Cp4.1LG01g12280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Son of sevenless
Location	Cp4.1LG01: 8890276 .. 8892362 (-)
RNA-Seq Expression	Cp4.1LG01g12280
Synteny	Cp4.1LG01g12280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTTTCCTTTGTTCGTTACTCTTTCTTTGGTATCAAAAGCGGCCGTCGTTCATACGGTGGATTGTACATATGCAAAAAAAAGGTTCGAAGCGAACCAGTTTTTTGCTATAGTTCGTAAAATATGGAATCGTCTTCTCCTCACGTATGCTTCGGCGTGTCTTGCGATTGTTGGTTGTCTTACCATGTTCTTGGTCCTGCTTGGTGCCGTTTGCAGTACTCTTTACGCACTAGCGTTTTCGCCTGATCTAATTGTATTTGCTGCCGTGATCGTAGGGCTTATCTTCTCTGTTATTTTTGCTAATGCTGTTATCATCTGCAACATATCCATTGTTATCTGTGTGTTGGAAGACATTGCAGGACCTGGGGCATTGCTTCGATCGTGTGTTCTTATTAGGGGTCAGACTCAAGTGGGTCTTTTGATATTTCTGGTATCTACAATCGGGACTGTGTTTGTGGAGGGCTTGTTTGAGCATAGGGTTAAGACGCTGAGCTATGGAGATGGGTCGTCCAGGATATGGGAAGGCCCTCTTTTGGTGGTTATGTATTCATTTGTTGTTCTTACTGATTCAATGATGAATGCAGTTTTTTACTTCAGCTGCAGATCTTCAAGTATGGCGATATCAAATGGTGAACAAGATTCAACTTTGGATATGCCAGTTTCTGATGAATCAACCGGTATTCTTTGATTTTATAGCTTCATAGATTGATTATACACACGTCTTCCATTGTTGATGGATACTTCATAGAAATGGATATATATTGCTACATTGATCAAGCCTAAGATGTGAAGAATCACAGAAATGCTTGGAAAACTTTGGTTGATTAGTTTTCTAGTGCTAGAGGCATACTCAGTGACTATTTATAGAATGTAAAACAACCATTTGGTGGTATGAGAAACGATGTTGTGCAGTAGATAGTTGAAGAGAAGTAGTGACCAACTTAGGATGTTCATTTGGAAAAACGCATTAAGATCCCAATGAAGATGTGGGATTTTGGCGAAATGTGCATTAGAGGCCGCTGTTTATGTTCTATGATATGATATTGTTCATTTTGGCCGCCAATTATGTTCTATGATATGATATTGTTCACTTTGGACAGCATTTCTGCATCTGCTTGTTCTGGAACATGTTATTAAGACTGTTCGAGGTGCGGCTTCCAACTTTTCTCCACTTAAATTGCTTTTATTTTGTTCTAATTTCTTCAGTTGGCTTGATGCACTTGCTGTTCTTCTTTCCTTTTTTCTCAAATATTAGGATGATGTGATATGAGATTTGGTTCAATGAGAACAGCTTAGTAAAACTTACAGATTATCTATGCATTCTGAGGTGTGTTCTTCACCATTTATTCAAAGTATACTCATGTGTTCCAATATCCCATGATTCCTATCAACTAAAGTTTAATGCTAATATCACCATTTCGTACATTTTTGAGATCTGGGATTTTGTTCCTACACATCTGTGAATCAAGTGTCGGTTTTGTTCCTGAATCTGTGGGAACATAGGACTGTTGTTTGAGATTTGAGTACTACAGATTCTAGAACATCGCCCTACCGTCAGCATCGACAGACGATGACGACGGTGTGGCGTTTAGCATCAACGATCAGCGAACAACAAGAATGGGGAAAGGTGAGAGTGGAGGGATGATGAAAAAGAAAGGAGGGAGAATGAACTTGGCCACTACAACCTCCCATAACCAAATTTTCTAGCCATCAATGTCTAGTGAACTAAAAATGTCGGTGTTGAAACTTCATGGACGAAAAAGACGTCAATTCCTTCGATCAAGAGATCATCGTAGGTGGGCTTCATATCGAATACGAGCATGAAGGAAGCCCACCATCAATCCTATCACATATACTTTTGGGCCACAGGTTCGAGCACACAAATTCGACGACCCAAATATCTTCAAACAATGGAGATGGACGACGAGATTAAGAAAATATACAACAGCACTGTACTCTGCAACAGACAGAAGAGAGCGCGTGAATGTAAATCCCAAAGAAGGAGATGAAACGAAACTGGAAAGAGATGCGAACTCCGGGGACGAACTGAACTGTGAGATTAGGAAACGCAATGGAGACCGTTAG

mRNA sequence

ATGTGCTTTCCTTTGTTCGTTACTCTTTCTTTGGTATCAAAAGCGGCCGTCGTTCATACGGTGGATTGTACATATGCAAAAAAAAGGTTCGAAGCGAACCAGTTTTTTGCTATAGTTCGTAAAATATGGAATCGTCTTCTCCTCACGTATGCTTCGGCGTGTCTTGCGATTGTTGGTTGTCTTACCATGTTCTTGGTCCTGCTTGGTGCCGTTTGCAGTACTCTTTACGCACTAGCGTTTTCGCCTGATCTAATTGTATTTGCTGCCGTGATCGTAGGGCTTATCTTCTCTGTTATTTTTGCTAATGCTGTTATCATCTGCAACATATCCATTGTTATCTGTGTGTTGGAAGACATTGCAGGACCTGGGGCATTGCTTCGATCGTGTGTTCTTATTAGGGGTCAGACTCAAGTGGGTCTTTTGATATTTCTGGTATCTACAATCGGGACTGTGTTTGTGGAGGGCTTGTTTGAGCATAGGGTTAAGACGCTGAGCTATGGAGATGGGTCGTCCAGGATATGGGAAGGCCCTCTTTTGGTGGTTATGTATTCATTTGTTGTTCTTACTGATTCAATGATGAATGCAGTTTTTTACTTCAGCTGCAGATCTTCAAGTATGGCGATATCAAATGGTGAACAAGATTCAACTTTGGATATGCCAGTTTCTGATGAATCAACCGCATTTCTGCATCTGCTTGTTCTGGAACATGTTATTAAGACTGTTCGAGATTCTAGAACATCGCCCTACCGTCAGCATCGACAGACGATGACGACGGTGTGGCGTTTAGCATCAACGATCAGCGAACAACAAGAATGGGGAAAGGTTCGAGCACACAAATTCGACGACCCAAATATCTTCAAACAATGGAGATGGACGACGAGATTAAGAAAATATACAACAGCACTGTACTCTGCAACAGACAGAAGAGAGCGCGTGAATGTAAATCCCAAAGAAGGAGATGAAACGAAACTGGAAAGAGATGCGAACTCCGGGGACGAACTGAACTGTGAGATTAGGAAACGCAATGGAGACCGTTAG

Coding sequence (CDS)

