Cp4.1LG01g12870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor MYB1R1
Location	Cp4.1LG01: 8542296 .. 8543956 (+)
RNA-Seq Expression	Cp4.1LG01g12870
Synteny	Cp4.1LG01g12870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCACCATAGAGAAATGGAATAAAGAAAGGGCCTTGAAAGAATGGTGGCTAACTCGGCTTGTATATGAACCCAAAGAAGTTGGCTTTTTAGCTTTTCCGATCCACTTTTTCGCCTTTTGGTTTCTTCCACTTCCAGATTCCCGTGCTTTCTCTTGTCAGACCCTTTTTATTGTTTTCTTACCCTTCTCCCTGCAGCCTTTACTTTAGACTCGACATGAACGCCCCTCGCACGTGTTCGCTTTGTGGCAACAATGGCCATAACTCCCGCACGTGTCCGGAGGGAGACGGCGGCGGTGCCAGCGGCGCCGGCGGATTCATGTTGTTCGGGGTCAGGCTGACCACGACCGAGGGAAGTAGCTCGTTTAGAAAGAGTGTTAGTATGAATAATCTGTCCCAGTTCGACCAGCCTCTAAGTCAGGACTCCAACAACGCCGATGCCGGATATGCTTCAGACGACGTCGTTCATCCATCCGACCGTTGCCGCAGCCGAAAAAGAGGTTTTTTTTTTTTTTTTTTTAATTTTATTTTACTTATTTAATTTTGATTTTGATTTTTGTAGCTAATTTGGATGTGGGTTTGATTTTTCATAGGGATTCCGTGGACAGAGGAAGAACATCGGCTGTTCTTGTTGGGATTACAGAAGGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTGGCTAGTCATGCTCAGAAATACTTCCTCCGCCGGAATAATTTCAATCGGAGACGCCGTAGATCCAGCCTTTTCGACATCACCACTGACACTGTAAGTCCCTTGTCTTGTTCAGAATCCTGTTTGTTTGTTAATTTGATTGATTTATTATTATTATTATTATTTCCATTTAATTTGAATTGAAGTTCCCGAGCTCATCCATGGAAGACGATTTGGTATTTTCCGGCCACGAGGCTCTGCCGCCACCGTTACCACCATCGCAGCCGCTAAAAGACAACAAACCCGGAAATTTCCTACTCAAAATTCATCCAGTGAAACCACTTCCTCCCGCCGGCGATGACAACAACGCCGAGAACACAATCAGTTCCAAAATCCTTCGTCCAATACCAATGCTTCCTCTGTCTCCATACCCAAAATTCGCTCAATTAAACATTAACGACAGAACGCCGGAAGACCCTTTGCCTCTGACTTTGAAGCTCTCTACTTCACACCCGGAGGCACAGTCTCCGACAGCGGCTTCACAGTCGTCCAGCAATTTCCAGACAATGTCCGGCGGCGGAGACAGTATCGACATTGTCAGTGTTGCTTGAAGCTGATCCTGAATTGTTGGGGGCTTAGATATAAGAATAACTGGTCGGATTTAATTGGACAGCGTATAAAAAAGGATTCCAGGTTTGTTTTGTACAGGTGAAATTTTAAATTTAATTGGTCCAAAAAAAGTGATATAAATTTCAATAATGGTTGTATTTGGATTTGTTTTTAGAATCGTTGTGTTAATGTTCATATAATTTAATTTTATTGTAGAAATGAATTAATGCGTTAATTTTCAGCATAACTCGAAATATTTAGAGCATATGGTTCAGTAAGTTAGTAGACGACAAGAATATGAGTGTGGGCATCAAGCTATTGCTTTCTCGACTTGTCGTTTTGCTTCCATGTGCCCATGGATGAATC

mRNA sequence

GCTCACCATAGAGAAATGGAATAAAGAAAGGGCCTTGAAAGAATGGTGGCTAACTCGGCTTGTATATGAACCCAAAGAAGTTGGCTTTTTAGCTTTTCCGATCCACTTTTTCGCCTTTTGGTTTCTTCCACTTCCAGATTCCCGTGCTTTCTCTTGTCAGACCCTTTTTATTGTTTTCTTACCCTTCTCCCTGCAGCCTTTACTTTAGACTCGACATGAACGCCCCTCGCACGTGTTCGCTTTGTGGCAACAATGGCCATAACTCCCGCACGTGTCCGGAGGGAGACGGCGGCGGTGCCAGCGGCGCCGGCGGATTCATGTTGTTCGGGGTCAGGCTGACCACGACCGAGGGAAGTAGCTCGTTTAGAAAGAGTGTTAGTATGAATAATCTGTCCCAGTTCGACCAGCCTCTAAGTCAGGACTCCAACAACGCCGATGCCGGATATGCTTCAGACGACGTCGTTCATCCATCCGACCGTTGCCGCAGCCGAAAAAGAGGGATTCCGTGGACAGAGGAAGAACATCGGCTGTTCTTGTTGGGATTACAGAAGGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTGGCTAGTCATGCTCAGAAATACTTCCTCCGCCGGAATAATTTCAATCGGAGACGCCGTAGATCCAGCCTTTTCGACATCACCACTGACACTTTCCCGAGCTCATCCATGGAAGACGATTTGGTATTTTCCGGCCACGAGGCTCTGCCGCCACCGTTACCACCATCGCAGCCGCTAAAAGACAACAAACCCGGAAATTTCCTACTCAAAATTCATCCAGTGAAACCACTTCCTCCCGCCGGCGATGACAACAACGCCGAGAACACAATCAGTTCCAAAATCCTTCGTCCAATACCAATGCTTCCTCTGTCTCCATACCCAAAATTCGCTCAATTAAACATTAACGACAGAACGCCGGAAGACCCTTTGCCTCTGACTTTGAAGCTCTCTACTTCACACCCGGAGGCACAGTCTCCGACAGCGGCTTCACAGTCGTCCAGCAATTTCCAGACAATGTCCGGCGGCGGAGACAGTATCGACATTGTCAGTGTTGCTTGAAGCTGATCCTGAATTGTTGGGGGCTTAGATATAAGAATAACTGGTCGGATTTAATTGGACAGCGTATAAAAAAGGATTCCAGGTTTGTTTTGTACAGGTGAAATTTTAAATTTAATTGGTCCAAAAAAAGTGATATAAATTTCAATAATGGTTGTATTTGGATTTGTTTTTAGAATCGTTGTGTTAATGTTCATATAATTTAATTTTATTGTAGAAATGAATTAATGCGTTAATTTTCAGCATAACTCGAAATATTTAGAGCATATGGTTCAGTAAGTTAGTAGACGACAAGAATATGAGTGTGGGCATCAAGCTATTGCTTTCTCGACTTGTCGTTTTGCTTCCATGTGCCCATGGATGAATC

Coding sequence (CDS)

ATGAACGCCCCTCGCACGTGTTCGCTTTGTGGCAACAATGGCCATAACTCCCGCACGTGTCCGGAGGGAGACGGCGGCGGTGCCAGCGGCGCCGGCGGATTCATGTTGTTCGGGGTCAGGCTGACCACGACCGAGGGAAGTAGCTCGTTTAGAAAGAGTGTTAGTATGAATAATCTGTCCCAGTTCGACCAGCCTCTAAGTCAGGACTCCAACAACGCCGATGCCGGATATGCTTCAGACGACGTCGTTCATCCATCCGACCGTTGCCGCAGCCGAAAAAGAGGGATTCCGTGGACAGAGGAAGAACATCGGCTGTTCTTGTTGGGATTACAGAAGGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTGGCTAGTCATGCTCAGAAATACTTCCTCCGCCGGAATAATTTCAATCGGAGACGCCGTAGATCCAGCCTTTTCGACATCACCACTGACACTTTCCCGAGCTCATCCATGGAAGACGATTTGGTATTTTCCGGCCACGAGGCTCTGCCGCCACCGTTACCACCATCGCAGCCGCTAAAAGACAACAAACCCGGAAATTTCCTACTCAAAATTCATCCAGTGAAACCACTTCCTCCCGCCGGCGATGACAACAACGCCGAGAACACAATCAGTTCCAAAATCCTTCGTCCAATACCAATGCTTCCTCTGTCTCCATACCCAAAATTCGCTCAATTAAACATTAACGACAGAACGCCGGAAGACCCTTTGCCTCTGACTTTGAAGCTCTCTACTTCACACCCGGAGGCACAGTCTCCGACAGCGGCTTCACAGTCGTCCAGCAATTTCCAGACAATGTCCGGCGGCGGAGACAGTATCGACATTGTCAGTGTTGCTTGA

Protein sequence

MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA

Homology

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BLAST of Cp4.1LG01g12870 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.6e-49
Identity = 136/304 (44.74%), Postives = 173/304 (56.91%), Query Frame = 0


Query: 17  SRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQPLSQDSNNA--- 76
           S + P   GGG  G    MLFGVR+         RKSVS+N+LSQ++ P + ++NN    
Sbjct: 9   SSSTPAVTGGGFGGE--IMLFGVRVKV----DPMRKSVSLNDLSQYEHPNANNNNNGGDN 68

Query: 77  --------DAGYAS--DDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISR 136
                   D GYAS  D V H S+  R RKRG+PWTEEEH+LFLLGLQKVGKGDWRGISR
Sbjct: 69  NESSKVAQDEGYASADDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISR 128

Query: 137 NFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHEALP 196
           NFVKTRTPTQVASHAQKYFLRR+N NRRRRRSSLFDITTD+     +E+       + +P
Sbjct: 129 NFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSVMPIEE---VENKQEIP 188

Query: 197 PPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAE--------NTISSKILRPIPMLP 256
              P + P            + P+  + P   D + E        +  SS ++ P+PM  
Sbjct: 189 VVAPATLPTTKTNAFPVAPTVGPI--IFPVQIDKSREYPTLLRHDHGNSSMLVGPVPMFS 248

Query: 257 LSPYPKFA-QLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDI 299
           + P P  A  LN N  +  +P  L+L+LS S  + Q   A+S   S +  MS   +   I
Sbjct: 249 M-PNPSTAIDLNANHNSTIEPSSLSLRLSLSLDQGQ---ASSTRHSAYNVMSSFSNGESI 297

[Close]

BLAST of Cp4.1LG01g12870 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-42
Identity = 97/174 (55.75%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQF-- 64
           R CS C +NGHNSRTCP           G  LFGVRLT      S RKS SM NLS +  
Sbjct: 3   RRCSHCNHNGHNSRTCPN---------RGVKLFGVRLT----EGSIRKSASMGNLSHYTG 62

Query: 65  -------------DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLG 124
                          P     + A  GYAS+D V  S   R RK+G PWTEEEHR+FLLG
Sbjct: 63  SGSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSRERKKGTPWTEEEHRMFLLG 122

Query: 125 LQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTD 164
           LQK+GKGDWRGISRN+V TRTPTQVASHAQKYF+R++N +RR+RRSSLFD+  D
Sbjct: 123 LQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPD 163

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BLAST of Cp4.1LG01g12870 vs. ExPASy Swiss-Prot
Match: Q7XC57 (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-42
Identity = 105/199 (52.76%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQFDQ 64
           R CS C +NGHNSRTCP           G  +FGVRLT      S RKS SM NLS    
Sbjct: 3   RRCSHCSHNGHNSRTCPN---------RGVKIFGVRLT----DGSIRKSASMGNLSLLSS 62

Query: 65  PLSQDSNNA------DA------GYASDDVVH-PSDRCRSRKRGIPWTEEEHRLFLLGLQ 124
                S  A      DA      GYASDD V   S   R RK+G+PWTEEEHR FLLGLQ
Sbjct: 63  AAGSTSGGASPADGPDAAPTAADGYASDDFVQGSSSATRDRKKGVPWTEEEHRRFLLGLQ 122

Query: 125 KVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPS---- 184
           K+GKGDWRGISRNFV +RTPTQVASHAQKYF+R++N  RR+RRSSLFD+  D        
Sbjct: 123 KLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRRSSLFDMVPDESMDLPPL 182

Query: 185 -SSMEDDLVFSGHEALPPP 186
               E +       ALPPP
Sbjct: 183 PGGQEPETQVLNQPALPPP 188

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BLAST of Cp4.1LG01g12870 vs. ExPASy Swiss-Prot
Match: Q9FKF9 (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.9e-34
Identity = 83/174 (47.70%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTT----TEGSSSFRKSVSMNNLS 64
           +TCS CG+NGHN+RTC  G            LFGV +++        ++ RKS+S+ NL 
Sbjct: 10  KTCSHCGHNGHNARTCLNG-----VNKASVKLFGVNISSDPIRPPEVTALRKSLSLGNL- 69

Query: 65  QFDQPLSQDSNNA---------DAGYASDDVVH--PSDRCRSRKRGIPWTEEEHRLFLLG 124
             D  L+ D +N          D GY SD  +H         +K+G PWTEEEHR FL+G
Sbjct: 70  --DALLANDESNGSGDPIAAVDDTGYHSDGQIHSKKGKTAHEKKKGKPWTEEEHRNFLIG 129

Query: 125 LQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTD 164
           L K+GKGDWRGI+++FV TRTPTQVASHAQKYF+R N  ++R+RR+SLFDI+ +
Sbjct: 130 LNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRASLFDISLE 175

[Close]

BLAST of Cp4.1LG01g12870 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 90  RSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFN 149
           + R++GIPWTEEEHRLFLLGL K GKGDWR ISRNFV +RTPTQVASHAQKYF+R N+ N
Sbjct: 136 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 195

Query: 150 RRRRRSSLFDITTDTFPSS-SMEDDLVFSGHEALPPP 186
           R RRRSS+ DIT+ T     + +     +GH+A   P
Sbjct: 196 RDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNP 232

[Close]

BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: XP_023513813.1 (transcription factor MYB1R1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 589 bits (1518), Expect = 4.89e-212
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS
Sbjct: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60

Query: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120
           QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG
Sbjct: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120

Query: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180
           ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE
Sbjct: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180

Query: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240
           ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP
Sbjct: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240

Query: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298
           KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA
Sbjct: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298

[Close]

BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: XP_022956453.1 (transcription factor MYB1R1 [Cucurbita moschata])

HSP 1 Score: 582 bits (1500), Expect = 2.71e-209
Identity = 294/298 (98.66%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS
Sbjct: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60

Query: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120
           QFDQPLSQDSNNADAGYASDDVVHPSDRCR RKRGIPWTEEEHRLFLLGLQKVGKGDWRG
Sbjct: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRGRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120

Query: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180
           ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE
Sbjct: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180

Query: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240
           ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDD+NAENTISSKILRPIPMLPLSPYP
Sbjct: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDSNAENTISSKILRPIPMLPLSPYP 240

Query: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298
           KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSS +FQTMSGGGDSIDIVSVA
Sbjct: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSGSFQTMSGGGDSIDIVSVA 298

[Close]

BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: KAG7032168.1 (Transcription factor KUA1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 581 bits (1498), Expect = 2.40e-208
Identity = 293/298 (98.32%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS
Sbjct: 41  MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 100

Query: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120
           QFDQPLSQDSNNADAGYASDDVVHPSDRCR RKRGIPWTEEEHRLFLLGLQKVGKGDWRG
Sbjct: 101 QFDQPLSQDSNNADAGYASDDVVHPSDRCRGRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 160

Query: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180
           ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE
Sbjct: 161 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 220

Query: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240
           ALPPPLPPSQPLKDNKPGNFLLKIHP+KPLPP GDD+NAENTISSKILRPIPMLPLSPYP
Sbjct: 221 ALPPPLPPSQPLKDNKPGNFLLKIHPMKPLPPTGDDSNAENTISSKILRPIPMLPLSPYP 280

Query: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298
           KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSS NFQTMSGGGDSIDIVSVA
Sbjct: 281 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSGNFQTMSGGGDSIDIVSVA 338

[Close]

BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: KAG6601390.1 (Transcription factor KUA1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 581 bits (1498), Expect = 4.66e-208
Identity = 293/298 (98.32%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS
Sbjct: 59  MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 118

Query: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120
           QFDQPLSQDSNNADAGYASDDVVHPSDRCR RKRGIPWTEEEHRLFLLGLQKVGKGDWRG
Sbjct: 119 QFDQPLSQDSNNADAGYASDDVVHPSDRCRGRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 178

Query: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180
           ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE
Sbjct: 179 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 238

Query: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240
           ALPPPLPPSQPLKDNKPGNFLLKIHP+KPLPP GDD+NAENTISSKILRPIPMLPLSPYP
Sbjct: 239 ALPPPLPPSQPLKDNKPGNFLLKIHPMKPLPPTGDDSNAENTISSKILRPIPMLPLSPYP 298

Query: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298
           KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSS NFQTMSGGGDSIDIVSVA
Sbjct: 299 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSGNFQTMSGGGDSIDIVSVA 356

[Close]

BLAST of Cp4.1LG01g12870 vs. NCBI nr
Match: XP_022991605.1 (transcription factor MYB1R1-like [Cucurbita maxima])

HSP 1 Score: 555 bits (1429), Expect = 1.61e-198
Identity = 285/298 (95.64%), Postives = 287/298 (96.31%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MNAPRTCSLCGNNGHNSRTCPEGDGGG    GGFMLFGVRLTTTEGSSSFRKSVSMNNLS
Sbjct: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGG---GGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60

Query: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120
           QFDQPLSQDSNNADAGYASDDVVHPSDRCR RKRGIPWTEEEHRLFLLGLQKVGKGDWRG
Sbjct: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRGRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120

Query: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180
           ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTF SSSMEDDLVFSGHE
Sbjct: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFTSSSMEDDLVFSGHE 180

Query: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240
           AL PPLPPSQ LKD+KPGNFLLKIHPVKP P AGDD+NAENTISSKILRPIPMLPLSPYP
Sbjct: 181 ALQPPLPPSQLLKDSKPGNFLLKIHPVKPPPAAGDDSNAENTISSKILRPIPMLPLSPYP 240

Query: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298
           KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSS NFQTMSGGGDSIDIVSVA
Sbjct: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSGNFQTMSGGGDSIDIVSVA 295

[Close]

BLAST of Cp4.1LG01g12870 vs. ExPASy TrEMBL
Match: A0A6J1GWW1 (transcription factor MYB1R1 OS=Cucurbita moschata OX=3662 GN=LOC111458182 PE=4 SV=1)

HSP 1 Score: 582 bits (1500), Expect = 1.31e-209
Identity = 294/298 (98.66%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS
Sbjct: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60

Query: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120
           QFDQPLSQDSNNADAGYASDDVVHPSDRCR RKRGIPWTEEEHRLFLLGLQKVGKGDWRG
Sbjct: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRGRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120

Query: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180
           ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE
Sbjct: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180

Query: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240
           ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDD+NAENTISSKILRPIPMLPLSPYP
Sbjct: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDSNAENTISSKILRPIPMLPLSPYP 240

Query: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298
           KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSS +FQTMSGGGDSIDIVSVA
Sbjct: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSGSFQTMSGGGDSIDIVSVA 298

[Close]

BLAST of Cp4.1LG01g12870 vs. ExPASy TrEMBL
Match: A0A6J1JTE9 (transcription factor MYB1R1-like OS=Cucurbita maxima OX=3661 GN=LOC111488166 PE=4 SV=1)

HSP 1 Score: 555 bits (1429), Expect = 7.80e-199
Identity = 285/298 (95.64%), Postives = 287/298 (96.31%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MNAPRTCSLCGNNGHNSRTCPEGDGGG    GGFMLFGVRLTTTEGSSSFRKSVSMNNLS
Sbjct: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGG---GGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60

Query: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120
           QFDQPLSQDSNNADAGYASDDVVHPSDRCR RKRGIPWTEEEHRLFLLGLQKVGKGDWRG
Sbjct: 61  QFDQPLSQDSNNADAGYASDDVVHPSDRCRGRKRGIPWTEEEHRLFLLGLQKVGKGDWRG 120

Query: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGHE 180
           ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTF SSSMEDDLVFSGHE
Sbjct: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFTSSSMEDDLVFSGHE 180

Query: 181 ALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPMLPLSPYP 240
           AL PPLPPSQ LKD+KPGNFLLKIHPVKP P AGDD+NAENTISSKILRPIPMLPLSPYP
Sbjct: 181 ALQPPLPPSQLLKDSKPGNFLLKIHPVKPPPAAGDDSNAENTISSKILRPIPMLPLSPYP 240

Query: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSNFQTMSGGGDSIDIVSVA 298
           KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSS NFQTMSGGGDSIDIVSVA
Sbjct: 241 KFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSGNFQTMSGGGDSIDIVSVA 295

[Close]

BLAST of Cp4.1LG01g12870 vs. ExPASy TrEMBL
Match: A0A0A0KQE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604000 PE=4 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 3.91e-157
Identity = 246/318 (77.36%), Postives = 259/318 (81.45%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTT-EGSSSFRKSVSMNNL 60
           MN  RTCSLCGNNGHNSRTCPE DG       GFMLFGVRLTTT +GS+SFRKS SMNNL
Sbjct: 1   MNVSRTCSLCGNNGHNSRTCPEADG-----TTGFMLFGVRLTTTSDGSNSFRKSFSMNNL 60

Query: 61  SQF-DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDW 120
           SQ+ D P SQDSN+ADAGYASDDVVHPSDR   RKRGIPWTEEEHRLFLLGLQKVGKGDW
Sbjct: 61  SQYADHPPSQDSNHADAGYASDDVVHPSDRSGGRKRGIPWTEEEHRLFLLGLQKVGKGDW 120

Query: 121 RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSG 180
           RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITT TF SSS EDDL+FSG
Sbjct: 121 RGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTSSSKEDDLIFSG 180

Query: 181 HEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAG------DDNNAENTIS-------- 240
           HEA  PPLPPS P KDN PGNF +KIH  KP PPA       D    E+T++        
Sbjct: 181 HEATQPPLPPSTPQKDNTPGNFSVKIHQAKP-PPAAVASGVVDSKAVESTLTLNSSNYPA 240

Query: 241 ----SKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSS 298
               SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLPLTLKLSTS  E QSP AASQSS 
Sbjct: 241 KPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLPLTLKLSTSQSEGQSPAAASQSSG 300

[Close]

BLAST of Cp4.1LG01g12870 vs. ExPASy TrEMBL
Match: A0A5A7SYS1 (Transcription factor MYB1R1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00580 PE=4 SV=1)

HSP 1 Score: 439 bits (1130), Expect = 3.77e-153
Identity = 241/317 (76.03%), Postives = 255/317 (80.44%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MN  RTCSLCGNNGHNSRTCPE DG      GGFMLFGVRLTT+EGS+SFRKSVSMNNLS
Sbjct: 1   MNVSRTCSLCGNNGHNSRTCPEADG-----TGGFMLFGVRLTTSEGSNSFRKSVSMNNLS 60

Query: 61  QF-DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWR 120
           Q+ + P  QDSN+ADAGYASDDVVHPSDRC  RKRGIPWTEEEHRLFLLGLQKVGKGDWR
Sbjct: 61  QYAEHPPIQDSNHADAGYASDDVVHPSDRCGGRKRGIPWTEEEHRLFLLGLQKVGKGDWR 120

Query: 121 GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGH 180
           GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITT TF SSS ED       
Sbjct: 121 GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTSSSKED------- 180

Query: 181 EALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAG------DDNNAENTIS--------- 240
           EA+ PPLPPS P KDN PGNF +KIH  KP PPA       D     +T++         
Sbjct: 181 EAMQPPLPPSPPQKDNTPGNFSVKIHAAKP-PPASVVSGVVDSKAVVSTLTLNSSNYRGK 240

Query: 241 ---SKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSN 298
              SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLPLTLKLSTSH E QSP AASQSS +
Sbjct: 241 PCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLPLTLKLSTSHSEGQSPAAASQSSGS 300

[Close]

BLAST of Cp4.1LG01g12870 vs. ExPASy TrEMBL
Match: A0A1S3BE68 (transcription factor MYB1R1 OS=Cucumis melo OX=3656 GN=LOC103489055 PE=4 SV=1)

HSP 1 Score: 439 bits (1130), Expect = 3.77e-153
Identity = 241/317 (76.03%), Postives = 255/317 (80.44%), Query Frame = 0


Query: 1   MNAPRTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLS 60
           MN  RTCSLCGNNGHNSRTCPE DG      GGFMLFGVRLTT+EGS+SFRKSVSMNNLS
Sbjct: 1   MNVSRTCSLCGNNGHNSRTCPEADG-----TGGFMLFGVRLTTSEGSNSFRKSVSMNNLS 60

Query: 61  QF-DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWR 120
           Q+ + P  QDSN+ADAGYASDDVVHPSDRC  RKRGIPWTEEEHRLFLLGLQKVGKGDWR
Sbjct: 61  QYAEHPPIQDSNHADAGYASDDVVHPSDRCGGRKRGIPWTEEEHRLFLLGLQKVGKGDWR 120

Query: 121 GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLVFSGH 180
           GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITT TF SSS ED       
Sbjct: 121 GISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTSSSKED------- 180

Query: 181 EALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAG------DDNNAENTIS--------- 240
           EA+ PPLPPS P KDN PGNF +KIH  KP PPA       D     +T++         
Sbjct: 181 EAMQPPLPPSPPQKDNTPGNFSVKIHAAKP-PPASVVSGVVDSKAVVSTLTLNSSNYRGK 240

Query: 241 ---SKILRPIPMLPLSPYPKFAQLNINDRTPEDPLPLTLKLSTSHPEAQSPTAASQSSSN 298
              SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLPLTLKLSTSH E QSP AASQSS +
Sbjct: 241 PCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLPLTLKLSTSHSEGQSPAAASQSSGS 300

[Close]

BLAST of Cp4.1LG01g12870 vs. TAIR 10
Match: AT1G70000.1 (myb-like transcription factor family protein )

HSP 1 Score: 239.2 bits (609), Expect = 4.3e-63
Identity = 160/306 (52.29%), Postives = 181/306 (59.15%), Query Frame = 0


Query: 5   RTCSLCGNNGHNSRTCP--------EGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSM 64
           R+CS CGNNGHNSRTCP          D GG  G    MLFGVR+T    SS FRKSVSM
Sbjct: 3   RSCSQCGNNGHNSRTCPTDITTTGDNNDKGG--GEKAIMLFGVRVTEA-SSSCFRKSVSM 62

Query: 65  NNLSQFDQPLSQDSN-NADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGK 124
           NNLSQFDQ  + D N   D GYASDDVVH S R R RKRG PWTEEEHRLFL GL KVGK
Sbjct: 63  NNLSQFDQ--TPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGK 122

Query: 125 GDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLV 184
           GDWRGISRNFVKTRTPTQVASHAQKYFLRR N NRRRRRSSLFDIT D+F  SS E++  
Sbjct: 123 GDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSSKEEN-- 182

Query: 185 FSGHEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPM-L 244
                 L  PL                                       +++RP+P+ +
Sbjct: 183 -----QLQTPL---------------------------------------ELIRPVPIPI 242

Query: 245 PLSPYPKFAQLNIN-DRTP--EDPLPLTLKL-----STSHPEAQSPTAASQSSSNFQTMS 293
           P+ P  K A LN+N  +TP   +  PL+L L     STS    +     S++SS F+ MS
Sbjct: 243 PIPPSRKMADLNLNKKKTPATTEMFPLSLNLQRPSSSTSSSSNEQKARGSRASSGFEAMS 257

[Close]

BLAST of Cp4.1LG01g12870 vs. TAIR 10
Match: AT1G70000.2 (myb-like transcription factor family protein )

HSP 1 Score: 239.2 bits (609), Expect = 4.3e-63
Identity = 160/306 (52.29%), Postives = 181/306 (59.15%), Query Frame = 0


Query: 5   RTCSLCGNNGHNSRTCP--------EGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSM 64
           R+CS CGNNGHNSRTCP          D GG  G    MLFGVR+T    SS FRKSVSM
Sbjct: 3   RSCSQCGNNGHNSRTCPTDITTTGDNNDKGG--GEKAIMLFGVRVTEA-SSSCFRKSVSM 62

Query: 65  NNLSQFDQPLSQDSN-NADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLGLQKVGK 124
           NNLSQFDQ  + D N   D GYASDDVVH S R R RKRG PWTEEEHRLFL GL KVGK
Sbjct: 63  NNLSQFDQ--TPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGK 122

Query: 125 GDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTDTFPSSSMEDDLV 184
           GDWRGISRNFVKTRTPTQVASHAQKYFLRR N NRRRRRSSLFDIT D+F  SS E++  
Sbjct: 123 GDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSSKEEN-- 182

Query: 185 FSGHEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAGDDNNAENTISSKILRPIPM-L 244
                 L  PL                                       +++RP+P+ +
Sbjct: 183 -----QLQTPL---------------------------------------ELIRPVPIPI 242

Query: 245 PLSPYPKFAQLNIN-DRTP--EDPLPLTLKL-----STSHPEAQSPTAASQSSSNFQTMS 293
           P+ P  K A LN+N  +TP   +  PL+L L     STS    +     S++SS F+ MS
Sbjct: 243 PIPPSRKMADLNLNKKKTPATTEMFPLSLNLQRPSSSTSSSSNEQKARGSRASSGFEAMS 257

[Close]

BLAST of Cp4.1LG01g12870 vs. TAIR 10
Match: AT5G47390.1 (myb-like transcription factor family protein )

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-43
Identity = 97/174 (55.75%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 5   RTCSLCGNNGHNSRTCPEGDGGGASGAGGFMLFGVRLTTTEGSSSFRKSVSMNNLSQF-- 64
           R CS C +NGHNSRTCP           G  LFGVRLT      S RKS SM NLS +  
Sbjct: 3   RRCSHCNHNGHNSRTCPN---------RGVKLFGVRLT----EGSIRKSASMGNLSHYTG 62

Query: 65  -------------DQPLSQDSNNADAGYASDDVVHPSDRCRSRKRGIPWTEEEHRLFLLG 124
                          P     + A  GYAS+D V  S   R RK+G PWTEEEHR+FLLG
Sbjct: 63  SGSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSSSSRERKKGTPWTEEEHRMFLLG 122

Query: 125 LQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTD 164
           LQK+GKGDWRGISRN+V TRTPTQVASHAQKYF+R++N +RR+RRSSLFD+  D
Sbjct: 123 LQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDMVPD 163

[Close]

BLAST of Cp4.1LG01g12870 vs. TAIR 10
Match: AT1G74840.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 8.4e-43
Identity = 114/244 (46.72%), Postives = 139/244 (56.97%), Query Frame = 0


Query: 35  MLFGVRLTTTEGSSSFRKSVSMNNLSQFDQPL-----------SQDSNNADAGYASDDVV 94
           MLFGVR+         RK VS+NNLS ++Q              QD N   AGYAS D  
Sbjct: 25  MLFGVRVVL----DPMRKCVSLNNLSDYEQTAETPKIDGEDRDEQDMNKTPAGYASADEA 84

Query: 95  HP---SDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQK 154
            P   S+    RKRG+PWTEEEH+LFLLGLQ+VGKGDW+GISRNFVKTRT TQVASHAQK
Sbjct: 85  LPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQK 144

Query: 155 YFLRRNNFNRRRRRSSLFDITTDT-FPSSSMEDDLVFSGHEALPPPLPPSQPLKDNKPGN 214
           YFLRR+N NRRRRRSSLFD+TTDT  P       L+         P+P        +  N
Sbjct: 145 YFLRRSNLNRRRRRSSLFDMTTDTVIPMEEDHQVLIQENTSQSSSPVP--------EINN 204

Query: 215 FLLKIHPVKPL-----PPAGDDNNAENTISSKILRPIPM------LPLSPYPKFAQLNIN 253
           F   IHPV  +      P G+ +  + T SS ++  +P+       PLS     A  N+N
Sbjct: 205 F--SIHPVMQVFPEFPVPTGNQSYGQLT-SSNLINLVPLTFQSSPAPLSLNLSLASSNLN 253

[Close]

BLAST of Cp4.1LG01g12870 vs. TAIR 10
Match: AT3G16350.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-42
Identity = 109/229 (47.60%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 5   RTCSLCGNNGHNSRTCP---------EGDGGGASGAGG------FMLFGVRLTTTEGSSS 64
           R CS C NNGHNSRTCP          G GGG  G GG        LFGVRLT     S 
Sbjct: 3   RRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLT---DGSI 62

Query: 65  FRKSVSMNNLSQF------------------------DQPLSQDSN----NADAGYASDD 124
            +KS SM NLS                          D PLS  +     + + GY SDD
Sbjct: 63  IKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSDD 122

Query: 125 VVH---PSDRCRSRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHA 184
             H    S R   RKRG+PWTEEEHRLFL+GLQK+GKGDWRGISRN+V +RTPTQVASHA
Sbjct: 123 PAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHA 182

Query: 185 QKYFLRRNNFNRRRRRSSLFDITTDTF--PSSSMEDDLVFSGHEALPPP 186
           QKYF+R  + +RR+RRSSLFD+ TD     SS  +++   +G      P
Sbjct: 183 QKYFIRHTSSSRRKRRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEP 228

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V9B0	7.6e-49	44.74	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9LVS0	3.1e-42	55.75	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]
Q7XC57	3.1e-42	52.76	Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=...	[more]
Q9FKF9	6.9e-34	47.70	Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g6...	[more]
B8A9B2	3.7e-27	62.89	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]

BLAST of Cp4.1LG01g12870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513813.1	4.89e-212	100.00	transcription factor MYB1R1 [Cucurbita pepo subsp. pepo]	[more]
XP_022956453.1	2.71e-209	98.66	transcription factor MYB1R1 [Cucurbita moschata]	[more]
KAG7032168.1	2.40e-208	98.32	Transcription factor KUA1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601390.1	4.66e-208	98.32	Transcription factor KUA1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022991605.1	1.61e-198	95.64	transcription factor MYB1R1-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g12870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWW1	1.31e-209	98.66	transcription factor MYB1R1 OS=Cucurbita moschata OX=3662 GN=LOC111458182 PE=4 S...	[more]
A0A6J1JTE9	7.80e-199	95.64	transcription factor MYB1R1-like OS=Cucurbita maxima OX=3661 GN=LOC111488166 PE=...	[more]
A0A0A0KQE3	3.91e-157	77.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604000 PE=4 SV=1	[more]
A0A5A7SYS1	3.77e-153	76.03	Transcription factor MYB1R1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BE68	3.77e-153	76.03	transcription factor MYB1R1 OS=Cucumis melo OX=3656 GN=LOC103489055 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g12870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70000.1	4.3e-63	52.29	myb-like transcription factor family protein	[more]
AT1G70000.2	4.3e-63	52.29	myb-like transcription factor family protein	[more]
AT5G47390.1	2.2e-43	55.75	myb-like transcription factor family protein	[more]
AT1G74840.1	8.4e-43	46.72	Homeodomain-like superfamily protein	[more]
AT3G16350.1	1.1e-42	47.60	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 94..144 e-value: 1.5E-9 score: 47.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 90..142 score: 7.410119
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 97..141 e-value: 9.26862E-10 score: 51.4222
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 97..141 e-value: 1.6E-10 score: 41.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 90..146 score: 16.037415
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 93..144 e-value: 4.5E-17 score: 60.1
None	No IPR available	GENE3D	1.10.10.60		coord: 96..148 e-value: 1.7E-14 score: 55.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	PANTHER	PTHR12374:SF69	KIN2	coord: 48..298
None	No IPR available	PANTHER	PTHR12374	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	coord: 48..298
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 98..146 score: 11.095315
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 7..22 score: 8.910993
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 91..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12870.1	Cp4.1LG01g12870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009889	regulation of biosynthetic process
biological_process	GO:0080090	regulation of primary metabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009739	response to gibberellin
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding