CmoCh15G009260 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh15G009260
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr15: 4714466 .. 4714842 (+)
RNA-Seq ExpressionCmoCh15G009260
SyntenyCmoCh15G009260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGACAAGAGATCATCAGCTGGAGAGCTCCTTTTGGTGGGTTGGAAAGTACCAGCAAGTTTTGACACCATTGCTGGTGCTAACTGTCCTGTTGCTGGTGACCGAGGAACCGAGTTCAACGAGGGCGTCGGGAATTCTCGACTGCCATTGAGACTCGGGTTTGAGCTGCTACCATTTCTAACCAACTAAATATTTTATTTTGACTAGAATGTGAGTACCTACCTGTATACTACATCAGAAATATCCATCCCCAAATGGATGTATAAATATGGTTGCAAGGGGAAGGAGCTAAATTGTAAATGCTCATATTTTTAAGACCTCTTCTAAACATCTTTATAGTTGGTTGGCTTAGGCTCTTCATTTTGGCTTCTTAA

mRNA sequence

ATGAATGACAAGAGATCATCAGCTGGAGAGCTCCTTTTGGTGGGTTGGAAAGTACCAGCAAGTTTTGACACCATTGCTGGTGCTAACTGTCCTGTTGCTGGTGACCGAGGAACCGAGTTCAACGAGGGCGTCGGGAATTCTCGACTGCCATTGAGACTCGGGCTCTTCATTTTGGCTTCTTAA

Coding sequence (CDS)

ATGAATGACAAGAGATCATCAGCTGGAGAGCTCCTTTTGGTGGGTTGGAAAGTACCAGCAAGTTTTGACACCATTGCTGGTGCTAACTGTCCTGTTGCTGGTGACCGAGGAACCGAGTTCAACGAGGGCGTCGGGAATTCTCGACTGCCATTGAGACTCGGGCTCTTCATTTTGGCTTCTTAA

Protein sequence

MNDKRSSAGELLLVGWKVPASFDTIAGANCPVAGDRGTEFNEGVGNSRLPLRLGLFILAS
Homology
[Close]
BLAST of CmoCh15G009260 vs. NCBI nr
Match: KAG7016697.1 (hypothetical protein SDJN02_21807, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.8 bits (286), Expect = 2.6e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MNDKRSSAGELLLVGWKVPASFDTIAGANCPVAGDRGTEFNEGVGNSRLPLRLG 55
          MNDKRSSAGELLLVGWKVPASFDTIAGANCPVAGDRGTEFNEGVGNSRLPLRLG
Sbjct: 1  MNDKRSSAGELLLVGWKVPASFDTIAGANCPVAGDRGTEFNEGVGNSRLPLRLG 54

[Close]
BLAST of CmoCh15G009260 vs. NCBI nr
Match: KAG6579182.1 (Histidine kinase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 8    AGELLLVGWKVPASFDTIAGANCPVAGDRGTEFNEGVGNSRLPLRLGLFIL 59
            AGELLLVGWKVPASFDTIAGANCPVAGDRGTEFNEGVGNSRLPLRLG  +L
Sbjct: 956  AGELLLVGWKVPASFDTIAGANCPVAGDRGTEFNEGVGNSRLPLRLGFELL 1006

The following BLAST results are available for this feature:
BLAST of CmoCh15G009260 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh15G009260 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh15G009260 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7016697.12.6e-22100.00hypothetical protein SDJN02_21807, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6579182.11.8e-1894.12Histidine kinase 4, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmoCh15G009260 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G009260.1CmoCh15G009260.1mRNA