CmoCh18G004470 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh18G004470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr18: 2954523 .. 2959586 (+)
RNA-Seq Expression	CmoCh18G004470
Synteny	CmoCh18G004470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAATCCAACCAACCACCACCACCCACCGTCATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACCGCCACTCCCGTTGTCGTTCCGACGCAACGTGTCTTCTTCCGTTCACCTCGTCCCTAACGAGGCCGTTAACAAGCACGACGCTCGGAGGTGTACTAATAATGGCATCAAAATAGTGTGTCACGTATTTAACCCAAAGGAGCCGTCCAGTTCTCATAACGATGGCTTTCCTTTATTAAACACCAAAGAGGCTATGCAGTCACTGCTGTGCCTCCCTTTGGATGCGGCGGCGGAGGGTGAAACCAAAGACATAAGTGCAAACAAGGTGAGTTTTAGTTTATACTTTGGATGGTGAAAGGCCCACATCGGCTAATTTACCGAATGATCAAGGGTTTATAAACAAAGAATACACTCTTTGTTAGTATGAGTCCTTTTGGAGAAGTCCAAAGCAAAGCCATGAGAGCTTATGTTCAAAGTGGACAATATCATACCATTATAGAGAGTCGTGTTCGTCTAATATGGTATCAGAGTCATGCTCTATATTTAGTCGTGCATATTGGTAAATCTTCGAATGTTGAACAATCCAAAATAAAAAGGAGTCAAGCCTCCTCGGAGGCAGTAAAAAATGACTAAGACTCCAAAGAAGTCGAGTCTCGATTAAGGGGAGTCGTACTTTGTTCGAGGAGAGGTGTTGGATGATGAAAGTCCCACATCAGCTAATTTAAGGAATGATTATGAGTTTATAAACAAAGAATACACTCTTCATTGGTACGAGGCCTTTTGGGGAAATCCAAAGGAAAGCCATGAGAGCTTATGTTTAAAGTGGACAATATCATACTATTGTGGAGAGTCGCGTTCGTCTAACACTTTCAACTATGTTTAGGTTTGATTATAAGTTTGAGGGTTTATTGTTTGTGGCAGAGAAAAGCTTTACAGGCATTGTTGGCTAATAATCCTTCAGGGGCTGAGAAGATAATGAAGAATGTGCTTCAAACATACGAAAAGGACAATATGCAGACTAAATATGAAGCTATCTTGGCAACAGTCGTAATTCTCATCCACACGGTATTTTCTCTGGAGTATACACGAGTTGGATTGGATTGGGTCGAGTTGAAATTGTTTTAAAATTTCACTTATCGATACATATTAGGTTGATAATTAGTTCAATTATTAAAGTCAGAATTGAGTTCCTTTGAGTTTTGTTGTTATTCTGTTTTTGGATTGATAGAAGATTTGAATTTTTTGTTTTTCAAAAATTTAATTGTGAGAGTGGAGGTCGATTGGAGAGGGGAATAAATACATTCTTTGTAAGGGTGTGGAAACTTGTATCTAGGAGATGGTTTTAAAAAACTTGAGGGGAAACCCAAAAGAAAAAATCCAAAGAGGACAAATATTTGTTGGCGGGAGGTTGGACTGTTACAAATGGTATTAGAGCTAGACATTTAGCGGTGTGCCAGTGAGGATGTTGAGCCCTAAAGGGGGGTGGACCCCGCCATAGTGTGCCAGCGAGGACGTTGAGCCCCTTAGGAGGGTGGACACTAGGTAGTGTGCCAGCGAGGACGCTAAGCCCCTTAGGAAGGTGGACACTGGGCAGTGTGCCAGCAAGGATGCTGAGCTTCGTTGGGGGTAGACATTAGGCGGTTTGCCAGCAAGGACACTAAGCCTCGAAGGGGGGTGGACACCAAGCGGTGTGCCATCGAGGATGCTAAGGCTCGTTGGGGGTGGACATCAGACGGTGTGCCAATGAGGATTCTAAGGCTCATAGGGGGTGAACAACGGGCGATATACCAACGATGATGTTGAGTCTCGAAAGGGGTGAACACCGAGCGGTATACCAACGAAGACGCTGAGCTCCGTAGGGGGGTGAACACGGGGTAGTGTGCCAGTGTGGATGTTGAGCCTCGTAAGGTGGACACCAAGCAGTGTGCCAACGAGGATTCTAAGGCTCATAGGGGGTGGACAACGGGCAGTATACCAGCAATGACATTGAGCCTCGGAAGGGGTGGACACCGCTGTTGAGCCCCAAAGGGAGTGGACACCAAGCGGTGTACCAGCGAAGACGCTGAGCTCCGTAGGGGGGTGAACACCAGGTAGTGTGCCAACGTGGATGTTGAACCACGTAAATGGTGGACATCAGATGGTGTACCAACAAGGACATTGAGCCACATAAAAGATGGACACTAAACAGTGTACCAGCGAAGGCGTTGAGCCACAGAAGAGAGTGGACAATGCTTTATTTTTCAAAATTGATCATGTATAAACACTTTTTGAAAAAAAAAATCAATAATTTAATGTTAGTTAATAATAGTTTATATTTGTTAATTTAGATCATAAAAGTGGGTTTTTGAGAAAATATTGATAAAAAGTAAAAAATAATATATATATATATATATATATAAAATTAAAAAAATTATTATTTTAATATAGGGAGGAAGAGAAAGCTTGGGTGATGCTATTCACCATCTGAACAAAATAGAAGAGTGGGACAATAAGCCAAGTGATGTAAAGCGTATCCTTTATCGGGTAAGCTATTTGATCTTAATACTTTTTATTTTTATTTAAATAATACTTTCATTTTAAAATATCTTTTATTTTTTATTTTGACTTTTGATTATTTAATCTTTATTTATAATAAAAATGGGTTAAAATAAACTATTGCCAAGAAATTTATTTAATCTCATGTTTTTAAATTCAAATTGTAAAAAATAATAATAATATTATTATTAAATAAAATTGAAAAAAAGCATCAACTAATATTGATATATATAAATCATTTCAATGTTGTTTTTTTTTTCTCTTTAAATTGATGAAATTAACTATATTACAACTTTTAAATTTTTTATATTTTAATAAATATTTAATATTTTTAGTAAGAATAAAATTAAAAAATTTTAAATGACGATTATAGTCCTATCTTTTTTTTTTCTTCTATAATAAATTTATATAAAAAAAAACTTTAAATTACAAGTTCAAACATTAAATTTTTAAAATTATATGTCCAAATGAGTTTGAATTTTTCTAATAAATGTCTAATGGATTGAGTACAAATAATATAAAAAAAAAAGAAAGTATATTTCAATTTTAACCTTTTATTTGTAAATTAAAGTTTAATCTTTTGAATTTTTTAATAAATATCAAATATTTTCCATTAAGAATAAAATTTAAAATTTTAAAAGTATATTTCAGAAGTGAAATGACAATCATAGCCTTCCCGTTTCCTTCCTTAGTTGTGTGTTAATTTTTTTTTAATATATGTCTAATAGATTTTGGTATGAATAATACCAAGAGTTTAAAAAGTGTATTTCATAAGTAAAATGACAATTTTAACTTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTATAAGTTTAAACTTTAAATTTTTTAATAAATGTCTAATAAATTTAAAAAGTATATTTTATAAGTAAAATTATAATTTTAGCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATAGAGTAAATTACTAAGTTTAACCTTTAATTTTTTAATAAATATCTAATAAATTAAAAAAAAAAAGTATATTTCATGAGTAAAATTACAATTTTAGCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACCATTAATTTTTTAATAAATATCTAATAAATTAAAAAAAATATATATTTCATAAGTAAAATTACAATTTTAGCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACCATTAATTTTTTAATAAATATCTAATAAATTAAAAAAATATATATTTCATAAGTAAAATTACAATTTTATCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACCATTAATTTTTTAATAAATATCTAATAAATTAAAAAAATTAAAATATAGTAAATTACTAAGTTTAACCATTAATTTTTTAATAAATATCTAATAAATTAAAAAAATATATATTTCATAAGTAAAATTACAATTTTATCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACAATTTTATCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACCATTTTATCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACCTTTAATTTTTTAATAAATATCTAATAAATTAAAAAAATAAAAATATAGTAAATTACTAAGTTTAACCTTTAATTTTTTAATAAATATCTAATAAATTAAAAAAATATATATTTCATAAGTAAAATTACAATTTTATCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACCTTTAATTTTTTAATAAATATCTAATAAATTAAAAAAATAAAAAGTATATTTCATAATAAAATTACAATTTTAGCCTTTTATTTTTCGTTATTATAGCAACTAATTAAAATATAGTAAATTACTAAGTTTAACCTTTAATTTTTTAATAAATATCTAATAAATTAAAAAAAAAAAGTATATTTCATAATAAAATTACAATTTTAGCCTTATATTTTTTATTATTATAACAACTAATTAAAATATAGTAAATTACTAAGTTTAACCTTTAAATTTTTAATAAATATCTAATAAATGAAAAAAAAAAAGTATATTTCATAAGTAAAATAAAAAGTATATTTTATAAGTAAAATGACAATTTTAACCTTTTATTTTTCATTATTATAACAACTAATTAAAATATTAAATTTAAAAAAAAATAGTATATTTGATAAGTGAAATGACAATTTTAGCCTTATTTTTCTTCTTTCTATAATAATTTTATAATTAAGTAATAATTTGATGCAGGCTGTTATATATACCTTATTGGACTGCGATTCTGAGGCTAAAACTAATTGGAAAACTTTCTCAGACCAAATCGGCAAGGGCCCAAAACCGAGGTGATAACATTACATCGGGGGAA

mRNA sequence

TTTCAATCCAACCAACCACCACCACCCACCGTCATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACCGCCACTCCCGTTGTCGTTCCGACGCAACGTGTCTTCTTCCGTTCACCTCGTCCCTAACGAGGCCGTTAACAAGCACGACGCTCGGAGGTGTACTAATAATGGCATCAAAATAGTGTGTCACGTATTTAACCCAAAGGAGCCGTCCAGTTCTCATAACGATGGCTTTCCTTTATTAAACACCAAAGAGGCTATGCAGTCACTGCTGTGCCTCCCTTTGGATGCGGCGGCGGAGGGTGAAACCAAAGACATAAGTGCAAACAAGAGAAAAGCTTTACAGGCATTGTTGGCTAATAATCCTTCAGGGGCTGAGAAGATAATGAAGAATGTGCTTCAAACATACGAAAAGGACAATATGCAGACTAAATATGAAGCTATCTTGGCAACAGTCGTAATTCTCATCCACACGGGAGGAAGAGAAAGCTTGGGTGATGCTATTCACCATCTGAACAAAATAGAAGAGTGGGACAATAAGCCAAGTGATGTAAAGCGTATCCTTTATCGGGCTGTTATATATACCTTATTGGACTGCGATTCTGAGGCTAAAACTAATTGGAAAACTTTCTCAGACCAAATCGGCAAGGGCCCAAAACCGAGGTGATAACATTACATCGGGGGAA

Coding sequence (CDS)

ATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACCGCCACTCCCGTTGTCGTTCCGACGCAACGTGTCTTCTTCCGTTCACCTCGTCCCTAACGAGGCCGTTAACAAGCACGACGCTCGGAGGTGTACTAATAATGGCATCAAAATAGTGTGTCACGTATTTAACCCAAAGGAGCCGTCCAGTTCTCATAACGATGGCTTTCCTTTATTAAACACCAAAGAGGCTATGCAGTCACTGCTGTGCCTCCCTTTGGATGCGGCGGCGGAGGGTGAAACCAAAGACATAAGTGCAAACAAGAGAAAAGCTTTACAGGCATTGTTGGCTAATAATCCTTCAGGGGCTGAGAAGATAATGAAGAATGTGCTTCAAACATACGAAAAGGACAATATGCAGACTAAATATGAAGCTATCTTGGCAACAGTCGTAATTCTCATCCACACGGGAGGAAGAGAAAGCTTGGGTGATGCTATTCACCATCTGAACAAAATAGAAGAGTGGGACAATAAGCCAAGTGATGTAAAGCGTATCCTTTATCGGGCTGTTATATATACCTTATTGGACTGCGATTCTGAGGCTAAAACTAATTGGAAAACTTTCTCAGACCAAATCGGCAAGGGCCCAAAACCGAGGTGA

Protein sequence

MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR

Homology

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BLAST of CmoCh18G004470 vs. ExPASy TrEMBL
Match: A0A6J1GTH1 (uncharacterized protein LOC111457324 OS=Cucurbita moschata OX=3662 GN=LOC111457324 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.4e-118
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60
           MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK
Sbjct: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60

Query: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120
           EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI
Sbjct: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120

Query: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180
           MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL
Sbjct: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180

Query: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR 214
           YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR
Sbjct: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR 213

[Close]

BLAST of CmoCh18G004470 vs. ExPASy TrEMBL
Match: A0A6J1K2L3 (uncharacterized protein LOC111490483 OS=Cucurbita maxima OX=3661 GN=LOC111490483 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 159/210 (75.71%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60
           MNSTALLHRGIAPT PLPLSFRRN+SSSVHLVPNE VNKHDARRC+NNGIKIVCH +N  
Sbjct: 1   MNSTALLHRGIAPTLPLPLSFRRNMSSSVHLVPNETVNKHDARRCSNNGIKIVCHRYNRM 60

Query: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120
           E S S NDGFP LNTK AMQSLLC  LDAAAE ETKDISA KRKALQALLANNP+ AE+I
Sbjct: 61  ESSGSQNDGFPFLNTKVAMQSLLCFSLDAAAEFETKDISAQKRKALQALLANNPAEAERI 120

Query: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180
           MK VLQ Y+ D ++ KYEA LA V ILIHTG R+SL DA+ +LN IE W  KPSD+KRIL
Sbjct: 121 MKKVLQKYKNDKVEIKYEATLAMVAILIHTGQRKSLSDAMLYLNDIEAWKAKPSDIKRIL 180

Query: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGP 211
           YRAVIYTLL+   +AK NWK FSD IG GP
Sbjct: 181 YRAVIYTLLESSIDAKDNWKIFSDNIGSGP 210

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BLAST of CmoCh18G004470 vs. ExPASy TrEMBL
Match: A0A6J1CHE7 (uncharacterized protein LOC111010906 OS=Momordica charantia OX=3673 GN=LOC111010906 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 91/211 (43.13%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 7   LHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSH 66
           L RGIAPTPPLPL+  RNVS      P ++  KH  R      I     V  P+   S  
Sbjct: 10  LRRGIAPTPPLPLAAFRNVS------PIQSNPKHRNRLNRVETIIRCGRVTRPRRSGSDR 69

Query: 67  NDGFPLLNTKEAMQSLLCLPLD----AAAEGETKDISANKRKALQALLANNPSGAEKIMK 126
           + GFPL NT  A+++LLC  +     AA       I+  K++ALQ L+A N   AE IM 
Sbjct: 70  SGGFPLPNTTTALKTLLCFTVGTDGWAAPAEHLTAINRKKKEALQKLMAENCVEAENIMM 129

Query: 127 NVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEW---DNKPSDVKRI 186
            V + Y+ DN QT+Y+A LA V  LIH G  ES   A+ HLN +E     +N PSD K  
Sbjct: 130 RVYEEYKWDNPQTRYDAALALVEFLIHRGTNESWEKAVGHLNDLEHMTMKENLPSDAKLP 189

Query: 187 LYRAVIYTLLDCDSEAKTNWKTFSDQIGKGP 211
           LY A++ TLLD D EAK +W  ++  IG GP
Sbjct: 190 LYWAILLTLLD-DREAKKSWSYYTSHIGTGP 213

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BLAST of CmoCh18G004470 vs. ExPASy TrEMBL
Match: A0A0A0LXK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G441330 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.4e-25
Identity = 87/234 (37.18%), Postives = 121/234 (51.71%), Query Frame = 0


Query: 1   MNSTALLHRGIA--PTPPLPLSF---------------RRNVSSSVHLVPNEAVNKHDAR 60
           M+STA+LHRG +  P PPLP +                  N  SSVHL+  ++ + +++R
Sbjct: 1   MDSTAVLHRGFSAPPRPPLPTTTPSSVLRPQLALFTFPSNNALSSVHLLLKKSNDNYNSR 60

Query: 61  ----RCTNNGIKIVCHVFNPKEPSSSHNDG--FPLLNTKEAMQSLLCLPLDAAAEGETKD 120
                  NN I I C   +   PS S NDG  FP+ N + A++SLLC    +     T  
Sbjct: 61  YGSLNKNNNVIDIQCTNLSTSVPSGS-NDGRNFPVANARLALKSLLCFSYSSKKADHTNF 120

Query: 121 ISANKRKALQALLANNPSGAEKIMKNVLQTYEKD-NMQTKYEAILATVVILIHTGGRESL 180
           ++  KRKAL ALL  NP  AEKI+K V   Y  + N Q +YEA +A + ILIH G  ESL
Sbjct: 121 LNNQKRKALLALLDQNPKEAEKIIKIVESKYRNNSNKQIQYEAKMAIIQILIHMGTPESL 180

Query: 181 GDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGP 211
             A+   ++I   + +PSD    LY AVI TL+  +     +WK + + I   P
Sbjct: 181 RWAVKKYSEITNMEERPSDATIFLYNAVIRTLIGDNKNIADHWKAYVNVITSDP 233

[Close]

BLAST of CmoCh18G004470 vs. ExPASy TrEMBL
Match: A0A1S3BA19 (uncharacterized protein LOC103487676 OS=Cucumis melo OX=3656 GN=LOC103487676 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 87/240 (36.25%), Postives = 121/240 (50.42%), Query Frame = 0


Query: 1   MNSTALLHRGI--APTPPLP--------------LSFRRNVSSSVHLVPNEA----VNKH 60
           M+STA+LHRG   AP P LP              L+FR NV SSVHL+  ++    +N++
Sbjct: 1   MDSTAVLHRGFSAAPQPRLPTTRPSVAGRQLLPLLTFRCNV-SSVHLLVKKSNDNCINRY 60

Query: 61  DAR---RCTNNG-IKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCL-PLDAAAEGET 120
            +R   +  NNG I I C   +        +  FP  N + A+QSLLC  P D   + +T
Sbjct: 61  GSRLNKKNNNNGIIDIQCGRESEIPWGDKDDANFPSPNARLALQSLLCFSPKD---DTDT 120

Query: 121 KDISANKRKALQALLANNPS----GAEKIMKNVLQTYEKD-NMQTKYEAILATVVILIHT 180
             I+  K  ALQALL   P+     A +IM  V + Y  D N   +YEA +A + ILIH 
Sbjct: 121 NTIAKAKISALQALLNKRPNEKRDRATEIMNKVYEKYRNDRNKYIQYEAKMAFIQILIHV 180

Query: 181 GGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGP 211
           G  +S   A   L ++E+   +PSD    LY+AVI TLL   S  K +W  +++     P
Sbjct: 181 GTNKSWSRAHEVLREVEK-QERPSDATFHLYKAVISTLLRAQS-PKVHWDNYTNLFDDDP 234

[Close]

BLAST of CmoCh18G004470 vs. NCBI nr
Match: XP_022955331.1 (uncharacterized protein LOC111457324 [Cucurbita moschata])

HSP 1 Score: 434.1 bits (1115), Expect = 6.9e-118
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60
           MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK
Sbjct: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60

Query: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120
           EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI
Sbjct: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120

Query: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180
           MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL
Sbjct: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180

Query: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR 214
           YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR
Sbjct: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR 213

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BLAST of CmoCh18G004470 vs. NCBI nr
Match: KAG6573362.1 (hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 190/213 (89.20%), Postives = 198/213 (92.96%), Query Frame = 0


Query: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60
           MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPN+ VNKHDARRCTNNGIKIVCHVFNPK
Sbjct: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNKTVNKHDARRCTNNGIKIVCHVFNPK 60

Query: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120
           EPSSSHN+GFPLL+TK AMQSLLCLPLDAAAEGETKDISANKR+AL+ALLANNPS AE I
Sbjct: 61  EPSSSHNNGFPLLDTKVAMQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENI 120

Query: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180
           MK VLQTYE  NMQTKY+A LA V ILIHTGGRESLG AI HLN IE WDNKPSDVKRIL
Sbjct: 121 MKKVLQTYENGNMQTKYDATLAMVAILIHTGGRESLGKAIEHLNTIEAWDNKPSDVKRIL 180

Query: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR 214
           YRAVIYTLL+ D+EAKTNWKTFSDQIGKGPKPR
Sbjct: 181 YRAVIYTLLERDTEAKTNWKTFSDQIGKGPKPR 213

[Close]

BLAST of CmoCh18G004470 vs. NCBI nr
Match: XP_023542455.1 (uncharacterized protein LOC111802357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.4 bits (960), Expect = 6.5e-100
Identity = 185/211 (87.68%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60
           MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNE VNKHDARRCTNNGIKIVCHVFNPK
Sbjct: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNETVNKHDARRCTNNGIKIVCHVFNPK 60

Query: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120
           EPSSSHN GFPLLNTK AMQSLLCLPLDAAAEGETKDISANKRKALQ LLANNPSGAEKI
Sbjct: 61  EPSSSHNHGFPLLNTKVAMQSLLCLPLDAAAEGETKDISANKRKALQELLANNPSGAEKI 120

Query: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180
           MK +LQ YE DNMQTKYEA LA V ILIHTGG ESL +AI +LN++E W+NKPSD KRIL
Sbjct: 121 MKKLLQRYENDNMQTKYEATLAMVAILIHTGGVESLRNAIRYLNELEAWNNKPSDAKRIL 180

Query: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGPK 212
           YRAVIYTLL+   +AKTNWKTFSDQIGKGPK
Sbjct: 181 YRAVIYTLLESQIDAKTNWKTFSDQIGKGPK 211

[Close]

BLAST of CmoCh18G004470 vs. NCBI nr
Match: XP_022994895.1 (uncharacterized protein LOC111490483 [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 2.1e-82
Identity = 159/210 (75.71%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 1   MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPK 60
           MNSTALLHRGIAPT PLPLSFRRN+SSSVHLVPNE VNKHDARRC+NNGIKIVCH +N  
Sbjct: 1   MNSTALLHRGIAPTLPLPLSFRRNMSSSVHLVPNETVNKHDARRCSNNGIKIVCHRYNRM 60

Query: 61  EPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKI 120
           E S S NDGFP LNTK AMQSLLC  LDAAAE ETKDISA KRKALQALLANNP+ AE+I
Sbjct: 61  ESSGSQNDGFPFLNTKVAMQSLLCFSLDAAAEFETKDISAQKRKALQALLANNPAEAERI 120

Query: 121 MKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRIL 180
           MK VLQ Y+ D ++ KYEA LA V ILIHTG R+SL DA+ +LN IE W  KPSD+KRIL
Sbjct: 121 MKKVLQKYKNDKVEIKYEATLAMVAILIHTGQRKSLSDAMLYLNDIEAWKAKPSDIKRIL 180

Query: 181 YRAVIYTLLDCDSEAKTNWKTFSDQIGKGP 211
           YRAVIYTLL+   +AK NWK FSD IG GP
Sbjct: 181 YRAVIYTLLESSIDAKDNWKIFSDNIGSGP 210

[Close]

BLAST of CmoCh18G004470 vs. NCBI nr
Match: KAG7012526.1 (hypothetical protein SDJN02_25278 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 8.9e-57
Identity = 116/135 (85.93%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 79  MQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYE 138
           MQSLLCLPLDAAAEGETKDISANKR+AL+ALLANNPS AE IMK VLQTYE  NMQTKY+
Sbjct: 1   MQSLLCLPLDAAAEGETKDISANKREALRALLANNPSRAENIMKKVLQTYENGNMQTKYD 60

Query: 139 AILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTN 198
           A LA V ILIH GGRESLG AI HLN IE WDNKPSDVKRILYRAVIYTLL+ D+EAKTN
Sbjct: 61  ATLAMVAILIHMGGRESLGKAIEHLNTIEAWDNKPSDVKRILYRAVIYTLLERDTEAKTN 120

Query: 199 WKTFSDQIGKGPKPR 214
           WKTFSDQIGKGPKPR
Sbjct: 121 WKTFSDQIGKGPKPR 135

[Close]

BLAST of CmoCh18G004470 vs. TAIR 10
Match: AT2G34540.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 35/116 (30.17%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 97  DISANKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESL 156
           DI + K +A++ +       A +++++    Y ++  +  +   +A V ILI     E  
Sbjct: 173 DIDSIKMEAVRKMKEGKCEEAVQLLRDANMRY-RNEPEANFNVQMALVEILILL---ERY 232

Query: 157 GDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKP 213
            +A  + + + + + + SDV+  LY+A+IYT+LD D+EAK  WK F   IG+G  P
Sbjct: 233 QEAAEY-SCLNDENAQISDVRIPLYKAIIYTMLDKDTEAKQCWKEFRKSIGEGFDP 283

The following BLAST results are available for this feature:

BLAST of CmoCh18G004470 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh18G004470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GTH1	3.4e-118	100.00	uncharacterized protein LOC111457324 OS=Cucurbita moschata OX=3662 GN=LOC1114573...	[more]
A0A6J1K2L3	1.0e-82	75.71	uncharacterized protein LOC111490483 OS=Cucurbita maxima OX=3661 GN=LOC111490483...	[more]
A0A6J1CHE7	1.0e-29	43.13	uncharacterized protein LOC111010906 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0LXK7	4.4e-25	37.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G441330 PE=4 SV=1	[more]
A0A1S3BA19	1.7e-16	36.25	uncharacterized protein LOC103487676 OS=Cucumis melo OX=3656 GN=LOC103487676 PE=...	[more]

BLAST of CmoCh18G004470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955331.1	6.9e-118	100.00	uncharacterized protein LOC111457324 [Cucurbita moschata]	[more]
KAG6573362.1	4.8e-103	89.20	hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023542455.1	6.5e-100	87.68	uncharacterized protein LOC111802357 [Cucurbita pepo subsp. pepo]	[more]
XP_022994895.1	2.1e-82	75.71	uncharacterized protein LOC111490483 [Cucurbita maxima]	[more]
KAG7012526.1	8.9e-57	85.93	hypothetical protein SDJN02_25278 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh18G004470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34540.2	2.0e-06	30.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36350:SF2	PROTEIN, PUTATIVE-RELATED	coord: 62..209
None	No IPR available	PANTHER	PTHR36350	TRANSMEMBRANE PROTEIN	coord: 62..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G004470.1	CmoCh18G004470.1	mRNA