Cp4.1LG01g12140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	lisH domain-containing protein C1711.05 isoform X4
Location	Cp4.1LG01: 8991372 .. 8992310 (+)
RNA-Seq Expression	Cp4.1LG01g12140
Synteny	Cp4.1LG01g12140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGACGGGTAGATGTGAAACAAGCTCACATTCAACAAAACAGCCAGATATTATAGGTTTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGAGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGTTGGAATTATCAGATCTTGTTCAAGTTGACGAAAATGTTAACCGACCCGAAGCAGGCACAATTTTCTTGGGAAATCCCGATCATGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCATTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGGAAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCATCTGCAGTTTTCCAAAGAAGTAGATCATCCACTCCATTGGAATGGAGTATTGCTTCAAATGAATCCTTGTTTAGCATTCATGGTGGAGATGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGACGAAGTCAGACGAGTTGACGAAATCAGACGAGTTGACGAAATCAGACGAGTTGACGAAATCAGACGAGTTGCTTGTGTTTAACTCACCACCTGCAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATATGAAGAGGAGCCTAAAGTGGCAGATACCACAGAATATAACATTGAAGATAAAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAATTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATGTAA

mRNA sequence

ATGGCAGCGACGGGTAGATGTGAAACAAGCTCACATTCAACAAAACAGCCAGATATTATAGGTTTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGAGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGTTGGAATTATCAGATCTTGTTCAAGTTGACGAAAATGTTAACCGACCCGAAGCAGGCACAATTTTCTTGGGAAATCCCGATCATGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCATTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGGAAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCATCTGCAGTTTTCCAAAGAAGTAGATCATCCACTCCATTGGAATGGAGTATTGCTTCAAATGAATCCTTGTTTAGCATTCATGGTGGAGATGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGACGAAGTCAGACGAGTTGACGAAATCAGACGAGTTGACGAAATCAGACGAGTTGACGAAATCAGACGAGTTGCTTGTGTTTAACTCACCACCTGCAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATATGAAGAGGAGCCTAAAGTGGCAGATACCACAGAATATAACATTGAAGATAAAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAATTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATGTAA

Coding sequence (CDS)

ATGGCAGCGACGGGTAGATGTGAAACAAGCTCACATTCAACAAAACAGCCAGATATTATAGGTTTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGAGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGTTGGAATTATCAGATCTTGTTCAAGTTGACGAAAATGTTAACCGACCCGAAGCAGGCACAATTTTCTTGGGAAATCCCGATCATGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCATTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGGAAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCATCTGCAGTTTTCCAAAGAAGTAGATCATCCACTCCATTGGAATGGAGTATTGCTTCAAATGAATCCTTGTTTAGCATTCATGGTGGAGATGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGACGAAGTCAGACGAGTTGACGAAATCAGACGAGTTGACGAAATCAGACGAGTTGACGAAATCAGACGAGTTGCTTGTGTTTAACTCACCACCTGCAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATATGAAGAGGAGCCTAAAGTGGCAGATACCACAGAATATAACATTGAAGATAAAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAATTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATGTAA

Protein sequence

MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVITSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPM

Homology

[Close]

BLAST of Cp4.1LG01g12140 vs. NCBI nr
Match: XP_023530940.1 (uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo] >XP_023530948.1 uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo] >XP_023530956.1 uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590 bits (1520), Expect = 2.12e-210
Identity = 311/312 (99.68%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD
Sbjct: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180
           ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF
Sbjct: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180

Query: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240
           SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240

Query: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300
           TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER
Sbjct: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300

Query: 301 SQCSSNSFAFPM 312
           SQCSSNSFAFP+
Sbjct: 301 SQCSSNSFAFPI 312

[Close]

BLAST of Cp4.1LG01g12140 vs. NCBI nr
Match: KAG6601476.1 (hypothetical protein SDJN03_06709, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518 bits (1333), Expect = 1.28e-182
Identity = 279/312 (89.42%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QV ENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSS  SAKSEKSSGSQGPTSASQVYD
Sbjct: 61  QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSNGSAKSEKSSGSQGPTSASQVYD 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180
           ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRS+TPLEWSIASNESLF
Sbjct: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240
           SIHGGDDSFSGDNLSMLSDLGK                        SDELLVFNSPP VI
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGK------------------------SDELLVFNSPPEVI 240

Query: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300
           TSRETEMKSVEYEEEPKVAD+TEYNIEDKEGLVAED SGRNVLPPALSSNSSSRSRHSER
Sbjct: 241 TSRETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDPSGRNVLPPALSSNSSSRSRHSER 288

Query: 301 SQCSSNSFAFPM 312
           SQCSSNSF+FP+
Sbjct: 301 SQCSSNSFSFPI 288

[Close]

BLAST of Cp4.1LG01g12140 vs. NCBI nr
Match: XP_022978412.1 (uncharacterized protein LOC111478406 [Cucurbita maxima] >XP_022978421.1 uncharacterized protein LOC111478406 [Cucurbita maxima] >XP_022978430.1 uncharacterized protein LOC111478406 [Cucurbita maxima])

HSP 1 Score: 511 bits (1315), Expect = 1.39e-179
Identity = 274/312 (87.82%), Postives = 280/312 (89.74%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPT QLAYGSSSCINL+ELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTGQLAYGSSSCINLMELSDLV 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QVDENVNRPE GTI LGNPDHDVYQLQFKDDESDVSS+CSAKSEKSSGSQGPTSASQV D
Sbjct: 61  QVDENVNRPEGGTICLGNPDHDVYQLQFKDDESDVSSLCSAKSEKSSGSQGPTSASQVSD 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180
           ITHESGGN MSPTQSPPLQTMDRVGGYE YDP RIPSAVFQRSRS+TPLEWSIASNESLF
Sbjct: 121 ITHESGGNVMSPTQSPPLQTMDRVGGYEPYDPLRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240
           SIHGGDDSFSGDNLSMLSDLGK                        SDELLVFNS PAVI
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGK------------------------SDELLVFNSAPAVI 240

Query: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300
           TSRETEMKSVEYEEEPKVADTTEYNIED+EGLVAEDLSGRNVLPPALSS+SSSRSRHSER
Sbjct: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDREGLVAEDLSGRNVLPPALSSSSSSRSRHSER 288

Query: 301 SQCSSNSFAFPM 312
           SQCSSNSFAFP+
Sbjct: 301 SQCSSNSFAFPI 288

[Close]

BLAST of Cp4.1LG01g12140 vs. NCBI nr
Match: XP_022956763.1 (uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956764.1 uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956765.1 uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956767.1 uncharacterized protein LOC111458373 [Cucurbita moschata])

HSP 1 Score: 497 bits (1280), Expect = 2.29e-174
Identity = 271/312 (86.86%), Postives = 276/312 (88.46%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAATGRCE ++         GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV
Sbjct: 1   MAATGRCEDTAGE-------GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QV ENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD
Sbjct: 61  QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180
           ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRS+TPLEWSIASNESLF
Sbjct: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240
           SIHGGDDSFSGDNLSMLSDLGK                        SDELLVFNSPP VI
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGK------------------------SDELLVFNSPPEVI 240

Query: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300
           TSRETEMKSVEYEEEPKVAD+TEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER
Sbjct: 241 TSRETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 281

Query: 301 SQCSSNSFAFPM 312
           SQCSSNSFAFP+
Sbjct: 301 SQCSSNSFAFPI 281

[Close]

BLAST of Cp4.1LG01g12140 vs. NCBI nr
Match: KAG7032255.1 (hypothetical protein SDJN02_06299, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497 bits (1280), Expect = 1.05e-173
Identity = 271/312 (86.86%), Postives = 276/312 (88.46%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAATGRCE ++         GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV
Sbjct: 44  MAATGRCEDTAGE-------GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 103

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QV ENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD
Sbjct: 104 QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 163

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180
           ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRS+TPLEWSIASNESLF
Sbjct: 164 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 223

Query: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240
           SIHGGDDSFSGDNLSMLSDLGK                        SDELLVFNSPP VI
Sbjct: 224 SIHGGDDSFSGDNLSMLSDLGK------------------------SDELLVFNSPPEVI 283

Query: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300
           TSRETEMKSVEYEEEPKVAD+TEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER
Sbjct: 284 TSRETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 324

Query: 301 SQCSSNSFAFPM 312
           SQCSSNSFAFP+
Sbjct: 344 SQCSSNSFAFPI 324

[Close]

BLAST of Cp4.1LG01g12140 vs. ExPASy TrEMBL
Match: A0A6J1IL15 (uncharacterized protein LOC111478406 OS=Cucurbita maxima OX=3661 GN=LOC111478406 PE=4 SV=1)

HSP 1 Score: 511 bits (1315), Expect = 6.71e-180
Identity = 274/312 (87.82%), Postives = 280/312 (89.74%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPT QLAYGSSSCINL+ELSDLV
Sbjct: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTGQLAYGSSSCINLMELSDLV 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QVDENVNRPE GTI LGNPDHDVYQLQFKDDESDVSS+CSAKSEKSSGSQGPTSASQV D
Sbjct: 61  QVDENVNRPEGGTICLGNPDHDVYQLQFKDDESDVSSLCSAKSEKSSGSQGPTSASQVSD 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180
           ITHESGGN MSPTQSPPLQTMDRVGGYE YDP RIPSAVFQRSRS+TPLEWSIASNESLF
Sbjct: 121 ITHESGGNVMSPTQSPPLQTMDRVGGYEPYDPLRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240
           SIHGGDDSFSGDNLSMLSDLGK                        SDELLVFNS PAVI
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGK------------------------SDELLVFNSAPAVI 240

Query: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300
           TSRETEMKSVEYEEEPKVADTTEYNIED+EGLVAEDLSGRNVLPPALSS+SSSRSRHSER
Sbjct: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDREGLVAEDLSGRNVLPPALSSSSSSRSRHSER 288

Query: 301 SQCSSNSFAFPM 312
           SQCSSNSFAFP+
Sbjct: 301 SQCSSNSFAFPI 288

[Close]

BLAST of Cp4.1LG01g12140 vs. ExPASy TrEMBL
Match: A0A6J1GYP0 (uncharacterized protein LOC111458373 OS=Cucurbita moschata OX=3662 GN=LOC111458373 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 1.11e-174
Identity = 271/312 (86.86%), Postives = 276/312 (88.46%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAATGRCE ++         GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV
Sbjct: 1   MAATGRCEDTAGE-------GLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QV ENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD
Sbjct: 61  QVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIASNESLF 180
           ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRS+TPLEWSIASNESLF
Sbjct: 121 ITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLF 180

Query: 181 SIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAVI 240
           SIHGGDDSFSGDNLSMLSDLGK                        SDELLVFNSPP VI
Sbjct: 181 SIHGGDDSFSGDNLSMLSDLGK------------------------SDELLVFNSPPEVI 240

Query: 241 TSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 300
           TSRETEMKSVEYEEEPKVAD+TEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER
Sbjct: 241 TSRETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSER 281

Query: 301 SQCSSNSFAFPM 312
           SQCSSNSFAFP+
Sbjct: 301 SQCSSNSFAFPI 281

[Close]

BLAST of Cp4.1LG01g12140 vs. ExPASy TrEMBL
Match: A0A1S4DW31 (uncharacterized protein LOC103489558 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103489558 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 1.70e-124
Identity = 209/314 (66.56%), Postives = 245/314 (78.03%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAA G  E SSH+T QPDIIGLGS +S  T G+G SL PT+QL +GS+S I+LLE+SDL 
Sbjct: 1   MAARGSRERSSHTTGQPDIIGLGSINSGGTGGKGVSLPPTKQLGFGSASSIDLLEISDLA 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QV  NVNRPEA TI L NP   +YQLQFKDD+S+VSS CS+KSEKSSGS  PTS SQV  
Sbjct: 61  QVGANVNRPEADTICLANPGRGIYQLQFKDDDSNVSSNCSSKSEKSSGSPCPTSVSQVSG 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQRSRSSTPLEWSIASNESL 180
           +THESGGN +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQRS S TP+EWSIASNESL
Sbjct: 121 LTHESGGNVLSPTQSPSLQTMDRMGGYDESYDPFRIPSAVFQRSSSVTPMEWSIASNESL 180

Query: 181 FSIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAV 240
           FSI  G++SFS D++SMLS+ GKS ELTKS +  K            +DE  VF+ PPAV
Sbjct: 181 FSIQVGNNSFSRDHVSMLSEFGKSGELTKSGKFKK------------ADESFVFSQPPAV 240