ATGTGCTTTCCTTTGTTCGTTACTCTTTCTTTGGTATCAAAAGCGGCCGTCGTTCATACGGTGGATTGTACATATGCAAAAAAAAGGTTCGAAGCGAACCAGTTTTTTGCTATAGTTCGTAAAATATGGAATCGTCTTCTCCTCACGTATGCTTCGGCGTGTCTTGCGATTGTTGGTTGTCTTACCATGTTCTTGGTCCTGCTTGGTGCCGTTTGCAGTACTCTTTACGCACTAGCGTTTTCGCCTGATCTAATTGTATTTGCTGCCGTGATCGTAGGGCTTATCTTCTCTGTTATTTTTGCTAATGCTGTTATCATCTGCAACATATCCATTGTTATCTGTGTGTTGGAAGACATTGCAGGACCTGGGGCATTGCTTCGATCGTGTGTTCTTATTAGGGGTCAGACTCAAGTGGGTCTTTTGATATTTCTGGTATCTACAATCGGGACTGTGTTTGTGGAGGGCTTGTTTGAGCATAGGGTTAAGACGCTGAGCTATGGAGATGGGTCGTCCAGGATATGGGAAGGCCCTCTTTTGGTGGTTATGTATTCATTTGTTGTTCTTACTGATTCAATGATGAATGCAGTTTTTTACTTCAGCTGCAGATCTTCAAGTATGGCGATATCAAATGGTGAACAAGATTCAACTTTGGATATGCCAGTTTCTGATGAATCAACCGCATTTCTGCATCTGCTTGTTCTGGAACATGTTATTAAGACTGTTCGAGATTCTAGAACATCGCCCTACCGTCAGCATCGACAGACGATGACGACGGTGTGGCGTTTAGCATCAACGATCAGCGAACAACAAGAATGGGGAAAGGTTCGAGCACACAAATTCGACGACCCAAATATCTTCAAACAATGGAGATGGACGACGAGATTAAGAAAATATACAACAGCACTGTACTCTGCAACAGACAGAAGAGAGCGCGTGAATGTAAATCCCAAAGAAGGAGATGAAACGAAACTGGAAAGAGATGCGAACTCCGGGGACGAACTGAACTGTGAGATTAGGAAACGCAATGGAGACCGTTAG

Protein sequence

MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGCLTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIAGPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLVVMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFLHLLVLEHVIKTVRDSRTSPYRQHRQTMTTVWRLASTISEQQEWGKVRAHKFDDPNIFKQWRWTTRLRKYTTALYSATDRRERVNVNPKEGDETKLERDANSGDELNCEIRKRNGDR

Homology

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BLAST of Cp4.1LG01g12280 vs. NCBI nr
Match: KAG6601455.1 (hypothetical protein SDJN03_06688, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 557 bits (1436), Expect = 2.43e-196
Identity = 302/345 (87.54%), Postives = 308/345 (89.28%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEA+QFFAIVR IWNRLLLTYASACLAIVGC
Sbjct: 133 MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEASQFFAIVRNIWNRLLLTYASACLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LT+FLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA
Sbjct: 193 LTLFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCV+IRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVVIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFLHLLVLEHVIKT 240
           VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDS+LDMPVSDESTAFLHLLVLE V+KT
Sbjct: 313 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSSLDMPVSDESTAFLHLLVLEQVLKT 372

Query: 241 VRDSRTSPYRQHRQTMTTVWRLASTISEQQEWGKVRAHKFDDPNIFKQWRWTTRLRKYTT 300
           VRDSRTSPYRQHRQTMTTVWRLASTISEQQ+WGK R    D                   
Sbjct: 373 VRDSRTSPYRQHRQTMTTVWRLASTISEQQQWGKKRGENVD------------------- 432

Query: 301 ALYSATDRRERVNVNPKEGDETKLERDANSGDELNCEIRKRNGDR 345
                    E VNVNPKEGDETKLE DANSGDELNCEIRKRNGDR
Sbjct: 433 ---------EGVNVNPKEGDETKLEGDANSGDELNCEIRKRNGDR 449

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BLAST of Cp4.1LG01g12280 vs. NCBI nr
Match: KAG7032239.1 (hypothetical protein SDJN02_06282, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 473 bits (1218), Expect = 5.03e-164
Identity = 254/276 (92.03%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEA+QFFAIVR IWNRLLLTYASACLAIVGC
Sbjct: 133 MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEASQFFAIVRNIWNRLLLTYASACLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LT+FLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA
Sbjct: 193 LTLFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCV+IRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVVIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFLHLLVLEHVIKT 240
           VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDS+LDMPVSDEST              
Sbjct: 313 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSSLDMPVSDEST-------------- 372

Query: 241 VRDSRTSPYRQHRQTMTTVWRLASTISEQQEWGKVR 276
             DSRTSPYRQHRQTMTTVWRLASTISEQQ+WGKVR
Sbjct: 373 --DSRTSPYRQHRQTMTTVWRLASTISEQQQWGKVR 392

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BLAST of Cp4.1LG01g12280 vs. NCBI nr
Match: XP_023552200.1 (uncharacterized protein LOC111809945 [Cucurbita pepo subsp. pepo] >XP_023552208.1 uncharacterized protein LOC111809945 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425 bits (1093), Expect = 1.50e-145
Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC
Sbjct: 133 MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA
Sbjct: 193 LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDEST  L
Sbjct: 313 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTGIL 361

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BLAST of Cp4.1LG01g12280 vs. NCBI nr
Match: XP_022956505.1 (uncharacterized protein LOC111458224 [Cucurbita moschata])

HSP 1 Score: 416 bits (1070), Expect = 4.68e-142
Identity = 221/229 (96.51%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLFV+LSLVSKAAVVHTVDCTYAKKRFEA+QFFAIVR IWNRLLLTYASACLAIVGC
Sbjct: 133 MCFPLFVSLSLVSKAAVVHTVDCTYAKKRFEASQFFAIVRNIWNRLLLTYASACLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LT+FLVLLGAVCSTLYALAFSPDLI+FAAVIVGLIFSVIFANAVIICNISIVICVLEDIA
Sbjct: 193 LTLFLVLLGAVCSTLYALAFSPDLILFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCV+IRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVVIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDEST  L
Sbjct: 313 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTGIL 361

[Close]

BLAST of Cp4.1LG01g12280 vs. NCBI nr
Match: XP_022992238.1 (uncharacterized protein LOC111488617 [Cucurbita maxima] >XP_022992247.1 uncharacterized protein LOC111488617 [Cucurbita maxima])

HSP 1 Score: 403 bits (1035), Expect = 9.31e-137
Identity = 218/229 (95.20%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFP FVTLSLVSKAAVVHTVDCTYAKKR EA+QFFAIVR IWNRLLLTYASACLAIVGC
Sbjct: 133 MCFPFFVTLSLVSKAAVVHTVDCTYAKKRSEASQFFAIVRNIWNRLLLTYASACLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LTMFLVLLGAVC TLY LAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA
Sbjct: 193 LTMFLVLLGAVCCTLYTLAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMM+AVFYFSCRSSSMAISNGEQDSTLD PV DEST  L
Sbjct: 313 VMYSFVVLTDSMMSAVFYFSCRSSSMAISNGEQDSTLDTPV-DESTGIL 360

[Close]

BLAST of Cp4.1LG01g12280 vs. ExPASy TrEMBL
Match: A0A6J1GXY9 (uncharacterized protein LOC111458224 OS=Cucurbita moschata OX=3662 GN=LOC111458224 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 2.27e-142
Identity = 221/229 (96.51%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLFV+LSLVSKAAVVHTVDCTYAKKRFEA+QFFAIVR IWNRLLLTYASACLAIVGC
Sbjct: 133 MCFPLFVSLSLVSKAAVVHTVDCTYAKKRFEASQFFAIVRNIWNRLLLTYASACLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LT+FLVLLGAVCSTLYALAFSPDLI+FAAVIVGLIFSVIFANAVIICNISIVICVLEDIA
Sbjct: 193 LTLFLVLLGAVCSTLYALAFSPDLILFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCV+IRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVVIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDEST  L
Sbjct: 313 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTGIL 361

[Close]

BLAST of Cp4.1LG01g12280 vs. ExPASy TrEMBL
Match: A0A6J1JYM5 (uncharacterized protein LOC111488617 OS=Cucurbita maxima OX=3661 GN=LOC111488617 PE=4 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 4.51e-137
Identity = 218/229 (95.20%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFP FVTLSLVSKAAVVHTVDCTYAKKR EA+QFFAIVR IWNRLLLTYASACLAIVGC
Sbjct: 133 MCFPFFVTLSLVSKAAVVHTVDCTYAKKRSEASQFFAIVRNIWNRLLLTYASACLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LTMFLVLLGAVC TLY LAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA
Sbjct: 193 LTMFLVLLGAVCCTLYTLAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMM+AVFYFSCRSSSMAISNGEQDSTLD PV DEST  L
Sbjct: 313 VMYSFVVLTDSMMSAVFYFSCRSSSMAISNGEQDSTLDTPV-DESTGIL 360

[Close]

BLAST of Cp4.1LG01g12280 vs. ExPASy TrEMBL
Match: A0A1S3BEH4 (uncharacterized protein LOC103489158 OS=Cucumis melo OX=3656 GN=LOC103489158 PE=4 SV=1)

HSP 1 Score: 378 bits (971), Expect = 2.39e-127
Identity = 200/229 (87.34%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLF+TLSLVSKAAVVHTVDCTYAK+RFE   F AIVR IWNRLL TYAS CLAIVGC
Sbjct: 133 MCFPLFLTLSLVSKAAVVHTVDCTYAKRRFELGLFLAIVRNIWNRLLSTYASVCLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LTMFLVLLGAVC+TLY L FSPDLIV AAVIVGL+FS+IFANAVIICNI+IVICVLED+A
Sbjct: 193 LTMFLVLLGAVCTTLYVLGFSPDLIVSAAVIVGLVFSIIFANAVIICNIAIVICVLEDVA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCVLIRGQTQVGLLIFL STIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVLIRGQTQVGLLIFLGSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMM+AVFYFSCRSSSM ISNGE DS LD+ +SD S   L
Sbjct: 313 VMYSFVVLTDSMMSAVFYFSCRSSSMVISNGEHDSILDIAISDGSAGIL 361

[Close]

BLAST of Cp4.1LG01g12280 vs. ExPASy TrEMBL
Match: A0A6J1DCX0 (uncharacterized protein LOC111019201 OS=Momordica charantia OX=3673 GN=LOC111019201 PE=4 SV=1)

HSP 1 Score: 378 bits (970), Expect = 3.51e-127
Identity = 199/229 (86.90%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLF+TLSL+SKAAVVHTVDCTYAK+RFEA QFFA+VR IWNRLL TYAS CLAIVGC
Sbjct: 134 MCFPLFITLSLISKAAVVHTVDCTYAKRRFEAGQFFALVRNIWNRLLSTYASVCLAIVGC 193

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LT FLVLLGAVCST+Y L FSPDLIV AAVI+GLIFSVIFANAVIICNI+IVICVLE++A
Sbjct: 194 LTTFLVLLGAVCSTIYVLGFSPDLIVSAAVILGLIFSVIFANAVIICNIAIVICVLENVA 253

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCVL+RGQTQVGLLIFL STIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 254 GPGALLRSCVLVRGQTQVGLLIFLGSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 313

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMM+AVFYFSCRSSSM ISNGE DS LD+  SD S   L
Sbjct: 314 VMYSFVVLTDSMMSAVFYFSCRSSSMVISNGEHDSVLDIEDSDGSIGIL 362

[Close]

BLAST of Cp4.1LG01g12280 vs. ExPASy TrEMBL
Match: A0A0A0KST9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606450 PE=4 SV=1)

HSP 1 Score: 377 bits (967), Expect = 9.67e-127
Identity = 202/229 (88.21%), Postives = 208/229 (90.83%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLF+TLSLVSKAAVVHTVDCTYAK+RFE   F AIVR IWNRLL TYAS CLAIVGC
Sbjct: 133 MCFPLFLTLSLVSKAAVVHTVDCTYAKRRFELGLFLAIVRNIWNRLLSTYASVCLAIVGC 192

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LTMFLVLLGAVCSTLY L FSPDLIV AAVIVGL+FSVIFANAVIICNI IVICVLED+A
Sbjct: 193 LTMFLVLLGAVCSTLYVLGFSPDLIVSAAVIVGLVFSVIFANAVIICNIGIVICVLEDVA 252

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGALLRSCVLIRGQTQVGLLIFL STIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV
Sbjct: 253 GPGALLRSCVLIRGQTQVGLLIFLGSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 312

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDSTLDMPVSDESTAFL 229
           VMYSFVVLTDSMM+AVFY SCRSSSM ISNGE DS LD+ VS  ST  L
Sbjct: 313 VMYSFVVLTDSMMSAVFYLSCRSSSMVISNGEHDSILDIAVSGGSTGIL 361

[Close]

BLAST of Cp4.1LG01g12280 vs. TAIR 10
Match: AT1G69430.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits to 215 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-73
Identity = 140/206 (67.96%), Postives = 173/206 (83.98%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFPLF+TLSL+S+AAVV++VDCTY++K+    +F  I++++W RL++TY   C  IV C
Sbjct: 125 MCFPLFITLSLLSRAAVVYSVDCTYSRKKVVVTKFVVIMQRLWKRLVITYLWICTVIVVC 184

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
           LT F V L AVCS+ Y L FSPD   + A++VGL+FSV+FANA+IICN +IVI +LED++
Sbjct: 185 LTSFCVFLVAVCSSFYVLGFSPDFNAYGAILVGLVFSVVFANAIIICNTTIVISILEDVS 244

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           GPGAL+R+  LI+GQTQVGLLIFL STIG  FVEGLFEHRVK+LSYGDGSSR+WEGPLLV
Sbjct: 245 GPGALVRASDLIKGQTQVGLLIFLGSTIGLTFVEGLFEHRVKSLSYGDGSSRLWEGPLLV 304

Query: 181 VMYSFVVLTDSMMNAVFYFSCRSSSM 207
           VMYSFVVL D+MM+AVFYFSCRS SM
Sbjct: 305 VMYSFVVLIDTMMSAVFYFSCRSYSM 330

[Close]

BLAST of Cp4.1LG01g12280 vs. TAIR 10
Match: AT1G26650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 255.8 bits (652), Expect = 5.1e-68
Identity = 134/219 (61.19%), Postives = 174/219 (79.45%), Query Frame = 0


Query: 1   MCFPLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGC 60
           MCFP+F+T+SL+SKAAVV++VDC+Y+++  + ++F  I++KIW R++ TY   C+ IVGC
Sbjct: 109 MCFPVFITVSLLSKAAVVYSVDCSYSREVVDISKFLVILQKIWRRVVFTYVWICILIVGC 168

Query: 61  LTMFLVLLGAVCSTLYALAFSPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIA 120
            T F VLL A+CS+   L FSPD  V+ A++VGL FSV+FANA+IICN +IVI VLED++
Sbjct: 169 FTFFCVLLVAICSSFSVLGFSPDFNVYGAMLVGLAFSVVFANAIIICNTAIVISVLEDVS 228

Query: 121 GPGALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLV 180
           G GAL+R+  LI+GQ QVGLL+FL ST+G  FVEGLF+HRVK +SYGDGSSR+WEGPLLV
Sbjct: 229 GLGALMRASDLIKGQIQVGLLMFLGSTLGLAFVEGLFDHRVKKVSYGDGSSRLWEGPLLV 288

Query: 181 VMYSFVVLTDSMMNAVFYFSCR-SSSMAISNGEQDSTLD 219
           +MYSFV L DSMM+AVFYFSCR   SM  S GE    ++
Sbjct: 289 LMYSFVTLIDSMMSAVFYFSCRVYYSMEASRGETQPIME 327

[Close]

BLAST of Cp4.1LG01g12280 vs. TAIR 10
Match: AT5G61340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 3.7e-10
Identity = 60/233 (25.75%), Postives = 113/233 (48.50%), Query Frame = 0


Query: 4   PLFVTLSLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGCLTM 63
           P  +T  L+SKA V+  +   ++    +++  F +      RLL TY      ++     
Sbjct: 93  PFSLTFLLLSKAYVIKLLSNNHSA---DSSSVFYL------RLLKTYVCNFFFLLSANAS 152

Query: 64  FLVLLGAVCSTLYALAFSP-DLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIAGP 123
              L     +TL A  FS  +   F ++   +I+S+I ANA +I N+++V        G 
Sbjct: 153 AFALFFLAYNTLEAFGFSSRNFYTFLSLSSAIIYSIIIANAFVISNLALVSSPSSSSGGY 212

Query: 124 GALLRSCVLIRGQTQVGLLIFLVSTIGTVFVEGLFEHRVKTLSYG---DGSSRIWEGPLL 183
             +L++C+LIRG+    + + L + +G   VE LF++RV    Y    D  S   EG  +
Sbjct: 213 TNILKACLLIRGRNSTAMALALPTNLGLAGVEALFQYRVMRSYYNGDRDIISIALEGTFI 272

Query: 184 VVMYSFVVLTDSMMNAVFYFSCRSSSMAISNGEQDS-TLDMPVSDESTAFLHL 232
             +Y+  ++ D+++N +FY SC  +    + G +D  ++ + +S+     +H+
Sbjct: 273 AYLYALFLVLDTIVNFLFYQSCIKNEEDQNIGREDEYSIKIQISETENTKIHI 316

[Close]

BLAST of Cp4.1LG01g12280 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-05
Identity = 58/200 (29.00%), Postives = 96/200 (48.00%), Query Frame = 0


Query: 10  SLVSKAAVVHTVDCTYAKKRFEANQFFAIVRKIWNRLLLTYASACLAIVGCLTMFLVLLG 69
           SL+S AAVV TV   Y  K    +   + + K++ RL +T+    L +     +F V L 
Sbjct: 93  SLLSTAAVVFTVASLYTGKPVSFSSTLSAIPKVFKRLFITFLWVALLMFAYNAVFFVFL- 152

Query: 70  AVCSTLYALAF-SPDLIVFAAVIVGLIFSVIFANAVIICNISIVICVLEDIAGPGALLRS 129
                L AL   S  L + A VI+ +++  +      + ++  VI VLE + G  A+ ++
Sbjct: 153 --VMLLVALDLNSLGLAIVAGVIISVLYFGVHVYFTALWHLGSVISVLEPVYGIAAMRKA 212

Query: 130 CVLIRGQTQVGL-----LIFLVSTIGTVFVEGLFEHRVKTLSYGDGSSRIWEGPLLVVMY 189
             L++G+T++ +      +FL   IG VF   +     K   YG   +R   G LLV + 
Sbjct: 213 YELLKGKTKMAMGLIFVYLFLCGLIGVVFGAVVVHGGGK---YGT-FTRTLVGGLLVGVL 272

Query: 190 SFVVLTDSMMNAVFYFSCRS 204
             V L   ++ +VFY+ C+S
Sbjct: 273 VMVNLVGLLVQSVFYYVCKS 285

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12280 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g12280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601455.1	2.43e-196	87.54	hypothetical protein SDJN03_06688, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7032239.1	5.03e-164	92.03	hypothetical protein SDJN02_06282, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023552200.1	1.50e-145	99.13	uncharacterized protein LOC111809945 [Cucurbita pepo subsp. pepo] >XP_023552208....	[more]
XP_022956505.1	4.68e-142	96.51	uncharacterized protein LOC111458224 [Cucurbita moschata]	[more]
XP_022992238.1	9.31e-137	95.20	uncharacterized protein LOC111488617 [Cucurbita maxima] >XP_022992247.1 uncharac...	[more]

BLAST of Cp4.1LG01g12280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXY9	2.27e-142	96.51	uncharacterized protein LOC111458224 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A6J1JYM5	4.51e-137	95.20	uncharacterized protein LOC111488617 OS=Cucurbita maxima OX=3661 GN=LOC111488617...	[more]
A0A1S3BEH4	2.39e-127	87.34	uncharacterized protein LOC103489158 OS=Cucumis melo OX=3656 GN=LOC103489158 PE=...	[more]
A0A6J1DCX0	3.51e-127	86.90	uncharacterized protein LOC111019201 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A0A0KST9	9.67e-127	88.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606450 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g12280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69430.1	2.4e-73	67.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G26650.1	5.1e-68	61.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G61340.1	3.7e-10	25.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G31130.1	1.6e-05	29.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..345
None	No IPR available	PANTHER	PTHR33133:SF1	SON OF SEVENLESS PROTEIN	coord: 1..221
None	No IPR available	PANTHER	PTHR33133	OS08G0107100 PROTEIN-RELATED	coord: 1..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12280.1	Cp4.1LG01g12280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane