Cmc08g0232651 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTTGTTCTGCGGCAACTCCCTGTTCGCTATCTTGGGCTTCCATTACTTTCGGGTAGGTTATGTCCTACTAATTTTGCTCCTTTTATTCAACGTATAACTAGCCGGATTTGCTTATGGGCTATAAGAGTTTTATCGTTTGCTGGGAGATTGCAACTTGTTTGTGCTATTCTACGCAATTTTCAAGTTTACTAGGCTAGTGCGTTTTTGTTGCCTGCGAGTGTGCATCATGAGGTGGATAAAATTCCGAGGTCTTATCTTTGGAAGGGTAAGGAGGATGGTAAGGGGGGTGTTAAGGTGGCTTGGGAGGAGGTGTGTCTTCCTTTTGAGGAGGGAGGGCTCGCTATAAGTGATAGGCCTTCTTGGAATATAGCAAGTTCTATGAAGATTCTTTGGTCGTTGCTAGTGAATTCTTGCTCTCTTTGGGTGACTTGGGTGGAAGCTTACATTCTTAAGGGGAGATCATTGTGGGCTGTTGATAGTGGGGTTGGTTGGTCTTGGTGCTTCAGGCTATCTTACGTAAGCGGATAGTCTAAAAGGACTTGTTTGTATGGAGGTGGGAGATGAGATGAGGTGTCGAGTTTGGCTTGATCCATGGTTGCAGAGTAATCCTATCCTTGAGCAGGTTGCGAAGAGGGTGCTTTATGACAGGACGAGTCAGAGGGAGGCTAGACTTTCTGAGTTTCTTGGTCTGAATGGGGAGTGGAGGTAGCTGTGTGTTTCTTTGGAGTTGGTTAATTTATGGGATAGGATTCAAGCTATTTGTCAGTGTCTTAATGTTAGGGATAGATGGGTCTGGGTTCCTGGCAGTCAGGGTGGTTTTTTTATAGCGAGTGCATGGGATACGATTCATCCTCGGAGTAGTCAGGTCCCTTGGCTGGTTTATTGTGGGATGGGGGTAATGTTCCTAAACATTCTTTTTGTACTTGGCTTGCCATTAAAGATAGGTTGAGTATGAGAGATAGGTTAAGTAGGTGGGATAGTTCAGTTTCATTGTCTTGCATTCTTTGTCCGGGAGGTGTCGAGTCTCGTGATCATTTGTTCTTTTCATGTCCTTTTGGGAGGGTTGTTTGGTCTCAGGTCCTTCTGGTTATGGCTTCCTCTCACAGGACTGGGTATTAG ATGGGTTTTGTTCTGCGGCAACTCCCTGTTCGCTATCTTGGGCTTCCATTACTTTCGGGTAGGTTATGTCCTACTAATTTTGCTCCTTTTATTCAACGTATAACTAGCCGGATTTGCTTATGGGCTATAAGAGTTTTATCGTTTGCTGGGAGATTGCAACTTGTGGATAAAATTCCGAGGTCTTATCTTTGGAAGGGTAAGGAGGATGGTAAGGGGGGTGTTAAGGTGGCTTGGGAGGAGGTGTGTCTTCCTTTTGAGGAGGGAGGGCTCGCTATAAGTGATAGGCCTTCTTGGAATATAGCAAGTTCTATGAAGATTCTTTGGTCGTTGCTAGTGAATTCTTGCTCTCTTTGGGTGACTTGGGTGGAAGCTTACATTCTTAAGGGGAGATCATTGTGGGCTGTTGATAGTGGGTCAGGTCCCTTGGCTGGTTTATTGTGGGATGGGGGTAATGTTCCTAAACATTCTTTTTGTACTTGGCTTGCCATTAAAGATAGGTTGAGTATGAGAGATAGGTTAAGTAGGTGGGATAGTTCAGTTTCATTGTCTTGCATTCTTTGTCCGGGAGGTGTCGAGTCTCGTGATCATTTGTTCTTTTCATGTCCTTTTGGGAGGGTTGTTTGGTCTCAGGTCCTTCTGGTTATGGCTTCCTCTCACAGGACTGGGTATTAG ATGGGTTTTGTTCTGCGGCAACTCCCTGTTCGCTATCTTGGGCTTCCATTACTTTCGGGTAGGTTATGTCCTACTAATTTTGCTCCTTTTATTCAACGTATAACTAGCCGGATTTGCTTATGGGCTATAAGAGTTTTATCGTTTGCTGGGAGATTGCAACTTGTGGATAAAATTCCGAGGTCTTATCTTTGGAAGGGTAAGGAGGATGGTAAGGGGGGTGTTAAGGTGGCTTGGGAGGAGGTGTGTCTTCCTTTTGAGGAGGGAGGGCTCGCTATAAGTGATAGGCCTTCTTGGAATATAGCAAGTTCTATGAAGATTCTTTGGTCGTTGCTAGTGAATTCTTGCTCTCTTTGGGTGACTTGGGTGGAAGCTTACATTCTTAAGGGGAGATCATTGTGGGCTGTTGATAGTGGGTCAGGTCCCTTGGCTGGTTTATTGTGGGATGGGGGTAATGTTCCTAAACATTCTTTTTGTACTTGGCTTGCCATTAAAGATAGGTTGAGTATGAGAGATAGGTTAAGTAGGTGGGATAGTTCAGTTTCATTGTCTTGCATTCTTTGTCCGGGAGGTGTCGAGTCTCGTGATCATTTGTTCTTTTCATGTCCTTTTGGGAGGGTTGTTTGGTCTCAGGTCCTTCTGGTTATGGCTTCCTCTCACAGGACTGGGTATTAG MGFVLRQLPVRYLGLPLLSGRLCPTNFAPFIQRITSRICLWAIRVLSFAGRLQLVDKIPRSYLWKGKEDGKGGVKVAWEEVCLPFEEGGLAISDRPSWNIASSMKILWSLLVNSCSLWVTWVEAYILKGRSLWAVDSGSGPLAGLLWDGGNVPKHSFCTWLAIKDRLSMRDRLSRWDSSVSLSCILCPGGVESRDHLFFSCPFGRVVWSQVLLVMASSHRTGY Homology
BLAST of Cmc08g0232651 vs. NCBI nr
Match: XP_031737043.1 (uncharacterized protein LOC116402131 [Cucumis sativus]) HSP 1 Score: 275.0 bits (702), Expect = 5.6e-70 Identity = 163/368 (44.29%), Postives = 186/368 (50.54%), Query Frame = 0
BLAST of Cmc08g0232651 vs. NCBI nr
Match: KAA0046851.1 (uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 254.2 bits (648), Expect = 1.0e-63 Identity = 146/321 (45.48%), Postives = 162/321 (50.47%), Query Frame = 0
BLAST of Cmc08g0232651 vs. NCBI nr
Match: TYK28099.1 (uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 242.3 bits (617), Expect = 4.1e-60 Identity = 141/278 (50.72%), Postives = 163/278 (58.63%), Query Frame = 0
BLAST of Cmc08g0232651 vs. NCBI nr
Match: KAA0057642.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 239.2 bits (609), Expect = 3.4e-59 Identity = 146/323 (45.20%), Postives = 163/323 (50.46%), Query Frame = 0
BLAST of Cmc08g0232651 vs. NCBI nr
Match: TYK19523.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 239.2 bits (609), Expect = 3.4e-59 Identity = 146/323 (45.20%), Postives = 163/323 (50.46%), Query Frame = 0
BLAST of Cmc08g0232651 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11 Identity = 45/153 (29.41%), Postives = 67/153 (43.79%), Query Frame = 0
BLAST of Cmc08g0232651 vs. ExPASy TrEMBL
Match: A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 5.0e-64 Identity = 146/321 (45.48%), Postives = 162/321 (50.47%), Query Frame = 0
BLAST of Cmc08g0232651 vs. ExPASy TrEMBL
Match: A0A5D3DXE4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00020 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 2.0e-60 Identity = 141/278 (50.72%), Postives = 163/278 (58.63%), Query Frame = 0
BLAST of Cmc08g0232651 vs. ExPASy TrEMBL
Match: A0A5A7UP65 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00070 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.7e-59 Identity = 146/323 (45.20%), Postives = 163/323 (50.46%), Query Frame = 0
BLAST of Cmc08g0232651 vs. ExPASy TrEMBL
Match: A0A5D3D7P6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00080 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.7e-59 Identity = 146/323 (45.20%), Postives = 163/323 (50.46%), Query Frame = 0
BLAST of Cmc08g0232651 vs. ExPASy TrEMBL
Match: A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 3.7e-59 Identity = 145/322 (45.03%), Postives = 162/322 (50.31%), Query Frame = 0
BLAST of Cmc08g0232651 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24 Identity = 88/332 (26.51%), Postives = 125/332 (37.65%), Query Frame = 0
BLAST of Cmc08g0232651 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 72.4 bits (176), Expect = 5.2e-13 Identity = 30/63 (47.62%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of Cmc08g0232651 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 72.4 bits (176), Expect = 5.2e-13 Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of Cmc08g0232651 vs. TAIR 10
Match: AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 71.6 bits (174), Expect = 8.8e-13 Identity = 32/66 (48.48%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of Cmc08g0232651 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 68.9 bits (167), Expect = 5.7e-12 Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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