Query: 241 ITSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAED-LSGRNVLPPALSSNSSSRSRHS 300
           ITSRE EMKS EYEE PK+ADT EYNI+DK G + +D LS RN+ PPA+S NSS++SRHS
Sbjct: 241 ITSREAEMKSAEYEEGPKMADTIEYNIKDKGGSITDDDLSDRNLPPPAVSWNSSTKSRHS 300

Query: 301 ERSQCSSNSFAFPM 312
           ++SQ SS+SFAFP+
Sbjct: 301 DKSQSSSDSFAFPI 302

[Close]

BLAST of Cp4.1LG01g12140 vs. ExPASy TrEMBL
Match: A0A1S4DW48 (uncharacterized protein LOC103489558 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489558 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 2.33e-123
Identity = 209/314 (66.56%), Postives = 245/314 (78.03%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAA G  E SSH+T QPDIIGLGS +S  T G+G SL PT+QL +GS+S I+LLE+SDL 
Sbjct: 1   MAARGSRERSSHTTGQPDIIGLGSINSGGTGGKGVSLPPTKQLGFGSASSIDLLEISDLA 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QV  NVNRPEA TI L NP   +YQLQFKDD+S+VSS CS+KSEKSSGS  PTS SQV  
Sbjct: 61  QVGANVNRPEADTICLANPGRGIYQLQFKDDDSNVSSNCSSKSEKSSGSPCPTSVSQVSG 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQRSRSSTPLEWSIASNESL 180
           +THESGGN +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQRS S TP+EWSIASNESL
Sbjct: 121 LTHESGGNVLSPTQSPSLQTMDRMGGYDESYDPFRIPSAVFQRSSSVTPMEWSIASNESL 180

Query: 181 FSIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAV 240
           FSI  G++SFS D++SMLS+ GKS ELTKS +  K            +DE  VF+ PPAV
Sbjct: 181 FSIQVGNNSFSRDHVSMLSEFGKSGELTKSGKFKK------------ADESFVFSQPPAV 240

Query: 241 ITSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAED-LSGRNVLPPALSSNSSSRSRHS 300
           ITSRE EMKS EYEE PK+ADT EYNI+DK G + +D LS RN+ PPA+S NSS++SRHS
Sbjct: 241 ITSREAEMKSAEYEEGPKMADTIEYNIKDKGGSITDDDLSDRNLPPPAVSWNSSTKSRHS 300

Query: 301 ERSQCSSNSFAFPM 312
           ++SQ SS+SFAFP+
Sbjct: 301 DKSQSSSDSFAFPI 302

[Close]

BLAST of Cp4.1LG01g12140 vs. ExPASy TrEMBL
Match: A0A1S4DW29 (uncharacterized protein LOC103489558 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489558 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 3.47e-123
Identity = 209/314 (66.56%), Postives = 245/314 (78.03%), Query Frame = 0


Query: 1   MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLV 60
           MAA G  E SSH+T QPDIIGLGS +S  T G+G SL PT+QL +GS+S I+LLE+SDL 
Sbjct: 1   MAARGSRERSSHTTGQPDIIGLGSINSGGTGGKGVSLPPTKQLGFGSASSIDLLEISDLA 60

Query: 61  QVDENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYD 120
           QV  NVNRPEA TI L NP   +YQLQFKDD+S+VSS CS+KSEKSSGS  PTS SQV  
Sbjct: 61  QVGANVNRPEADTICLANPGRGIYQLQFKDDDSNVSSNCSSKSEKSSGSPCPTSVSQVSG 120

Query: 121 ITHESGGNAMSPTQSPPLQTMDRVGGY-ESYDPSRIPSAVFQRSRSSTPLEWSIASNESL 180
           +THESGGN +SPTQSP LQTMDR+GGY ESYDP RIPSAVFQRS S TP+EWSIASNESL
Sbjct: 121 LTHESGGNVLSPTQSPSLQTMDRMGGYDESYDPFRIPSAVFQRSSSVTPMEWSIASNESL 180

Query: 181 FSIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNSPPAV 240
           FSI  G++SFS D++SMLS+ GKS ELTKS +  K            +DE  VF+ PPAV
Sbjct: 181 FSIQVGNNSFSRDHVSMLSEFGKSGELTKSGKFKK------------ADESFVFSQPPAV 240

Query: 241 ITSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAED-LSGRNVLPPALSSNSSSRSRHS 300
           ITSRE EMKS EYEE PK+ADT EYNI+DK G + +D LS RN+ PPA+S NSS++SRHS
Sbjct: 241 ITSREAEMKSAEYEEGPKMADTIEYNIKDKGGSITDDDLSDRNLPPPAVSWNSSTKSRHS 300

Query: 301 ERSQCSSNSFAFPM 312
           ++SQ SS+SFAFP+
Sbjct: 301 DKSQSSSDSFAFPI 302

[Close]

BLAST of Cp4.1LG01g12140 vs. TAIR 10
Match: AT2G03630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 3.7e-17
Identity = 87/257 (33.85%), Postives = 130/257 (50.58%), Query Frame = 0


Query: 63  DENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVY--- 122
           D++VN+  +     G+ +H    LQ    E++   I S    + S S   +S+S  Y   
Sbjct: 16  DQDVNKKGSLDDENGDVEHKTIPLQ----ETETVIINSESHSRLSSSSSSSSSSSSYLSP 75

Query: 123 --DITHESGGNAMSPTQ--SPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIAS 182
             D+  E    +++  +  SPP+Q MDR      YDP+RIPS+VF+RS+S+ P EWS  S
Sbjct: 76  PKDLPEEVLKESLNDPEISSPPVQVMDR-DNNGKYDPNRIPSSVFERSKSNVPAEWSCTS 135

Query: 183 NESLFSIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNS 242
           NESLFSIH G++SF+G       DL KS EL KS EL           +  S+   V   
Sbjct: 136 NESLFSIHLGNNSFTGYG----GDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPVVEE 195

Query: 243 PPAVITSRETEMKSVEYEEEPKVADTTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRS 302
           P  V + +E ++  VE        +T   + +++EG   +  S      PA+S  + + S
Sbjct: 196 PKVVESDKEEKVVLVE--------ETHTSSSDEEEG---KRESHEKEQHPAVSWKTPTTS 252

Query: 303 RHSERSQCSSNSFAFPM 313
             S RS  S++SF+FPM
Sbjct: 256 YRSNRSSNSAHSFSFPM 252

[Close]

BLAST of Cp4.1LG01g12140 vs. TAIR 10
Match: AT2G03630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-14
Identity = 68/189 (35.98%), Postives = 97/189 (51.32%), Query Frame = 0


Query: 63  DENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVY--- 122
           D++VN+  +     G+ +H    LQ    E++   I S    + S S   +S+S  Y   
Sbjct: 16  DQDVNKKGSLDDENGDVEHKTIPLQ----ETETVIINSESHSRLSSSSSSSSSSSSYLSP 75

Query: 123 --DITHESGGNAMSPTQ--SPPLQTMDRVGGYESYDPSRIPSAVFQRSRSSTPLEWSIAS 182
             D+  E    +++  +  SPP+Q MDR      YDP+RIPS+VF+RS+S+ P EWS  S
Sbjct: 76  PKDLPEEVLKESLNDPEISSPPVQVMDR-DNNGKYDPNRIPSSVFERSKSNVPAEWSCTS 135

Query: 183 NESLFSIHGGDDSFSGDNLSMLSDLGKSDELTKSDELTKSDELTKSDELTKSDELLVFNS 242
           NESLFSIH G++SF+G       DL KS EL KS EL           +  S+   V   
Sbjct: 136 NESLFSIHLGNNSFTGYG----GDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPVVEE 195

Query: 243 PPAVITSRE 245
           P  V + +E
Sbjct: 196 PKVVESDKE 195

[Close]

BLAST of Cp4.1LG01g12140 vs. TAIR 10
Match: AT3G02125.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 3.5e-07
Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 150 YDPSRIPSAVFQRSRSSTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDE---- 209
           YDP+RIPS+VF  S+     EWS+ASNESLFSIH  D +FS      L+++ + +E    
Sbjct: 89  YDPTRIPSSVFS-SKPGNSTEWSLASNESLFSIH--DGNFSISTALRLAEIPRFEETVHV 148

Query: 210 LTKSDELTKSDELTKSDELTKSDELLVFNSPPAVITSRETEMKSVEYEEEPKVADTTEYN 269
           +T+ + +     + K +E  K  E +    P  V  S      + E E+  +V    E+ 
Sbjct: 149 ITEINSVPLPPPVKKPNEYEK--ETIAEKEPYQVENSNSDIEDNEEEEKMSEVESDDEHE 208

Query: 270 IEDKEGLVAEDLSGRNVLPP----------ALSSNSSSRSRHSERSQCSSNSFAFPM 313
            E  + + AE L  + V+            ++ S+S S S  S+ S  S  SFAFP+
Sbjct: 209 EEQTDMIEAEALVEKEVIETVKENKPEDSNSIVSHSPSISCRSDTSNNSIGSFAFPL 260

[Close]

BLAST of Cp4.1LG01g12140 vs. TAIR 10
Match: AT5G39200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39140.1); Has 65 Blast hits to 65 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 3.3e-05
Identity = 61/168 (36.31%), Postives = 78/168 (46.43%), Query Frame = 0


Query: 150 YDPSRIPSAVFQRSRSSTP-LEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELTK 209
           Y+P RIP +VF  + S TP  EWSI SNESLFSIH GD SFS                  
Sbjct: 9   YEPDRIPHSVF--ATSVTPKQEWSIQSNESLFSIHMGDHSFS------------------ 68

Query: 210 SDELTKSDELTKSDELTKSDELLVFNSPPAVITSRETEMKSVEYEEEPKVADTTEYNIED 269
             ++ KS ELT + E T S  +  +N+             +++ +  P  A T E NI  
Sbjct: 69  --KMYKSGELT-NFEYTASPYISYYNN-------------NIDNKIAPTDAGTKEVNITM 128

Query: 270 KE-GLVAEDLSG-RNVLPPALSSN---SSSRSRHSERSQCSSNSFAFP 312
            E G    +  G  NV  P        S ++S HSE S  S+ SFAFP
Sbjct: 129 VETGPKTGNRDGLTNVPKPDPRQQIPISPTKSCHSETSNNSTTSFAFP 140

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12140 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g12140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530940.1	2.12e-210	99.68	uncharacterized protein LOC111793332 [Cucurbita pepo subsp. pepo] >XP_023530948....	[more]
KAG6601476.1	1.28e-182	89.42	hypothetical protein SDJN03_06709, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022978412.1	1.39e-179	87.82	uncharacterized protein LOC111478406 [Cucurbita maxima] >XP_022978421.1 uncharac...	[more]
XP_022956763.1	2.29e-174	86.86	uncharacterized protein LOC111458373 [Cucurbita moschata] >XP_022956764.1 unchar...	[more]
KAG7032255.1	1.05e-173	86.86	hypothetical protein SDJN02_06299, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG01g12140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IL15	6.71e-180	87.82	uncharacterized protein LOC111478406 OS=Cucurbita maxima OX=3661 GN=LOC111478406...	[more]
A0A6J1GYP0	1.11e-174	86.86	uncharacterized protein LOC111458373 OS=Cucurbita moschata OX=3662 GN=LOC1114583...	[more]
A0A1S4DW31	1.70e-124	66.56	uncharacterized protein LOC103489558 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DW48	2.33e-123	66.56	uncharacterized protein LOC103489558 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DW29	3.47e-123	66.56	uncharacterized protein LOC103489558 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG01g12140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03630.1	3.7e-17	33.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G03630.2	2.2e-14	35.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02125.1	3.5e-07	32.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G39200.1	3.3e-05	36.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..140
None	No IPR available	PANTHER	PTHR33673	SUPPRESSOR SRP40-LIKE PROTEIN	coord: 219..312
None	No IPR available	PANTHER	PTHR33673	SUPPRESSOR SRP40-LIKE PROTEIN	coord: 16..213
None	No IPR available	PANTHER	PTHR33673:SF27	SUBFAMILY NOT NAMED	coord: 219..312
None	No IPR available	PANTHER	PTHR33673:SF27	SUBFAMILY NOT NAMED	coord: 16..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12140.1	Cp4.1LG01g12140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane