Expect = 8.5e-19
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0
Query: 13 PRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV----SLPPPLPLGPHP 66
PRYAPDDP+LPKPW+GL+DG+TG LYYWNPETN+TQYEKP+ LPPP PL P P
Sbjct: 10 PRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQLPPPPPLPPPP 66
BLAST of Cp4.1LG03g12010 vs. ExPASy Swiss-Prot
Match:
P46942 (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)
HSP 1 Score: 622.5 bits (1604), Expect = 1.0e-176
Identity = 342/512 (66.80%), Postives = 398/512 (77.73%), Query Frame = 0
Query: 486 EVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSSPTPIQ 545
E Y +++E++ TG +VP+P +FEATGFP EI+RE ++ AGFS+PTPIQ
Sbjct: 125 ESYCRRNEISVTGGDVPAPLTSFEATGFPSEIVRE------------MHQAGFSAPTPIQ 184
Query: 546 AQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTRELATQ 605
AQ+WPIALQGRDIVAIAKTGSGKTLGYL+PAF+ L+Q R NPQ GPT+LVL+PTRELATQ
Sbjct: 185 AQSWPIALQGRDIVAIAKTGSGKTLGYLMPAFIHLQQRRKNPQLGPTILVLSPTRELATQ 244
Query: 606 IQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKFRQI 665
IQ EA+KFG+SSR+ CTCLYGGAPKGPQL+EL RG DIVVATPGRLNDILEM+ + Q+
Sbjct: 245 IQAEAVKFGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQV 304
Query: 666 SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNI 725
S LVLDEADRMLDMGFEPQIRKIV E+P +RQTLMYTATWPK VRKIA DLLVNSVQVNI
Sbjct: 305 SYLVLDEADRMLDMGFEPQIRKIVKEVPVQRQTLMYTATWPKGVRKIAADLLVNSVQVNI 364
Query: 726 GSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSLGR 785
G+VDEL ANK+ITQ++EVV MEKQRR+EQILRS+E GSK+IIFCSTK++CDQL+R+L R
Sbjct: 365 GNVDELVANKSITQHIEVVLPMEKQRRVEQILRSKEPGSKIIIFCSTKKMCDQLSRNLTR 424
Query: 786 GFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVED 845
FGAAAIHGDKSQGERD+VL+QFR+G+SP+LVATDVAARGLDIKDIRVVINYDFPTG+ED
Sbjct: 425 NFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIED 484
Query: 846 YVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPSFGK 905
YVHRIGRTGRAGA+G+AYTFF++QD K+A DL+K+LEGA+Q VP ELRDMA RG
Sbjct: 485 YVHRIGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMASRG------ 544
Query: 906 DRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRD 965
GGMGR + W SG GG GGRGG + + GR GG G R
Sbjct: 545 --GGMGR-----ARNHWGSG------PGGRGGRGGPYNSSYVGRN-------GGHGYDRG 598
Query: 966 GAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGW 998
R G G + R R GW
Sbjct: 605 SRDSDRYGHGTYNADAPRKRSRSRSPNIGSGW 598
HSP 2 Score: 87.8 bits (216), Expect = 8.8e-16
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 0
Query: 10 SLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV 54
S GP YAP+DPTLPKPWKGL+DG+TG +Y+WNPETN TQYE+PV
Sbjct: 8 SAGPSYAPEDPTLPKPWKGLVDGTTGFIYFWNPETNDTQYERPV 51
BLAST of Cp4.1LG03g12010 vs. NCBI nr
Match:
XP_023527087.1 (DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2239 bits (5801), Expect = 0.0
Identity = 1166/1178 (98.98%), Postives = 1166/1178 (98.98%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT
Sbjct: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG
Sbjct: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGRG 1020
GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGRG
Sbjct: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGRG 1020
Query: 1021 QSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRSR 1080
QSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRSR
Sbjct: 1021 QSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRSR 1080
Query: 1081 SRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDRG 1140
SRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDRG
Sbjct: 1081 SRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDRG 1140
Query: 1141 DAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1178
DAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI
Sbjct: 1141 DAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1166
BLAST of Cp4.1LG03g12010 vs. NCBI nr
Match:
XP_022955621.1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 2202 bits (5706), Expect = 0.0
Identity = 1154/1179 (97.88%), Postives = 1156/1179 (98.05%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT
Sbjct: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSR+CCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRICCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVP ELRDMAMRGG
Sbjct: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPAELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG-DRGGPHDRFSSVDGRGRGR 1020
GNMRDG AGGRGGRGDFF TRGRGRGFGGPAGGHVGWGRG DRGGPHDRFSSVDGRGRGR
Sbjct: 961 GNMRDGTAGGRGGRGDFFSTRGRGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020
Query: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRS 1080
GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRS S RSRSSRSWSRSRSRS
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS----RSRSSRSWSRSRSRS 1080
Query: 1081 RSRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR 1140
SRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR
Sbjct: 1081 -SRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR 1140
Query: 1141 GDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1178
GDAGQVPPVAASSN+EPGKPEN AEDTSDGTVNAAAQVI
Sbjct: 1141 GDAGQVPPVAASSNIEPGKPENSAEDTSDGTVNAAAQVI 1162
BLAST of Cp4.1LG03g12010 vs. NCBI nr
Match:
KAG7018553.1 (DEAD-box ATP-dependent RNA helicase 40, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2184 bits (5658), Expect = 0.0
Identity = 1150/1197 (96.07%), Postives = 1151/1197 (96.16%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQ----------------DTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLS 480
SQQ DTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLS
Sbjct: 421 SQQVLHFMSISYANCPFFQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLS 480
Query: 481 NNALIGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFT 540
NNALIGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFT
Sbjct: 481 NNALIGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFT 540
Query: 541 IARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCR 600
IARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCR
Sbjct: 541 IARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCR 600
Query: 601 NNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIV 660
NNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIV
Sbjct: 601 NNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIV 660
Query: 661 VATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT 720
VATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT
Sbjct: 661 VATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT 720
Query: 721 WPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGS 780
WPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGS
Sbjct: 721 WPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGS 780
Query: 781 KVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAAR 840
KVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAAR
Sbjct: 781 KVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAAR 840
Query: 841 GLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGA 900
GLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGA
Sbjct: 841 GLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGA 900
Query: 901 DQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDG 960
DQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDG
Sbjct: 901 DQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDG 960
Query: 961 GFGGRGGMRDGGFGGRGNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG-DRG 1020
GFGGRGGMRDGGFGGRGNMRDG AGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG DRG
Sbjct: 961 GFGGRGGMRDGGFGGRGNMRDGTAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRGGDRG 1020
Query: 1021 GPHDRFSSVDGRGRGRGQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSR 1080
GPHDRFSSVDGRGRGRGQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRS S
Sbjct: 1021 GPHDRFSSVDGRGRGRGQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS--- 1080
Query: 1081 SRSRSSRSWSRSRSRSRSRSRSRS------WSRRHSRSRSRSRSHDNYGRSRERNFDRKD 1140
RSRSSRSWSRSRSRSRSRSRSRS WSRRHSRSRSRSRSHDNYGRSR
Sbjct: 1081 -RSRSSRSWSRSRSRSRSRSRSRSRSRSQSWSRRHSRSRSRSRSHDNYGRSR-------- 1140
Query: 1141 DQPPESVTATSHGTRKSGFDDRGDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAA 1174
A SHGTRKSGFDDRGDAGQVPPVAASSN+EPGKPENGAEDTSDGTVNAA
Sbjct: 1141 --------AASHGTRKSGFDDRGDAGQVPPVAASSNIEPGKPENGAEDTSDGTVNAA 1177
BLAST of Cp4.1LG03g12010 vs. NCBI nr
Match:
XP_022955622.1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 2161 bits (5600), Expect = 0.0
Identity = 1138/1179 (96.52%), Postives = 1140/1179 (96.69%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT
Sbjct: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSR+CCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRICCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVP ELRDMAMRGG
Sbjct: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPAELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG-DRGGPHDRFSSVDGRGRGR 1020
GNMRDG AGGRGGRGDFF TRGRGRGFGGPAGGHVGWGRG DRGGPHDRFSSVDGRGRGR
Sbjct: 961 GNMRDGTAGGRGGRGDFFSTRGRGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020
Query: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRS 1080
GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRS S RSRSSRSWSRSRSRS
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS----RSRSSRSWSRSRSRS 1080
Query: 1081 RSRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR 1140
SRSRSRSWSRRHSRSRSRSRSHDNYGRS TATSHGTRKSGFDDR
Sbjct: 1081 -SRSRSRSWSRRHSRSRSRSRSHDNYGRS----------------TATSHGTRKSGFDDR 1140
Query: 1141 GDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1178
GDAGQVPPVAASSN+EPGKPEN AEDTSDGTVNAAAQVI
Sbjct: 1141 GDAGQVPPVAASSNIEPGKPENSAEDTSDGTVNAAAQVI 1146
BLAST of Cp4.1LG03g12010 vs. NCBI nr
Match:
KAG6582152.1 (DEAD-box ATP-dependent RNA helicase 40, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2160 bits (5597), Expect = 0.0
Identity = 1138/1181 (96.36%), Postives = 1139/1181 (96.44%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT
Sbjct: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG
Sbjct: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG-DRGGPHDRFSSVDGRGRGR 1020
GNMRDG AGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG DRGGPHDRFSSVDGRGRGR
Sbjct: 961 GNMRDGTAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020
Query: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRS 1080
GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRS S RSRSSRSWSRSRSRS
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS----RSRSSRSWSRSRSRS 1080
Query: 1081 RSRSRSRS------WSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRK 1140
RSRSRSRS WSRRHSRSRSRSRSHDNYGRSR A SHGTRK
Sbjct: 1081 RSRSRSRSRSRSQSWSRRHSRSRSRSRSHDNYGRSR----------------AASHGTRK 1140
Query: 1141 SGFDDRGDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAA 1174
SGFDDRGDAGQVPPVAASSN+EPGKPENGAEDTSDGTVNAA
Sbjct: 1141 SGFDDRGDAGQVPPVAASSNIEPGKPENGAEDTSDGTVNAA 1149
BLAST of Cp4.1LG03g12010 vs. ExPASy TrEMBL
Match:
A0A6J1GUA0 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457571 PE=4 SV=1)
HSP 1 Score: 2202 bits (5706), Expect = 0.0
Identity = 1154/1179 (97.88%), Postives = 1156/1179 (98.05%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT
Sbjct: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSR+CCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRICCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVP ELRDMAMRGG
Sbjct: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPAELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG-DRGGPHDRFSSVDGRGRGR 1020
GNMRDG AGGRGGRGDFF TRGRGRGFGGPAGGHVGWGRG DRGGPHDRFSSVDGRGRGR
Sbjct: 961 GNMRDGTAGGRGGRGDFFSTRGRGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020
Query: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRS 1080
GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRS S RSRSSRSWSRSRSRS
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS----RSRSSRSWSRSRSRS 1080
Query: 1081 RSRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR 1140
SRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR
Sbjct: 1081 -SRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR 1140
Query: 1141 GDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1178
GDAGQVPPVAASSN+EPGKPEN AEDTSDGTVNAAAQVI
Sbjct: 1141 GDAGQVPPVAASSNIEPGKPENSAEDTSDGTVNAAAQVI 1162
BLAST of Cp4.1LG03g12010 vs. ExPASy TrEMBL
Match:
A0A6J1GU57 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457571 PE=4 SV=1)
HSP 1 Score: 2161 bits (5600), Expect = 0.0
Identity = 1138/1179 (96.52%), Postives = 1140/1179 (96.69%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT
Sbjct: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSR+CCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRICCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVP ELRDMAMRGG
Sbjct: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPAELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRG-DRGGPHDRFSSVDGRGRGR 1020
GNMRDG AGGRGGRGDFF TRGRGRGFGGPAGGHVGWGRG DRGGPHDRFSSVDGRGRGR
Sbjct: 961 GNMRDGTAGGRGGRGDFFSTRGRGRGFGGPAGGHVGWGRGGDRGGPHDRFSSVDGRGRGR 1020
Query: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRS 1080
GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRS S RSRSSRSWSRSRSRS
Sbjct: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS----RSRSSRSWSRSRSRS 1080
Query: 1081 RSRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR 1140
SRSRSRSWSRRHSRSRSRSRSHDNYGRS TATSHGTRKSGFDDR
Sbjct: 1081 -SRSRSRSWSRRHSRSRSRSRSHDNYGRS----------------TATSHGTRKSGFDDR 1140
Query: 1141 GDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1178
GDAGQVPPVAASSN+EPGKPEN AEDTSDGTVNAAAQVI
Sbjct: 1141 GDAGQVPPVAASSNIEPGKPENSAEDTSDGTVNAAAQVI 1146
BLAST of Cp4.1LG03g12010 vs. ExPASy TrEMBL
Match:
A0A6J1IRF9 (DEAD-box ATP-dependent RNA helicase 14-like OS=Cucurbita maxima OX=3661 GN=LOC111479326 PE=4 SV=1)
HSP 1 Score: 2140 bits (5544), Expect = 0.0
Identity = 1131/1180 (95.85%), Postives = 1133/1180 (96.02%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHPGVSSS PTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LGPHPGVSSSNPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ
Sbjct: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQYIGYQQSVHPSVQHNL+QQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS
Sbjct: 241 QLQYIGYQQSVHPSVQHNLKQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQFEQSGGTSSIHNLHPGTNSSQMQ FGSASDQARQF GSPGNIQQQNPVVQLQHAGTEL
Sbjct: 301 SQFEQSGGTSSIHNLHPGTNSSQMQ-FGSASDQARQFVGSPGNIQQQNPVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR
Sbjct: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT
Sbjct: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG
Sbjct: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGF GRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFCGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGRG 1020
GNMRDG AGGRGGRGDFF TRGRGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGRG
Sbjct: 961 GNMRDGTAGGRGGRGDFFSTRGRGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGRG 1020
Query: 1021 QSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRSR 1080
QSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRS S RSRSSRSWSRSRSRSR
Sbjct: 1021 QSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGS----RSRSSRSWSRSRSRSR 1080
Query: 1081 SRSRSRSWSRRHSRSRSRSRS--HDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDD 1140
SRSRSWSRRHSRSRSRSRS HDNYGRS A SHGTRKSGFDD
Sbjct: 1081 --SRSRSWSRRHSRSRSRSRSRSHDNYGRS----------------AAMSHGTRKSGFDD 1140
Query: 1141 RGDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1178
RGDAGQVPPVAASSN+EPGKPENGAEDTSDG VNAAAQ I
Sbjct: 1141 RGDAGQVPPVAASSNIEPGKPENGAEDTSDGIVNAAAQGI 1145
BLAST of Cp4.1LG03g12010 vs. ExPASy TrEMBL
Match:
A0A6J1C7W7 (DEAD-box ATP-dependent RNA helicase 46 OS=Momordica charantia OX=3673 GN=LOC111009186 PE=4 SV=1)
HSP 1 Score: 1955 bits (5065), Expect = 0.0
Identity = 1041/1190 (87.48%), Postives = 1088/1190 (91.43%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
LGPHP S+SKP S+ EAHSMP+NG LTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61 LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSV G VNHHPG+QMAPDGRQ+S+Q NQVMQQ G+FAMSS HLGQQ VM Q QKMAH
Sbjct: 121 SSVTGHVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQSQKMAHK 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
N QM+QHP Q Q LQNPGQQIPQPSIQ+LGQP+MQNQTPLVGQPQGPQ YGQQ
Sbjct: 181 NQQMAQHPPNQ------QVLQNPGQQIPQPSIQNLGQPNMQNQTPLVGQPQGPQ--YGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QLQY+GYQQSVHPSVQ N QQQV+QSPLGQPF NHLEQKS FL REEDN+QSGNQVGFSS
Sbjct: 241 QLQYMGYQQSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSS 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQF+QSGGTSSIHNLHPGTNSSQMQQFG A+DQAR FGGSPGN+QQQ+ VVQLQHAGTEL
Sbjct: 301 SQFQQSGGTSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNLQQQHSVVQLQHAGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
HRQHHSRFQDQM PAVMQGQQ AENLPGRAGNE+YFGRNEGPG GP QPRLAAIPMAR
Sbjct: 361 THRQHHSRFQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQ+TRM GV FP+ APGHPSGTNFAAGHSH+MYSHGSGGP L NNALIGPPH+ ASDVT
Sbjct: 421 SQQETRMGGVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVVASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVP+P+MTFEATGFPPE+LRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPELLRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
FRQ+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 NFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
R+LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP
Sbjct: 781 RNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TG+EDYVHRIGRTGRAGATGVAYTFF+EQDWKYAADLIK+LEGADQHVPPELRDMAMRGG
Sbjct: 841 TGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRGGMGRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDG-AAGGRGGRGDFFPTRG-RGRGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRG 1020
GNMRDG AAGGRGGRGDFFP RG RGRGFGGP GGHVGWGRGDRGGPHDR++SVDGRGRG
Sbjct: 961 GNMRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRG 1020
Query: 1021 RGQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSR 1080
RGQ RFD+R DFSNRSRGRSYSRSPERVRTWGYSRSRSRS S SRS SRSWSRSRSR
Sbjct: 1021 RGQGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSHSRS----SRSWSRSRSR 1080
Query: 1081 SRSRSRSRS------WSRRHSRSRSRSRSHDNYGRSRERNFDRKDD-QPPESVTATSHGT 1140
SRSRSRSRS WSRR+SRSRSRSR+HDN+ RSRE NFDRKDD PPESVTA+S GT
Sbjct: 1081 SRSRSRSRSRTRSRSWSRRYSRSRSRSRNHDNHERSRESNFDRKDDLPPPESVTASSPGT 1140
Query: 1141 RKSGFDDRGDAGQVPPVAA--SSNMEPGKPENGAEDTSDGTVNAAA-QVI 1178
+KS F++R DA Q PP + ++N+EPG PENGA D SD VNAA QVI
Sbjct: 1141 QKSAFEERDDARQFPPASGIGNNNIEPGNPENGA-DMSDQIVNAAPPQVI 1165
BLAST of Cp4.1LG03g12010 vs. ExPASy TrEMBL
Match:
A0A6J1HIK1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464240 PE=4 SV=1)
HSP 1 Score: 1942 bits (5032), Expect = 0.0
Identity = 1027/1179 (87.11%), Postives = 1080/1179 (91.60%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
L PHP S+SKPTS+ E HSMPSNG LTPHVQ+NHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61 LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
SSVAGQA VNHHP +QMAPDGRQ+S Q NQV+QQQG+F MS H+GQQQVMHQGQKMAHA
Sbjct: 121 SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
N Q+SQHPNQQP LQN GQQIPQPSIQHLGQP+MQNQTPLVGQPQGPQ YGQQ
Sbjct: 181 NQQISQHPNQQP-------LQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQ--YGQQ 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
QY+GYQQSVHPSVQ N QQQVQ+SPLGQPFGNHLEQKSAF KREEDNIQSGNQ+GFS+
Sbjct: 241 HPQYMGYQQSVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFST 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
SQF+QSGGTSSIH++HPGTNSSQMQQ+G SDQARQFGGSPGN+QQ +PVVQLQH+GTEL
Sbjct: 301 SQFQQSGGTSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTEL 360
Query: 361 AHRQHHSRFQDQMSPAVMQGQQTSAENLPGRAGNEYYFGRNEGPGVGPLQPRLAAIPMAR 420
HRQHHSRFQD M PA MQ +Q +ENLPGRAGNEY+FGRNEGPG+GP QPRLAAIPMAR
Sbjct: 361 THRQHHSRFQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMAR 420
Query: 421 SQQDTRMSGVSFPTAAPGHPSGTNFAAGHSHNMYSHGSGGPPLSNNALIGPPHIGASDVT 480
SQQD RMSGV FP+AAP HPSGT+FAAG SHNMY+HGSGGP LSNNAL+GPPHIGASDVT
Sbjct: 421 SQQDARMSGVPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVT 480
Query: 481 NMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIARTSFNWIYSAGFSS 540
NMSPVEVYRQQHEVTATGDNVP+P+MTFEATGFPPEILRE IYSAGFSS
Sbjct: 481 NMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPEILRE------------IYSAGFSS 540
Query: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTR 600
PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAF+LLRQCRNNPQNGPTVLVLAPTR
Sbjct: 541 PTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFVLLRQCRNNPQNGPTVLVLAPTR 600
Query: 601 ELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMI 660
ELATQIQDEAIKFGR+SR+CCTCLYGGAPKGPQLKEL+RGADIVVATPGRLNDILEMKMI
Sbjct: 601 ELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMI 660
Query: 661 KFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
FRQ+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS
Sbjct: 661 NFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNS 720
Query: 721 VQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
VQVNIGSVDELAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA
Sbjct: 721 VQVNIGSVDELAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLA 780
Query: 781 RSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFP 840
R+LGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVIN+DFP
Sbjct: 781 RNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFP 840
Query: 841 TGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGG 900
TG+EDYVHRIGRTGRAGATG+AYTFF EQDWKYAADLIK+LEGADQ VPPELRDMAMRGG
Sbjct: 841 TGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGG 900
Query: 901 PSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
PSFGKDRG +GRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR
Sbjct: 901 PSFGKDRGALGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGR 960
Query: 961 GNMRDGAAGGRGGRGDFFPTRGRG-RGFGGPAGGHVGWGRGDRGGPHDRFSSVDGRGRGR 1020
G MRDG AGGRGGRGDFF RGRG R FGGP GGHVGW RGDRGGP DR+SSVDGRGRGR
Sbjct: 961 GGMRDGLAGGRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDRGGPQDRYSSVDGRGRGR 1020
Query: 1021 GQSRFDNRNDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSGSRSRSRSSRSWSRSRSRS 1080
GQ RFDNR DFSNRSRGRSYSRSPERVRTWGYSRSRSRSRS RS SRSSRSWSRSRSR
Sbjct: 1021 GQGRFDNRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRS--RSGSRSSRSWSRSRSR- 1080
Query: 1081 RSRSRSRSWSRRHSRSRSRSRSHDNYGRSRERNFDRKDDQPPESVTATSHGTRKSGFDDR 1140
SRSRSWSRR+SRSRSRS HDN+ RS E+NFDRKDD PPESVTATS GTRK+ + R
Sbjct: 1081 ---SRSRSWSRRYSRSRSRS--HDNHERSHEKNFDRKDDIPPESVTATSPGTRKNAIEIR 1140
Query: 1141 GDAGQVPPVAASSNMEPGKPENGAEDTSDGTVNAAAQVI 1178
D Q+PP A S+N++PG PENGA DT+D VNAAAQVI
Sbjct: 1141 EDGRQLPP-ADSNNIKPGNPENGA-DTNDQIVNAAAQVI 1148
BLAST of Cp4.1LG03g12010 vs. TAIR 10
Match:
AT3G06480.1 (DEAD box RNA helicase family protein )
HSP 1 Score: 944.5 bits (2440), Expect = 8.1e-275
Identity = 651/1187 (54.84%), Postives = 747/1187 (62.93%), Query Frame = 0
Query: 1 METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60
M T E P S GPRYAP+DPTLP+PWKGLIDGSTG+LYYWNPETNVTQYE+P S PPP
Sbjct: 1 MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPP-- 60
Query: 61 LGPHPGVSSSKPTSVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQH 120
S T +PS+G Q Q+ + ++ GH +SQQH
Sbjct: 61 --------HSATTPKLAQIPVPSSG--------------QGHQAQHEQAKPVGH-VSQQH 120
Query: 121 SSVAGQATVNHHPGLQMAPDGRQNSSQSNQVMQQQGLFAMSSPHLGQQQVMHQGQKMAHA 180
G Q P + Q+MQQ H QQ GQ
Sbjct: 121 -------------GFQQQPQQFPSQHVRPQMMQQ---------HPAQQMPQQSGQ----- 180
Query: 181 NPQMSQHPNQQPPQNPGQPLQNPGQQIPQPSIQHLGQPSMQNQTPLVGQPQGPQPQYGQQ 240
Q P QQ P +P Q QP+ Q Q MQNQ + PQ QY
Sbjct: 181 -----QFPQQQSQSMVPHPHGHPSVQTYQPTTQQ-QQQGMQNQHSQM--PQQLSHQYAHS 240
Query: 241 QLQYIGYQQSVHPSVQHNLQQQVQQSPLGQPFGNHLEQKSAFLKREEDNIQSGNQVGFSS 300
Q Y+G++ + N Q Q P GQ F + E S KRE D G + GFS
Sbjct: 241 QQHYMGFRPHMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLAPKREGDEFHGGKKTGFSQ 300
Query: 301 SQFEQSGGTSSIHNLHPGTNSSQMQQFGSASDQARQFGGSPGNIQQQNPVVQLQHAGTEL 360
S + S N H N++ Q+ + A++ G N V Q Q G L
Sbjct: 301 PHLPNSERSPS-QNTHFEANAAS-QKTNANLAMAQKCNGPQANA----AVTQFQQPGANL 360
Query: 361 AHRQHHSRFQDQMSPAVM---------QGQQTSAENLPGRAGNEYYFG-RNEGP--GVGP 420
H+Q R +QM ++ Q T NL R GN+ Y R E P G P
Sbjct: 361 IHQQLGPRAPNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVRGAQP 420
Query: 421 LQPRLAAIPMARSQQDTRMSGVSFPTAAPGHPSGTNFAAGHS-HNMYSHGSGGPPLSNNA 480
L P AA+P +D R+SG G P+ + A G + H Y H GP N +
Sbjct: 421 LHP--AAMP-----KDIRISG--------GPPTNADPAMGQTGHGTYGH--AGPAFPNKS 480
Query: 481 LIGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFPPEILREASFTIAR 540
L+ P + + DV ++SPVE+YR+QHEVT TG+N+P+PY+TFE++G PPEILRE
Sbjct: 481 LVRPHFVTSPDVPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRE------- 540
Query: 541 TSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFMLLRQCRNNP 600
+ SAGF SPTPIQAQTWPIALQ RDIVAIAKTGSGKTLGYLIPAF+LLR CRN+
Sbjct: 541 -----LLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDS 600
Query: 601 QNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELERGADIVVAT 660
+NGPTVL+LAPTRELATQIQDEA++FGRSSR+ CTCLYGGAPKGPQLKELERGADIVVAT
Sbjct: 601 RNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVAT 660
Query: 661 PGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK 720
PGRLNDILEMKMI F+Q+SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK
Sbjct: 661 PGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK 720
Query: 721 EVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVI 780
EVRKIA+DLLVN VQVNIG VDELAANKAITQYVEVVPQMEK+RRLEQILRSQERGSKVI
Sbjct: 721 EVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVI 780
Query: 781 IFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLD 840
IFCSTKRLCD LARS+GR FGA IHGDK+QGERDWVLNQFRSGKS +L+ATDVAARGLD
Sbjct: 781 IFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLD 840
Query: 841 IKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYAADLIKLLEGADQH 900
IKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVA+TFFTEQDWKYA DLIK+LEGA+Q
Sbjct: 841 IKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQ 900
Query: 901 VPPELRDMAMR----GGPSFGKDRGGM-GRFDAVMGGSRWDSGGRGGMRDGGFGGRG--- 960
VPP++RD+AMR GGP + +DR GM RFD+ GG+RWDSGG G R GGF GR
Sbjct: 901 VPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGGGTRWDSGGGFGGRGGGFSGREGGF 960
Query: 961 GARDGGFGGRGGMRDGGFGGRG---NMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGHV- 1020
G R+GGFGG R+GGFGGRG MRD + GRGG RGRGF GP GH+
Sbjct: 961 GGREGGFGG----REGGFGGRGGRFGMRDDSF-GRGG--------NRGRGFTGPDAGHMN 1020
Query: 1021 -----GWGR-GDRGGPHDR-FSSVDGRGRGRGQSRFDNRNDFSNRSRGRSYSRSPERVRT 1080
G+GR G+ R F GRG GRG RFDNR RGRS SRSP+ V
Sbjct: 1021 VGGRGGFGRFGNNNNMESRGFGRGSGRGFGRGVGRFDNR-------RGRSRSRSPDLV-- 1047
Query: 1081 WGYSRSRSRSRSGSRSRSRSSRSWSRSRSRSRSRSRSRSWSRRHSRSRSRSRSHDNYGRS 1140
R R RS S SRSRSRS S+SRSRSRSRS SRSRS S RHSR R +Y RS
Sbjct: 1081 ----RPRRRSSSYSRSRSRSG-SYSRSRSRSRSWSRSRSRSPRHSRDRGGHNRSRSYSRS 1047
Query: 1141 RERNFDRKDDQPPESVTATSHGTRKSGFDDRGDAGQVPPVAASSNME 1156
++R+D P R SGFD + PPV + N++
Sbjct: 1141 PSPVYERRDRAP-----------RVSGFDIK------PPVESVVNLD 1047
BLAST of Cp4.1LG03g12010 vs. TAIR 10
Match:
AT5G14610.2 (DEAD box RNA helicase family protein )
HSP 1 Score: 661.4 bits (1705), Expect = 1.4e-189
Identity = 378/615 (61.46%), Postives = 445/615 (72.36%), Query Frame = 0
Query: 411 PRLAAIPMARSQQDTRMSGVSFPTA-----------APGHPSGTNF-AAGH----SHNMY 470
P+LAAIP++ S Q + S F + P SG+ F AG S N
Sbjct: 53 PKLAAIPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDA 112
Query: 471 SHGSGGPPLSNNALIGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPSPYMTFEATGFP 530
+ G G ++ GPP A + +SP E Y ++HE+T +G VP P M+FEATG P
Sbjct: 113 ASGLGNASSGGSSARGPPSSAAGN--ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLP 172
Query: 531 PEILREASFTIARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLI 590
E+LRE +YSAGFS+P+PIQAQ+WPIA+Q RDIVAIAKTGSGKTLGYLI
Sbjct: 173 NELLRE------------VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLI 232
Query: 591 PAFMLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQL 650
P FM L++ N+ + GPT+LVL+PTRELATQIQ EA+KFG+SS++ C CLYGGAPKGPQL
Sbjct: 233 PGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQL 292
Query: 651 KELERGADIVVATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQIRKIVNEIPP 710
KE+ERG DIVVATPGRLNDILEMK I Q+S LVLDEADRMLDMGFEPQIRKIVNE+P
Sbjct: 293 KEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPT 352
Query: 711 RRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLE 770
+RQTLMYTATWPKEVRKIA DLLVN QVNIG+VDEL ANK+ITQ +EV+ MEK RLE
Sbjct: 353 KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLE 412
Query: 771 QILRSQERGSKVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSP 830
QILRSQE GSK+IIFCSTKR+CDQLAR+L R FGAAAIHGDKSQ ERD VLNQFRSG++P
Sbjct: 413 QILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTP 472
Query: 831 ILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFTEQDWKYA 890
+LVATDVAARGLD+KDIRVV+NYDFP GVEDYVHRIGRTGRAGATG+AYTFF +QD K+A
Sbjct: 473 VLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHA 532
Query: 891 ADLIKLLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRWDSGGRGGMRDGG 950
+DLIK+LEGA+Q VPP++R+MA RGG GGM +F RW G GG
Sbjct: 533 SDLIKILEGANQKVPPQVREMATRGG-------GGMNKF------RRW-----GTPSSGG 592
Query: 951 FGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGAAGGRGGRGDFFPTRGRGRGFGGPAGGH 1010
GGRGG D G+GGRG + G+G RG+ G G GGRG + P+R + G
Sbjct: 593 GGGRGGYGDSGYGGRG---ESGYGSRGDSGYGGRGDSGGRGSWAPSR--------DSSGS 622
HSP 2 Score: 78.2 bits (191), Expect = 5.0e-14
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 0
Query: 14 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLGPHPGVSSSKPT 73
RYAP+DP LPKPWKGL+D TG LY+WNPETNVTQYE+P S PP L P VSSS T
Sbjct: 9 RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPP-KLAAIP-VSSSVQT 68
Query: 74 SVSEAHSMPSNGALTPHVQKNHHVPQQEGQSNSQLSQQPGHLMSQQHSSVAGQAT 129
+ ++ S ++G + P+ + S + + G + S +S G A+
Sbjct: 69 N-QQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLGNAS 120
BLAST of Cp4.1LG03g12010 vs. TAIR 10
Match:
AT3G01540.1 (DEAD box RNA helicase 1 )
HSP 1 Score: 654.4 bits (1687), Expect = 1.7e-187
Identity = 354/514 (68.87%), Postives = 406/514 (78.99%), Query Frame = 0
Query: 457 GSGGPPLSNNAL--IGPPHIGASD----------VTNMSPVEVYRQQHEVTATGDNVPSP 516
G GPP SN A +G GA+ + +SP E Y ++HE+T +G VP P
Sbjct: 98 GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157
Query: 517 YMTFEATGFPPEILREASFTIARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKT 576
M+FEATGFPPE+LRE + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKT
Sbjct: 158 LMSFEATGFPPELLRE------------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKT 217
Query: 577 GSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCL 636
GSGKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCL
Sbjct: 218 GSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCL 277
Query: 637 YGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQ 696
YGGAPKGPQL++LERGADIVVATPGRLNDILEM+ I RQIS LVLDEADRMLDMGFEPQ
Sbjct: 278 YGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 337
Query: 697 IRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVV 756
IRKIV EIP +RQTLMYTATWPK VRKIA DLLVN QVNIG+VDEL ANK+ITQ++EVV
Sbjct: 338 IRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVV 397
Query: 757 PQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWV 816
MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL R+L R FGAAAIHGDKSQ ERD V
Sbjct: 398 APMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNV 457
Query: 817 LNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYT 876
LNQFRSG++P+LVATDVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+T
Sbjct: 458 LNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFT 517
Query: 877 FFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRW-- 936
FF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG GGM +F SRW
Sbjct: 518 FFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGP 577
Query: 937 DSGGRGGMRDGGFGGRG--GARDGGFGGRGGMRD 955
SGGRG D G+GGRG +RD G G R+
Sbjct: 578 PSGGRGRGGDSGYGGRGSFASRDRSSNGWGRERE 585
HSP 2 Score: 86.3 bits (212), Expect = 1.8e-16
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 14 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPGVSSSKP 73
RYAP+D TLPKPWKGLID TG LY+WNPETNVTQYEKP SLPP P VSSS
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70
Query: 74 TSVSEAHSMPSN 85
++A++ P +
Sbjct: 71 VQQTDAYAPPKD 80
BLAST of Cp4.1LG03g12010 vs. TAIR 10
Match:
AT3G01540.2 (DEAD box RNA helicase 1 )
HSP 1 Score: 652.5 bits (1682), Expect = 6.4e-187
Identity = 353/516 (68.41%), Postives = 404/516 (78.29%), Query Frame = 0
Query: 457 GSGGPPLSNNAL--IGPPHIGASD----------VTNMSPVEVYRQQHEVTATGDNVPSP 516
G GPP SN A +G GA+ + +SP E Y ++HE+T +G VP P
Sbjct: 98 GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157
Query: 517 YMTFEATGFPPEILREASFTIARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKT 576
M+FEATGFPPE+LRE + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKT
Sbjct: 158 LMSFEATGFPPELLRE------------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKT 217
Query: 577 GSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCL 636
GSGKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCL
Sbjct: 218 GSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCL 277
Query: 637 YGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQ 696
YGGAPKGPQL++LERGADIVVATPGRLNDILEM+ I RQIS LVLDEADRMLDMGFEPQ
Sbjct: 278 YGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 337
Query: 697 IRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVV 756
IRKIV EIP +RQTLMYTATWPK VRKIA DLLVN QVNIG+VDEL ANK+ITQ++EVV
Sbjct: 338 IRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVV 397
Query: 757 PQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWV 816
MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL R+L R FGAAAIHGDKSQ ERD V
Sbjct: 398 APMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNV 457
Query: 817 LNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYT 876
LNQFRSG++P+LVATDVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+T
Sbjct: 458 LNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFT 517
Query: 877 FFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRW-- 936
FF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG GGM +F SRW
Sbjct: 518 FFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGP 577
Query: 937 DSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 959
SGGRG D G+GGR G F R G+G
Sbjct: 578 PSGGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582
HSP 2 Score: 86.3 bits (212), Expect = 1.8e-16
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 14 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPGVSSSKP 73
RYAP+D TLPKPWKGLID TG LY+WNPETNVTQYEKP SLPP P VSSS
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70
Query: 74 TSVSEAHSMPSN 85
++A++ P +
Sbjct: 71 VQQTDAYAPPKD 80
BLAST of Cp4.1LG03g12010 vs. TAIR 10
Match:
AT3G01540.3 (DEAD box RNA helicase 1 )
HSP 1 Score: 652.5 bits (1682), Expect = 6.4e-187
Identity = 353/516 (68.41%), Postives = 404/516 (78.29%), Query Frame = 0
Query: 457 GSGGPPLSNNAL--IGPPHIGASD----------VTNMSPVEVYRQQHEVTATGDNVPSP 516
G GPP SN A +G GA+ + +SP E Y ++HE+T +G VP P
Sbjct: 98 GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157
Query: 517 YMTFEATGFPPEILREASFTIARTSFNWIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKT 576
M+FEATGFPPE+LRE + SAGFS+PTPIQAQ+WPIA+QGRDIVAIAKT
Sbjct: 158 LMSFEATGFPPELLRE------------VLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKT 217
Query: 577 GSGKTLGYLIPAFMLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVCCTCL 636
GSGKTLGYLIP F+ L++ RN+ + GPT+LVL+PTRELATQIQ+EA+KFGRSSR+ CTCL
Sbjct: 218 GSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCL 277
Query: 637 YGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIKFRQISLLVLDEADRMLDMGFEPQ 696
YGGAPKGPQL++LERGADIVVATPGRLNDILEM+ I RQIS LVLDEADRMLDMGFEPQ
Sbjct: 278 YGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 337
Query: 697 IRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVV 756
IRKIV EIP +RQTLMYTATWPK VRKIA DLLVN QVNIG+VDEL ANK+ITQ++EVV
Sbjct: 338 IRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVV 397
Query: 757 PQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSLGRGFGAAAIHGDKSQGERDWV 816
MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL R+L R FGAAAIHGDKSQ ERD V
Sbjct: 398 APMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNV 457
Query: 817 LNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYT 876
LNQFRSG++P+LVATDVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+T
Sbjct: 458 LNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFT 517
Query: 877 FFTEQDWKYAADLIKLLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAVMGGSRW-- 936
FF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG GGM +F SRW
Sbjct: 518 FFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGMNKF------SRWGP 577
Query: 937 DSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 959
SGGRG D G+GGR G F R G+G
Sbjct: 578 PSGGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582
HSP 2 Score: 86.3 bits (212), Expect = 1.8e-16
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 14 RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLGPHPGVSSSKP 73
RYAP+D TLPKPWKGLID TG LY+WNPETNVTQYEKP SLPP P VSSS
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70
Query: 74 TSVSEAHSMPSN 85
++A++ P +
Sbjct: 71 VQQTDAYAPPKD 80
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SQV1 | 1.1e-273 | 54.84 | DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 P... | [more] |
Q9LYJ9 | 1.9e-188 | 61.46 | DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 P... | [more] |
Q8H136 | 9.0e-186 | 68.41 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 P... | [more] |
Q5JKF2 | 1.8e-178 | 59.82 | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
P46942 | 1.0e-176 | 66.80 | ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=... | [more] |
Match Name | E-value | Identity | Description | |
XP_023527087.1 | 0.0 | 98.98 | DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022955621.1 | 0.0 | 97.88 | DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita moschata] | [more] |
KAG7018553.1 | 0.0 | 96.07 | DEAD-box ATP-dependent RNA helicase 40, partial [Cucurbita argyrosperma subsp. a... | [more] |
XP_022955622.1 | 0.0 | 96.52 | DEAD-box ATP-dependent RNA helicase 40-like isoform X2 [Cucurbita moschata] | [more] |
KAG6582152.1 | 0.0 | 96.36 | DEAD-box ATP-dependent RNA helicase 40, partial [Cucurbita argyrosperma subsp. s... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GUA0 | 0.0 | 97.88 | DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=... | [more] |
A0A6J1GU57 | 0.0 | 96.52 | DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=... | [more] |
A0A6J1IRF9 | 0.0 | 95.85 | DEAD-box ATP-dependent RNA helicase 14-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1C7W7 | 0.0 | 87.48 | DEAD-box ATP-dependent RNA helicase 46 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A6J1HIK1 | 0.0 | 87.11 | DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=... | [more] |