Cp4.1LG03g09960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG03g09960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	HR-like lesion-inducing protein-related
Location	Cp4.1LG03: 11841944 .. 11844258 (-)
RNA-Seq Expression	Cp4.1LG03g09960
Synteny	Cp4.1LG03g09960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTTCTGCCCATTTATAAGGAACTGTGAGCAATTTCATCGTCCAGCCGGAGGCGAAGAAGTTGCCGATCCACAACAGGGTGAATTGAGAAACATGAGGTTCTTCTCCTTCCTTGGACGGGTCCTCTTTGCTTCCATCTTCATTCTCTCCGCCTGGCAGATGTAAGTTATTCTATTTCTCTATGGTTATCTCATATTCATCTCTCAATCTTCTGATTCATTGGACGTTTAATTAATCCATTCAATCCATATGTATCTTCCGCTTCGAGTCTTCTATCGTTCTAGGGTTTTGTTGCTTGCATTCCCGAATTTTTTGTTTTCTCGTTACTGTTTGTAAATGCGTGATGATTGTGTTGCTGTTGTGTTCTGTTATGGAATTCTGTCTGGCTGAACTTTCTACATATATCTTACGCGCAAGTACTTCAAATGGCCGAGGTTTATTAGGGCACCATCCACTATCCTTTGTTTCGTAGTTTGCGATGGGTTGATGTTTATGAATAATTCCTACATTGTTCGTTTCTCATTTTCATAGAGATTACGGACCATTATATATCTGAAATTTACATTTTCTGGCTTTGGATGAGACTGGAGGACTGAATTAAACCGATTTCATGAGAAGCCATCAGTTTTATTTAATTCCAGGCGTTGGTTAGGATATGAAGAATATAATTACAGGTACATTTATTTCTGTAGGAGATAAAGCTTTGGTTTTATCCTTTTAAACTTGAATCAACTATGTTAAATGAGGGGATAGAAGACAAATTGCATTGAAGATCCCCAATTTTATTTCAATTCTATAGTAATAAACTTGACATTTGATATTGAGCAGAAATGTGGTAGAAATGAACTCCCTTTGAATACTGATTAACAGGGAGAAATTCAACCAACATGGATGGGATAATTCAATTGCCACTGATTGAATTAGCAGTCAATGAGAACCAATGCAACTAGTAAAGAGCTTAGAAAGAATAGGTTCAAGTCATAGTAATCATCACTTAAGTTGAATATTCTATGAATTTTCTTTGCACCGAACCTAATAAGGTTAGGCAGTTGTCTATGAGAGTAGTCGAGGTCTGGTTCAAATACTAACGATATGAAAAAGAAAACAAGGGGAAATCCTGTTGTAAACTTTTCTGTGCAATTTTTCGTGCACATTAGATGTTTTTTTCTTCATCGAATCGTTGAACCAATTGGGTTCCGATCTGCCTTTTACCTCCATGTTCTTATATATAAATATTTTTCGCACTTTCAACAATTCGGTTTCTCATCTAAATGTCAAGGAAAGAGTTTGTCACTCTGTGTTTATAAAGTACATGTATGAATATCTCGAGCAATGCTTTGTTTACCGGATGCACAATTTTTGTGGAAACCATTTTAAAGACTTCACATACATCCATTGCTTAGGTTTAATGAGTTCGGCCATAATGGTGGGCCAGCAGCCGCGGAGTTGTCTCTAAAAGTAGCTGTTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGAGATTGATGTAAGACAATATTTTTCACCTTCAGTGTGGACAATATGAGTCTTCTGTAACTTTTCTTTTTCAAACTTTGATAATTTTCTGCAGGTCAGACACTTGGTTGCCATTTCTTTATCTCTTAAAGGGATTGGAGGCCTTCTGTTTGTTTTTGGCAGCAGAGTTGGAGCTTATCACCTGGTATGGATTCACCATGTTCTTAATTTTAGCCTCAAGAATAAATTTGTTACTCTAAATTTATGCACATCTTTGAAGACTTCTCTTATTGCCTTCTATTTCAGCTTCTGCAATTGGCTATTATCACACCGGTTCTGTATGATTTCTTCAACTATAGCCCTCAGAAACCTAACTTCGATATCCTGTTGTTTAGTGATTTCTTGCAGGTTTGTCCATATTCTTTGTAACTTGTTTTTCCCCATATGGGTTCATATCATTCATCTTAATTTACTAAACCTTATGGAATCTTATTTTCTTTGCAGCACATTGCACTTTTTGGTGCTCTGATTTTCTTCTTAGGGATGAAGACCACAGGTCCAAGGAAGCACTCGAAGAAGAAGACATCTAAAACTAAAACATATTAGATTTGTTGAAGAAGCAACAGTTTGGCGATTGGATTAATTTGCTCTGGCATTCAGTTCTTAGGTATACACATAGTTTCACCATTGGAACAAACAAGTTTTCTACTCTCTTGTAGTTGGGTAGTTTTTTTTTTCTCGAATTACTTTGCTTCATTGTTTGTCTTCTGATGAGTTATTATTCAATTTGAGTGTTGGCATACAGGTCCTTGTAGTTTTGCACCTGTC

mRNA sequence

CGTTTCTGCCCATTTATAAGGAACTGTGAGCAATTTCATCGTCCAGCCGGAGGCGAAGAAGTTGCCGATCCACAACAGGGTGAATTGAGAAACATGAGGTTCTTCTCCTTCCTTGGACGGGTCCTCTTTGCTTCCATCTTCATTCTCTCCGCCTGGCAGATGTTTAATGAGTTCGGCCATAATGGTGGGCCAGCAGCCGCGGAGTTGTCTCTAAAAGTAGCTGTTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGAGATTGATGTCAGACACTTGGTTGCCATTTCTTTATCTCTTAAAGGGATTGGAGGCCTTCTGTTTGTTTTTGGCAGCAGAGTTGGAGCTTATCACCTGCTTCTGCAATTGGCTATTATCACACCGGTTCTGTATGATTTCTTCAACTATAGCCCTCAGAAACCTAACTTCGATATCCTGTTGTTTAGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGATTTTCTTCTTAGGGATGAAGACCACAGGTCCAAGGAAGCACTCGAAGAAGAAGACATCTAAAACTAAAACATATTAGATTTGTTGAAGAAGCAACAGTTTGGCGATTGGATTAATTTGCTCTGGCATTCAGTTCTTAGGTATACACATAGTTTCACCATTGGAACAAACAAGTTTTCTACTCTCTTGTAGTTGGGTAGTTTTTTTTTTCTCGAATTACTTTGCTTCATTGTTTGTCTTCTGATGAGTTATTATTCAATTTGAGTGTTGGCATACAGGTCCTTGTAGTTTTGCACCTGTC

Coding sequence (CDS)

ATGAGGTTCTTCTCCTTCCTTGGACGGGTCCTCTTTGCTTCCATCTTCATTCTCTCCGCCTGGCAGATGTTTAATGAGTTCGGCCATAATGGTGGGCCAGCAGCCGCGGAGTTGTCTCTAAAAGTAGCTGTTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGAGATTGATGTCAGACACTTGGTTGCCATTTCTTTATCTCTTAAAGGGATTGGAGGCCTTCTGTTTGTTTTTGGCAGCAGAGTTGGAGCTTATCACCTGCTTCTGCAATTGGCTATTATCACACCGGTTCTGTATGATTTCTTCAACTATAGCCCTCAGAAACCTAACTTCGATATCCTGTTGTTTAGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGATTTTCTTCTTAGGGATGAAGACCACAGGTCCAAGGAAGCACTCGAAGAAGAAGACATCTAAAACTAAAACATATTAG

Protein sequence

MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEIDVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLFSDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

Homology

[Close]

BLAST of Cp4.1LG03g09960 vs. NCBI nr
Match: XP_023526739.1 (uncharacterized protein LOC111790139 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306 bits (785), Expect = 6.03e-105
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158
           SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG03g09960 vs. NCBI nr
Match: XP_022924237.1 (uncharacterized protein LOC111431764 [Cucurbita moschata])

HSP 1 Score: 299 bits (765), Expect = 6.77e-102
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DVRHLVAISLSLKGIGGLLFVFGSRVGAY LLLQLAIITPVLYDFFNYSPQKP FDILLF
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158
           SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG03g09960 vs. NCBI nr
Match: XP_022979205.1 (uncharacterized protein LOC111479010 [Cucurbita maxima])

HSP 1 Score: 295 bits (756), Expect = 1.59e-100
Identity = 153/158 (96.84%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPA+AEL+LKVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPASAELALKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DVRHLVAISLSLKGIGGLLFVFGSRVGAY LLLQLAIITPVLYDFFNYSPQKP FDILLF
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158
           SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG03g09960 vs. NCBI nr
Match: KAG6582373.1 (Actin-related protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265 bits (677), Expect = 5.60e-88
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVA LRRNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DVRHLVAISLSLKGIGGLLFVFGSRVGAY LLLQLAIITPVLYDFFNYSPQKP FDILLF
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALIFFLGMKTT 142
           SDFLQHIALFGALIFFLGMKTT
Sbjct: 121 SDFLQHIALFGALIFFLGMKTT 142

[Close]

BLAST of Cp4.1LG03g09960 vs. NCBI nr
Match: KAG7018782.1 (hypothetical protein SDJN02_20655 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253 bits (647), Expect = 5.56e-84
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 24  FNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEIDVRHLVAISLSLKGIGGLLFVFG 83
           FNEFGHNGGPAAAELSLKVA LRRNLSSKLGVAIP+IDVRHLVAISLSLKGIGGLLFVFG
Sbjct: 19  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFG 78

Query: 84  SRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLFSDFLQHIALFGALIFFLGMKTTG 143
           SRVGAY LLLQLAIITPVLYDFFNYSPQKP FDILLFSDFLQHIALFGALIFFLGMKTTG
Sbjct: 79  SRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDFLQHIALFGALIFFLGMKTTG 138

Query: 144 PRKHSKKKTSKTKTY 158
           PRKHSKKKTSKTKTY
Sbjct: 139 PRKHSKKKTSKTKTY 153

[Close]

BLAST of Cp4.1LG03g09960 vs. ExPASy TrEMBL
Match: A0A6J1E8C2 (uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC111431764 PE=4 SV=1)

HSP 1 Score: 299 bits (765), Expect = 3.28e-102
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DVRHLVAISLSLKGIGGLLFVFGSRVGAY LLLQLAIITPVLYDFFNYSPQKP FDILLF
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158
           SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG03g09960 vs. ExPASy TrEMBL
Match: A0A6J1ISL2 (uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 7.72e-101
Identity = 153/158 (96.84%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPA+AEL+LKVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPASAELALKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DVRHLVAISLSLKGIGGLLFVFGSRVGAY LLLQLAIITPVLYDFFNYSPQKP FDILLF
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158
           SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG03g09960 vs. ExPASy TrEMBL
Match: A0A6J1FRE6 (uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC111447492 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 1.70e-81
Identity = 134/158 (84.81%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           M FFSFLGRVLFASIFILSAWQMFNEF +NGG AAAELS KVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DV HLVAISLSLKGIGGLLFVFGS VGAY LLLQLAIITPVLYDFFN+SPQ P F ILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILL- 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158
           SDFLQHIALFGAL+FFL MK T P++  KKK  KTKTY
Sbjct: 121 SDFLQHIALFGALLFFLEMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG03g09960 vs. ExPASy TrEMBL
Match: A0A6J1ID53 (uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 2.82e-80
Identity = 133/158 (84.18%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           M FFSFLGRVLFASIFILSAWQMFNEF +NGG AAA LS KVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DV HLVAISLSLKGIGGLLFVFGS VGAY LLLQLAIITPVLYDFFN+S QKP F ILL 
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILL- 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158
            DFLQHIALFGAL+FFLGMK T P++  KKK  KTKTY
Sbjct: 121 GDFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG03g09960 vs. ExPASy TrEMBL
Match: A0A1S3AXB3 (uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483616 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 4.15e-80
Identity = 132/159 (83.02%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           M FFSF GR+LFAS FILSAWQMFNEFG+NGGPAAAELS KVAVLRRNLSSKL VAIP+I
Sbjct: 1   MGFFSFFGRLLFASFFILSAWQMFNEFGNNGGPAAAELSSKVAVLRRNLSSKLAVAIPDI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           DVRHLVA+SLSLKGIGGLLFVFGSRVGAY LLL LAIITPVL+DFFN+S QKPNF I L 
Sbjct: 61  DVRHLVALSLSLKGIGGLLFVFGSRVGAYLLLLHLAIITPVLFDFFNFSLQKPNFGIPL- 120

Query: 121 SDFLQHIALFGALIFFLGMK-TTGPRKHSKKKTSKTKTY 158
           SDFLQHIALFGAL+FFLGMK TT P+K  KKKT K K +
Sbjct: 121 SDFLQHIALFGALLFFLGMKSTTSPKKPLKKKTQKAKAH 158

[Close]

BLAST of Cp4.1LG03g09960 vs. TAIR 10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-43
Identity = 91/157 (57.96%), Postives = 123/157 (78.34%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           M FFSFLGRVLFAS+FILSAWQMFN+    GGPAA EL+ K+ +++ +LSS+LGV +P+I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFND----GGPAAKELAPKLDLVKAHLSSRLGVTLPKI 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           +VR +VA  ++LKG+GGLLFV G+  GAY L   L +  P+LYDF+NY PQ+ +F +LL 
Sbjct: 61  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLL- 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGP-RKHSKKKTSKTK 157
           ++FLQ +ALFGAL+FF+GMK + P +K+ KK+T K K
Sbjct: 121 TEFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPK 152

[Close]

BLAST of Cp4.1LG03g09960 vs. TAIR 10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 171.0 bits (432), Expect = 7.6e-43
Identity = 88/158 (55.70%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           M FFSFLGRVLFAS+FILSAWQMFN+FG +GGPAA EL+ K+ + + +LSS LGV++P +
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           +V+ +V   ++LKG+GGLLFV G+  GAY L + L +++P+LYDF+NY P+   F +LL 
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLL- 120

Query: 121 SDFLQHIALFGALIFFLGMK--TTGPRKHSKKKTSKTK 157
           ++FLQ +AL GAL+FF+GMK  TT  ++  KK+T K K
Sbjct: 121 TEFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPK 157

[Close]

BLAST of Cp4.1LG03g09960 vs. TAIR 10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-35
Identity = 80/159 (50.31%), Postives = 106/159 (66.67%), Query Frame = 0


Query: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60
           M   SFLGR LF S+F+LSAWQ FN+FG +GG +A  L  K      ++++  G  +P +
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILLF 120
           D++ LVA +++LKGIGGLLFVFGS +GAY LLL  A+ TP+LYDF+NY   +  F   LF
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFG-QLF 120

Query: 121 SDFLQHIALFGALIFFLGMKTTGPRKHS---KKKTSKTK 157
           S F Q +AL G L+FF+GMK +  RKH    +KK  K K
Sbjct: 121 SKFTQSLALLGGLLFFIGMKNS--RKHGRQLRKKAPKAK 156

[Close]

BLAST of Cp4.1LG03g09960 vs. TAIR 10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 68.2 bits (165), Expect = 6.9e-12
Identity = 42/120 (35.00%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 8   GRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEIDVRHLVA 67
           GRV+FAS F++SAW+ +  F    G AA EL  K+                E   + +VA
Sbjct: 25  GRVVFASAFLVSAWREYYGF----GLAADELRPKLGFF-------------ENQAKAIVA 84

Query: 68  ISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDILL--FSDFLQ 126
           + + +K +GG+LF+F + VGA  LL+  AI++P+LYDF+N    + +F +    F +F++
Sbjct: 85  LGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKEFVE 127

[Close]

BLAST of Cp4.1LG03g09960 vs. TAIR 10
Match: AT3G23180.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 7   LGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEIDVRHLV 66
           +GR LFAS F LS+W  + E   N                   S K G +  +I  +HL+
Sbjct: 24  IGRALFASSFFLSSWHDYMELKANWNGT-----------EDYWSPKFGYSGDQI--KHLM 83

Query: 67  AISLSLKGIGGLLFVFGSRVGAYHLLLQLAIITPVLYDFFNYSPQKPNFDIL 119
            +S+ ++ +GGL+F++GS  GA+ LL+   I T V +DF+N+      F +L
Sbjct: 84  TVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLL 122

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g09960 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g09960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526739.1	6.03e-105	100.00	uncharacterized protein LOC111790139 [Cucurbita pepo subsp. pepo]	[more]
XP_022924237.1	6.77e-102	98.73	uncharacterized protein LOC111431764 [Cucurbita moschata]	[more]
XP_022979205.1	1.59e-100	96.84	uncharacterized protein LOC111479010 [Cucurbita maxima]	[more]
KAG6582373.1	5.60e-88	97.18	Actin-related protein 9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7018782.1	5.56e-84	97.04	hypothetical protein SDJN02_20655 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG03g09960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8C2	3.28e-102	98.73	uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC1114317...	[more]
A0A6J1ISL2	7.72e-101	96.84	uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010...	[more]
A0A6J1FRE6	1.70e-81	84.81	uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC1114474...	[more]
A0A6J1ID53	2.82e-80	84.18	uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025...	[more]
A0A1S3AXB3	4.15e-80	83.02	uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG03g09960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43460.1	2.0e-43	57.96	HR-like lesion-inducing protein-related	[more]
AT1G04340.1	7.6e-43	55.70	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	2.6e-35	50.31	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	6.9e-12	35.00	HR-like lesion-inducing protein-related	[more]
AT3G23180.1	4.2e-09	33.04	HR-like lesion-inducing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 1..139 e-value: 3.5E-49 score: 166.5
None	No IPR available	PANTHER	PTHR31474:SF4	BNAA10G27800D PROTEIN	coord: 1..157
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 1..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g09960.1	Cp4.1LG03g09960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane