Cp4.1LG01g16720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGACAGAATGAAAGAGAGAGAGAGAGAAAAAGTAAAGAAAAAGTTTCGCCTCTTCTCTTTCTATTTCTCTATCCATTGAGAGAGTCTCTGAGATGCCAAAGCCATGTCGGATCCTCCGACAACATCATCGGAGCCACCGCATCAGCAGCAGCAGCAGCACCCCCACCACTACCACCACCAACAACAACAACTCCTACATTTGCCGCTAATCCATGGCGGCGGCGCCCGAATCAACACAGCAGCAGCAAACTCCTCCTCCACAGTAATAGTCCGAGAGTACCGCAAAGGAAACTGGACACTCCAAGAGACAATGATTCTAATAACCGCCAAAAAGCTAGACGACGAGAGACGGAACAAGGTAACCTTAGCTCCTCCGACGGATCCAACAGCCAGAAAGGGCGGTGAGCTACGGTGGAAATGGGTCGAAAACTACTGCTGGAGCCACGGATGTCACCGTAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTCCTCCGCGACTACAAAAAAGTCCGCGACTACGAATCCCGCGCGTGTGACCAACAATCCCAAATTCCCTCTTACTGGAAAATGGAGAAACACGAGCGTAAGGACAACAATCTTCCTTCCAATATGGCGTTTGAAGTTTATCAAGCCTTAAACGACGTCGTCCACAGAAAGTTCTCTCAAAGACCTCTTATTTCCAATACTACCCCTACTACTACTACTACTACTACTACTACTACTACTACTCCTACTACTCCTCTTGTTGCTCTTCCACCAGCTCCGCCTCCTTCCTCCACCGTCCCCGCCCTTCCCCCACCACCACCCACGACGGCGACCAATTCCTCCCCGGCGGTTTCAGGTGAGTCTGTTTTGTTTTTGTTCTTTTGTGCGTGATACTATTAAAATCGTCCCCCCCAAGTCCTGGACCTTTCATTTACTAAAAATAAATAAATAAATAAAATTCTTTTTTTATAATTTTATTTAAAAAAAAAAAAAAAGGAGAGAGAAAAGAGTTAATATTTTGGGTCAAAGTTGCAGGGTTTGACTCTGCCACAAATTTTAATAGGACCCTCTCCCGTATTCTTCTTCCTTTTCATTTCGTTATTCCTTTTCTAATCCCCTACGCTCACCTTCATGGCTTTACAATGCACCCTCCAAATCTCACCCTTCGATTGCATTACTCCATCAACTCATCCAACGGTTGGGATTTGGGGTAGAATTCGAAATTGTAAAAGCTGGGGGGCAACACTGATAAATAATGTATAATATTGGGAATGGAGAAAGACAATGATGAAATTGTGGTGATGAGATTGAGATCGTGGGGAGATCCTTTTGGGTATCTAAAATAATAATAATAATAATAATACAAATCCCCTTTTAAGGTTAATATTAAATTATATATATATATATATATATATATATTTTAATTTTAAGATACGATAATACAATATGGTCCCTTCAATCTAAGCATGCAATGCAAAACTCACTTTTCAGCCTTTCCATAATTAAATATTATGCAAAAAAAATAAAAATAAAAATAAAATAAAAAATAAAACCTAGCTCTTGAATTTTTTTTTTTTTTTTTTTTTTCAGTATTATATGTTTATTAATTACTCGGGTTTCTATGACTTAAAAGCTCGACTAACTTGGACTATCCAACTCAAAGTGTCATGTTTTGTTTTAGTTTGAGTTGACTTGCTTAGTTCATAGGTTGACATATCAACTCAAAGTGTTATATTTTGTTTTAGTTTGAGTTGACTTACTTAGTTCATGGGTTGACTTATTTTGTTCAAGTCAATCGGACCATCCAAAAATAGGGTTATAACAAAACCAAATCAGATTTTTCACGTTCAAGTCAACCCAATCTGTCAGGTTTAAGTCACCAATCCGATCAATTCGAAATTTCAGAGTTGGTTTAAGAGATTAACTCAATTCAATTTGTATATACTTTTAGTTGATTAATTATGACGAGAAAAATTGGTAATTAATTGTGTGTGTGTAGAGTCATCCTCATCGGGGACGGAGTCGAGCGAGAAGAAAGAGAAGACGAAGGCAAAGAGGAGGAAAATGGAAGATAATATTGTGAGAAGCGCTACGATGTTAGCTCAAACGCTGCGGAGCTGCGAGGAACAAAGGGAGATCCGACACCAAGAGGTTATGGAGGTTCAAAAACGTTGCCTTCAAATCGAAGAAGCGCGCAACCACATTCACCGCCAAGGGATTAGCGACGTCGTGGCTGCCATCGCCAACCTCTCGGCTGGTATGAATACTCCTTATTCGTATTCCCATGCATGGGCATGCAAGCGTTTTTGCTTACAAAATAAGATTGTGAGTACAGAAATAGATGATAGAGAAAGAAGAAGAAGGTCGGAAGGATATGAATGTTCATACAATGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAAGCAATGCAAGCTGAGGTTATGAATGTGAAGACTGAGCTTTCCCAACTTAGAGACCAAATGCCATCTCTCATGCAAACCATGATGCACAATATGCTCCACAACATCCCTCCTCCTCCTCCTCCTTCCATGGTACTCTCTCTCTCTCTCTTCCTCTCTCGATTCATTCGCATAATCACGATCGTAAAATCTAATAGTATAGAGATCATCACGTTAATTGTGTTTTATGGTATGGATAGAGATAGAGCGGATGTAATGGCTCAAGCCCACCACTAGCAGATATTGTCATCTTTGAGCTTTTCTTTCGAGCTTACCCTCAAGGTTTTTAAAACGAGTAAGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTCTCATGATCCACCCCCCTTCAGAGCCCAACATTCTCAAATGCTTCGTTCCCCTCTCCAATCTATGTAGTATCTCACAATTTATCCCCCTTCAGAGCCCAACATCCTCACTAGCACACCACCTAATGTCTGGCTCTGATACCATTTGTAACCGCCTAAGCCTACTGATAGTAGATATTGTACTCTTTAGATTTTCTCTTTCGGGCTTACTCTCAAGGTCTTTAAAACGCATTTGCTGGGGAGAGGTTTTCATACCCTTATAAGGGGTGTTTCTTTCTCCTCTCCAATCTATGTGGTATCTCACAATCCACCCCCTCTTCAGAGCCCAACATCCTCGCTAGCACACCGCCTGGTGTGTCTGGCTCTGATACCATTTGTAACAGTCTAAGTCAGATATTGTCCTCTTGGGGTTTTCTCTTTCGGGCTTACTCTCAAAGTTTTTAAAACGCGTTTGATAGGGAGAGGTTTCCACACCCTTATAAAGTATGTTTCTTTCTCCTCTCTAACCAATGTGGAATCTCAGAACAGAGATGAAAAAGTGGGATGGACAATGGTCTCGTTCTTAGGTTAAAAAGTTAATGATAAAATTATTGACCCGAGACGTAATTAAAGTGATAATGCATGTTTTGATCATTAATATATGATTTGATATATATTTTTGTTTGTTTTTGTGTGCATAGGACCCATCTGGATCGGGGGGAGATGCTTAGAAAGGATTCTCGACCGTAACGATTGATTATTAATTTAAATAAAAATATTTTAGTAGAATTTATTATTGTTTCATGTGGAATTTAATGATTTTGTAAAACTTATTTAATATAATTTATTATTATTAATTTTTTGAGTGAATCCTTTAATTAGTTCAGTTTGGTAAACATAAAATCTAGAATTGCCTCCTTACTCGAT TAAGACAGAATGAAAGAGAGAGAGAGAGAAAAAGTAAAGAAAAAGTTTCGCCTCTTCTCTTTCTATTTCTCTATCCATTGAGAGAGTCTCTGAGATGCCAAAGCCATGTCGGATCCTCCGACAACATCATCGGAGCCACCGCATCAGCAGCAGCAGCAGCACCCCCACCACTACCACCACCAACAACAACAACTCCTACATTTGCCGCTAATCCATGGCGGCGGCGCCCGAATCAACACAGCAGCAGCAAACTCCTCCTCCACAGTAATAGTCCGAGAGTACCGCAAAGGAAACTGGACACTCCAAGAGACAATGATTCTAATAACCGCCAAAAAGCTAGACGACGAGAGACGGAACAAGGTAACCTTAGCTCCTCCGACGGATCCAACAGCCAGAAAGGGCGGTGAGCTACGGTGGAAATGGGTCGAAAACTACTGCTGGAGCCACGGATGTCACCGTAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTCCTCCGCGACTACAAAAAAGTCCGCGACTACGAATCCCGCGCGTGTGACCAACAATCCCAAATTCCCTCTTACTGGAAAATGGAGAAACACGAGCGTAAGGACAACAATCTTCCTTCCAATATGGCGTTTGAAGTTTATCAAGCCTTAAACGACGTCGTCCACAGAAAGTTCTCTCAAAGACCTCTTATTTCCAATACTACCCCTACTACTACTACTACTACTACTACTACTACTACTACTCCTACTACTCCTCTTGTTGCTCTTCCACCAGCTCCGCCTCCTTCCTCCACCGTCCCCGCCCTTCCCCCACCACCACCCACGACGGCGACCAATTCCTCCCCGGCGGTTTCAGAGTCATCCTCATCGGGGACGGAGTCGAGCGAGAAGAAAGAGAAGACGAAGGCAAAGAGGAGGAAAATGGAAGATAATATTGTGAGAAGCGCTACGATGTTAGCTCAAACGCTGCGGAGCTGCGAGGAACAAAGGGAGATCCGACACCAAGAGGTTATGGAGGTTCAAAAACGTTGCCTTCAAATCGAAGAAGCGCGCAACCACATTCACCGCCAAGGGATTAGCGACGTCGTGGCTGCCATCGCCAACCTCTCGGCTGGTATGAATACTCCTTATTCGTATTCCCATGCATGGGCATGCAAGCGTTTTTGCTTACAAAATAAGATTGTGAGTACAGAAATAGATGATAGAGAAAGAAGAAGAAGGTCGGAAGGATATGAATGTTCATACAATGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAAGCAATGCAAGCTGAGGTTATGAATGTGAAGACTGAGCTTTCCCAACTTAGAGACCAAATGCCATCTCTCATGCAAACCATGATGCACAATATGCTCCACAACATCCCTCCTCCTCCTCCTCCTTCCATGGACCCATCTGGATCGGGGGGAGATGCTTAGAAAGGATTCTCGACCGTAACGATTGATTATTAATTTAAATAAAAATATTTTAGTAGAATTTATTATTGTTTCATGTGGAATTTAATGATTTTGTAAAACTTATTTAATATAATTTATTATTATTAATTTTTTGAGTGAATCCTTTAATTAGTTCAGTTTGGTAAACATAAAATCTAGAATTGCCTCCTTACTCGAT ATGTCGGATCCTCCGACAACATCATCGGAGCCACCGCATCAGCAGCAGCAGCAGCACCCCCACCACTACCACCACCAACAACAACAACTCCTACATTTGCCGCTAATCCATGGCGGCGGCGCCCGAATCAACACAGCAGCAGCAAACTCCTCCTCCACAGTAATAGTCCGAGAGTACCGCAAAGGAAACTGGACACTCCAAGAGACAATGATTCTAATAACCGCCAAAAAGCTAGACGACGAGAGACGGAACAAGGTAACCTTAGCTCCTCCGACGGATCCAACAGCCAGAAAGGGCGGTGAGCTACGGTGGAAATGGGTCGAAAACTACTGCTGGAGCCACGGATGTCACCGTAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTCCTCCGCGACTACAAAAAAGTCCGCGACTACGAATCCCGCGCGTGTGACCAACAATCCCAAATTCCCTCTTACTGGAAAATGGAGAAACACGAGCGTAAGGACAACAATCTTCCTTCCAATATGGCGTTTGAAGTTTATCAAGCCTTAAACGACGTCGTCCACAGAAAGTTCTCTCAAAGACCTCTTATTTCCAATACTACCCCTACTACTACTACTACTACTACTACTACTACTACTACTCCTACTACTCCTCTTGTTGCTCTTCCACCAGCTCCGCCTCCTTCCTCCACCGTCCCCGCCCTTCCCCCACCACCACCCACGACGGCGACCAATTCCTCCCCGGCGGTTTCAGAGTCATCCTCATCGGGGACGGAGTCGAGCGAGAAGAAAGAGAAGACGAAGGCAAAGAGGAGGAAAATGGAAGATAATATTGTGAGAAGCGCTACGATGTTAGCTCAAACGCTGCGGAGCTGCGAGGAACAAAGGGAGATCCGACACCAAGAGGTTATGGAGGTTCAAAAACGTTGCCTTCAAATCGAAGAAGCGCGCAACCACATTCACCGCCAAGGGATTAGCGACGTCGTGGCTGCCATCGCCAACCTCTCGGCTGGTATGAATACTCCTTATTCGTATTCCCATGCATGGGCATGCAAGCGTTTTTGCTTACAAAATAAGATTGTGAGTACAGAAATAGATGATAGAGAAAGAAGAAGAAGGTCGGAAGGATATGAATGTTCATACAATGGAGAAGAGGTGAGAATGTTGAAAGAACAAAATGAAGCAATGCAAGCTGAGGTTATGAATGTGAAGACTGAGCTTTCCCAACTTAGAGACCAAATGCCATCTCTCATGCAAACCATGATGCACAATATGCTCCACAACATCCCTCCTCCTCCTCCTCCTTCCATGGACCCATCTGGATCGGGGGGAGATGCTTAG MSDPPTTSSEPPHQQQQQHPHHYHHQQQQLLHLPLIHGGGARINTAAANSSSTVIVREYRKGNWTLQETMILITAKKLDDERRNKVTLAPPTDPTARKGGELRWKWVENYCWSHGCHRSQNQCNDKWDNLLRDYKKVRDYESRACDQQSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDVVHRKFSQRPLISNTTPTTTTTTTTTTTTPTTPLVALPPAPPPSSTVPALPPPPPTTATNSSPAVSESSSSGTESSEKKEKTKAKRRKMEDNIVRSATMLAQTLRSCEEQREIRHQEVMEVQKRCLQIEEARNHIHRQGISDVVAAIANLSAGMNTPYSYSHAWACKRFCLQNKIVSTEIDDRERRRRSEGYECSYNGEEVRMLKEQNEAMQAEVMNVKTELSQLRDQMPSLMQTMMHNMLHNIPPPPPPSMDPSGSGGDA Homology
BLAST of Cp4.1LG01g16720 vs. ExPASy Swiss-Prot
Match: Q8VZ20 (Trihelix transcription factor ASR3 OS=Arabidopsis thaliana OX=3702 GN=ASR3 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.0e-12 Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. NCBI nr
Match: KAG7032408.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 789 bits (2038), Expect = 2.14e-286 Identity = 424/451 (94.01%), Postives = 429/451 (95.12%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. NCBI nr
Match: XP_023513279.1 (trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 775 bits (2000), Expect = 4.59e-281 Identity = 416/442 (94.12%), Postives = 416/442 (94.12%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. NCBI nr
Match: KAG6601648.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 705 bits (1819), Expect = 2.87e-253 Identity = 389/440 (88.41%), Postives = 396/440 (90.00%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. NCBI nr
Match: XP_022997995.1 (trihelix transcription factor ASR3-like [Cucurbita maxima]) HSP 1 Score: 694 bits (1790), Expect = 3.56e-249 Identity = 382/451 (84.70%), Postives = 390/451 (86.47%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. NCBI nr
Match: XP_022957219.1 (trihelix transcription factor ASR3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 685 bits (1767), Expect = 2.05e-245 Identity = 376/424 (88.68%), Postives = 383/424 (90.33%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. ExPASy TrEMBL
Match: A0A6J1KBG1 (trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111492779 PE=4 SV=1) HSP 1 Score: 694 bits (1790), Expect = 1.72e-249 Identity = 382/451 (84.70%), Postives = 390/451 (86.47%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. ExPASy TrEMBL
Match: A0A6J1H1B6 (trihelix transcription factor ASR3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458675 PE=4 SV=1) HSP 1 Score: 685 bits (1767), Expect = 9.90e-246 Identity = 376/424 (88.68%), Postives = 383/424 (90.33%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. ExPASy TrEMBL
Match: A0A6J1GZY0 (trihelix transcription factor ASR3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458675 PE=4 SV=1) HSP 1 Score: 671 bits (1732), Expect = 1.46e-240 Identity = 367/424 (86.56%), Postives = 374/424 (88.21%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. ExPASy TrEMBL
Match: A0A1S3C482 (trihelix transcription factor PTL-like OS=Cucumis melo OX=3656 GN=LOC103496697 PE=4 SV=1) HSP 1 Score: 536 bits (1380), Expect = 2.27e-187 Identity = 318/455 (69.89%), Postives = 344/455 (75.60%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. ExPASy TrEMBL
Match: A0A6J1DSG1 (trihelix transcription factor ASR3-like OS=Momordica charantia OX=3673 GN=LOC111023888 PE=4 SV=1) HSP 1 Score: 485 bits (1249), Expect = 1.56e-167 Identity = 294/454 (64.76%), Postives = 321/454 (70.70%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. TAIR 10
Match: AT1G31310.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 183.0 bits (463), Expect = 5.4e-46 Identity = 140/375 (37.33%), Postives = 191/375 (50.93%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. TAIR 10
Match: AT2G35640.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 180.3 bits (456), Expect = 3.5e-45 Identity = 123/329 (37.39%), Postives = 189/329 (57.45%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. TAIR 10
Match: AT2G33550.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 7.1e-14 Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 0
BLAST of Cp4.1LG01g16720 vs. TAIR 10
Match: AT4G31270.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 56.6 bits (135), Expect = 5.8e-08 Identity = 27/81 (33.33%), Postives = 47/81 (58.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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