Cp4.1LG03g11390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g11390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	flowering-promoting factor 1-like protein 1
Location	Cp4.1LG03: 11037077 .. 11037409 (-)
RNA-Seq Expression	Cp4.1LG03g11390
Synteny	Cp4.1LG03g11390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGCGTTTGGGTGTTCGACAACGGGGTAATCCGGCTCGTGGAGAGGGCGGGGGCGGCGGAGACGGGAGCAGGAGGGCGGAGAAAAGTTCTGATCTACAAACCGACAAACGAGGCGATGACATCATACCCAATACTTAAAAACAAGCTTGCATCGTTAGGCTGGGAAGTATACTACGAAGATTCCGAGGTTATGCAATTCCATAAGCCTTCATCTGTGGATCTCATTTCTATTCCCACAGACTTCAATAAGCTTAAGGCTAGACACTTATACGACATCGTTGTGAAGAATCGTAATGTTTTTCAAGTTAAGGACATGCAATCCCAGTAA

mRNA sequence

ATGTCGGGCGTTTGGGTGTTCGACAACGGGGTAATCCGGCTCGTGGAGAGGGCGGGGGCGGCGGAGACGGGAGCAGGAGGGCGGAGAAAAGTTCTGATCTACAAACCGACAAACGAGGCGATGACATCATACCCAATACTTAAAAACAAGCTTGCATCGTTAGGCTGGGAAGTATACTACGAAGATTCCGAGGTTATGCAATTCCATAAGCCTTCATCTGTGGATCTCATTTCTATTCCCACAGACTTCAATAAGCTTAAGGCTAGACACTTATACGACATCGTTGTGAAGAATCGTAATGTTTTTCAAGTTAAGGACATGCAATCCCAGTAA

Coding sequence (CDS)

ATGTCGGGCGTTTGGGTGTTCGACAACGGGGTAATCCGGCTCGTGGAGAGGGCGGGGGCGGCGGAGACGGGAGCAGGAGGGCGGAGAAAAGTTCTGATCTACAAACCGACAAACGAGGCGATGACATCATACCCAATACTTAAAAACAAGCTTGCATCGTTAGGCTGGGAAGTATACTACGAAGATTCCGAGGTTATGCAATTCCATAAGCCTTCATCTGTGGATCTCATTTCTATTCCCACAGACTTCAATAAGCTTAAGGCTAGACACTTATACGACATCGTTGTGAAGAATCGTAATGTTTTTCAAGTTAAGGACATGCAATCCCAGTAA

Protein sequence

MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ

Homology

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-28
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVER--AGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEV 60
           MSGVWVF NGV+RLVE+  A A    AGGRRK L++ P+ + ++SY  L+ +L +LGWE 
Sbjct: 1   MSGVWVFKNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWER 60

Query: 61  YYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKD 107
           YYED  + QFHK  S+DLIS+P DF+   + H+YDIVVKNR+ F+V D
Sbjct: 61  YYEDPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-28
Identity = 63/110 (57.27%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVE---RAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWE 60
           MSGVWVF+NGVIRLVE   ++G   T + GRR VL+Y PT EA++SY  L+  L SLGWE
Sbjct: 1   MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61  VYYE-DSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKD 107
            Y+  DS+++Q+HK SS+DLIS+P DF+K  + ++YDIVVKN N F V+D
Sbjct: 61  RYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.0e-28
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYKPTNEAMTSYPILKNKLASL 60
           M+GVWVF +G++R VE  G+ E+      G GGRRKVL++ P+ E + SY +L+ +L  L
Sbjct: 1   MAGVWVFKDGIVRRVENPGSEESSSAGDGGGGGRRKVLVHVPSGEVVASYEVLERRLREL 60

Query: 61  GWEVYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKD 107
           GWE Y  D  ++QFH+ S+V LIS+P DF+K K  H+YDIVVK RNVF+V+D
Sbjct: 61  GWERYLTDPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.0e-27
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVF NGVIRLVE    + +    RRKV++Y PT E ++SY  L+  L SLGWE Y+
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYF 60

Query: 61  --EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKD 107
              D++++QFHK SS+DLIS+P DF K  + ++YDIVVKN N F V+D
Sbjct: 61  GGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.2e-27
Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVF NGVIRLVE    +      RRKV++Y PT E ++SY  L+  L SLGWE Y+
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGGDTNSRRKVMVYLPTGEVISSYSTLEQILRSLGWERYF 60

Query: 61  --EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKD 107
              D++++QFHK SS+DLIS+P DF K  + ++YDIVVKN N F V+D
Sbjct: 61  GGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of Cp4.1LG03g11390 vs. NCBI nr
Match: XP_023528953.1 (flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223 bits (569), Expect = 1.48e-73
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60

Query: 61  EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110
           EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ
Sbjct: 61  EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110

[Close]

BLAST of Cp4.1LG03g11390 vs. NCBI nr
Match: XP_022956217.1 (flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018618.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220 bits (561), Expect = 2.45e-72
Identity = 107/110 (97.27%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIY PTNEAMTSYP+LKNKLASLGWEVYY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY 60

Query: 61  EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110
           EDSEVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ
Sbjct: 61  EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110

[Close]

BLAST of Cp4.1LG03g11390 vs. NCBI nr
Match: XP_022979994.1 (flowering-promoting factor 1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 216 bits (549), Expect = 1.66e-70
Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVFDNGVIRLVERAGA ETGAGGRRKVLIY PTNEAMTSY +LKNKLASLGWEVYY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVETGAGGRRKVLIYTPTNEAMTSYSVLKNKLASLGWEVYY 60

Query: 61  EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110
           EDSEVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ
Sbjct: 61  EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110

[Close]

BLAST of Cp4.1LG03g11390 vs. NCBI nr
Match: KGN57101.1 (hypothetical protein Csa_010574 [Cucumis sativus])

HSP 1 Score: 193 bits (491), Expect = 1.29e-61
Identity = 94/112 (83.93%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWE 60
           MSGVW+FDNGVIRLVERAGAAET   G  G+RKVLIY PTNEAMTSY +L+NKL+ LGWE
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60

Query: 61  VYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109
           VYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 112

[Close]

BLAST of Cp4.1LG03g11390 vs. NCBI nr
Match: KAA0049489.1 (flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (481), Expect = 4.75e-60
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYKPTNEAMTSYPILKNKLASL 60
           MSGVW+FDNGVIRLVERAGA ET      G  G+RKVL+Y PTNEAMTSY +L+NKL+ L
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSGKRKVLMYTPTNEAMTSYEVLENKLSML 60

Query: 61  GWEVYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109
           GWEVYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 115

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy TrEMBL
Match: A0A6J1GVQ4 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457977 PE=3 SV=1)

HSP 1 Score: 220 bits (561), Expect = 1.19e-72
Identity = 107/110 (97.27%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIY PTNEAMTSYP+LKNKLASLGWEVYY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY 60

Query: 61  EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110
           EDSEVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ
Sbjct: 61  EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy TrEMBL
Match: A0A6J1IY48 (flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479520 PE=3 SV=1)

HSP 1 Score: 216 bits (549), Expect = 8.05e-71
Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVFDNGVIRLVERAGA ETGAGGRRKVLIY PTNEAMTSY +LKNKLASLGWEVYY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVETGAGGRRKVLIYTPTNEAMTSYSVLKNKLASLGWEVYY 60

Query: 61  EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110
           EDSEVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ
Sbjct: 61  EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy TrEMBL
Match: A0A0A0LAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1)

HSP 1 Score: 193 bits (491), Expect = 6.24e-62
Identity = 94/112 (83.93%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWE 60
           MSGVW+FDNGVIRLVERAGAAET   G  G+RKVLIY PTNEAMTSY +L+NKL+ LGWE
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60

Query: 61  VYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109
           VYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 112

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy TrEMBL
Match: A0A5A7U7L7 (Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23597G00010 PE=3 SV=1)

HSP 1 Score: 189 bits (481), Expect = 2.30e-60
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYKPTNEAMTSYPILKNKLASL 60
           MSGVW+FDNGVIRLVERAGA ET      G  G+RKVL+Y PTNEAMTSY +L+NKL+ L
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSGKRKVLMYTPTNEAMTSYEVLENKLSML 60

Query: 61  GWEVYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109
           GWEVYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQS 115

[Close]

BLAST of Cp4.1LG03g11390 vs. ExPASy TrEMBL
Match: A0A6J1IC95 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111472346 PE=3 SV=1)

HSP 1 Score: 167 bits (424), Expect = 8.48e-52
Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVFDNGVIRL E  G +       R VLIY  TNEAMT+  +LKNKL SLGWE+YY
Sbjct: 1   MSGVWVFDNGVIRLAEGGGGSRNRG---RNVLIYTATNEAMTTLTVLKNKLLSLGWEIYY 60

Query: 61  EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ 110
           ED+E++QFHKPSSVDLIS+PTDFNK+KARHLYD+VV+NRN+F VKDMQSQ
Sbjct: 61  EDAEIVQFHKPSSVDLISLPTDFNKVKARHLYDVVVRNRNLFHVKDMQSQ 107

[Close]

BLAST of Cp4.1LG03g11390 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-29
Identity = 63/110 (57.27%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVE---RAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWE 60
           MSGVWVF+NGVIRLVE   ++G   T + GRR VL+Y PT EA++SY  L+  L SLGWE
Sbjct: 1   MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61  VYYE-DSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKD 107
            Y+  DS+++Q+HK SS+DLIS+P DF+K  + ++YDIVVKN N F V+D
Sbjct: 61  RYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of Cp4.1LG03g11390 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-28
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVYY 60
           MSGVWVF NGVIRLVE    + +    RRKV++Y PT E ++SY  L+  L SLGWE Y+
Sbjct: 1   MSGVWVFKNGVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERYF 60

Query: 61  --EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKD 107
              D++++QFHK SS+DLIS+P DF K  + ++YDIVVKN N F V+D
Sbjct: 61  GGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of Cp4.1LG03g11390 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-24
Identity = 59/124 (47.58%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 1   MSGVWVFD-NGVIRLVER------AGAAETGAGG-------RRKVLIYKPTNEAMTSYPI 60
           MSGVWVF+ NGV+RLVE         ++E+ + G       RRK+L++ P++E ++SY  
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 117

Query: 61  LKNKLASLGWEVYY---EDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQ 108
           L+  L +LGWE YY       ++QFHK +S+DLIS+P DF+K  + H+YDIVVKN NVF 
Sbjct: 118 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 177

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g11390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LGE3	2.1e-28	55.56	Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9LXB5	2.1e-28	57.27	Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
Q0E1D7	8.0e-28	51.79	Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=3...	[more]
O23624	4.0e-27	54.63	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]
O24340	5.2e-27	54.63	Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g11390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528953.1	1.48e-73	100.00	flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022956217.1	2.45e-72	97.27	flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 F...	[more]
XP_022979994.1	1.66e-70	95.45	flowering-promoting factor 1-like protein 1 [Cucurbita maxima]	[more]
KGN57101.1	1.29e-61	83.93	hypothetical protein Csa_010574 [Cucumis sativus]	[more]
KAA0049489.1	4.75e-60	80.00	flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613...	[more]

BLAST of Cp4.1LG03g11390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVQ4	1.19e-72	97.27	flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IY48	8.05e-71	95.45	flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0LAK6	6.24e-62	83.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1	[more]
A0A5A7U7L7	2.30e-60	80.00	Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1IC95	8.48e-52	72.73	flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cp4.1LG03g11390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10625.1	1.5e-29	57.27	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]
AT5G24860.1	2.8e-28	54.63	flowering promoting factor 1	[more]
AT4G31380.1	1.9e-24	47.58	FPF1-like protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..107
None	No IPR available	PANTHER	PTHR33433:SF6	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g11390.1	Cp4.1LG03g11390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development