CmaCh03G008450 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G008450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr03: 6348954 .. 6350747 (+)
RNA-Seq Expression	CmaCh03G008450
Synteny	CmaCh03G008450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATATAAGAGACTTTGTAAAATTTCAATGTAAATTGGGCATTTAGTTGTGGGTGGAAATGCTATAATCTGAGGGGAAACAATCTGCTTCTTCGATTTCTCCGCCCTGAGAGATTTCAGAAATCCCAAATTCTTGTTTCGAGGTATGAAGTCGGTGTTCAGCGGATTTTCCCCATTTTGTTTTTGAGTGGCGATCTAGCGAATGACGGACGATCTTGGTTTTCTTATCCGGTTAATCTTTCGAACTCGATTTATTTTTTTGTTGTCGCTGTGGCTCGCATTTTTAGAGCAACAACTGATATATTCGTAGAGGAGTGGGATAAGATTCTTGATTGTGTCTGGGCCTGAAAGTGACTTCTGAGCTTTTGCAAATAGCTTGAGTGAACTCTGTTTGGATGCTTTCTGGGTTCTGAGTAATTGGAGAAGAAATTTTGGAGAACTTTCATATTGATCGTTTGAGATCTAGATAGGAGTTTTCGTAGTTTTTTCTTTTTATTTATTTATTTTTTTCATTTTCCATATGGAGGTTACTGATCAAACAGGCCCCATCAGCCACTCCTTTCCATTTTGAGATTCTACCTGTAAATTCTATGGGGAAAACCTTTTAGTTTCCTTATTAAATTTTCCCCCAAAACTCTTTCACTCGTCTGGAGAAGAACCGATGGCCGTGTCTTTCAGCCGTTTTTCATTGTGGTTTTGGAAGGGGAAGGAGAAAGAGTCTGTCGCAAATGGGGCGCCTTCAAATTCTTCCACCGAGGTTGGTACTGGTCTGAGAGAACCGGAGAGTCTCAAGTTGAAGAGGGTGGACTTGGGTTCATTTTCAAAGAAGGTCAAGAACCAGAAATGGCGAAGTAAGAAAGAAACAACAAGGATTGACTGGGAATACGATTTTCTGATTGTACCATCTGGCGGTGATGACATGCAAATGCCTGACTCTGCTGATGAGGCCGATTGGTCTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTCAGAGTGATGATAGTTTTGCCGTTCTGGTCCCTTCCTATAGCAATCGTTGCAAAGAGGTGGTGGAGGGTTCAAACGTCGAGCTTTTGGCTGCCATAAAAAACCTTCAACATGAATTCTCACCTGGTAAGGCCTTTCTGTTTGTGGTCTGCATTATACTGTTATTTGACCCAATGCCTTGTGTCTGCCATTAGTTTATGAATTTTTCTACATGATTCTAAAGCCGATTTTGGAAGCGTAGAACATTCTTTGTGATCTTTATATGATTACTGTTGCAGCTGGGATATAAAGTATTGAATGGTTGTTAAGAGACACCATTCCTAAAATTTGGGAACACATTGATTGGGCATGTTTTGGAGCTGTTTTCAGTAATGTTGTTTGTTTTGTGTTTCAAGACAAAACTGACTTGTAAAGGTTAAGGTTGTGATTTCAAATGAACAACAACTTTAATTGGTTTAAAAGAGGCTACATGGTAGAACAGATACAAGAACAAATGAGTTAGAAACAACTTTTAATAACAGTCACATGCACTTGTTTTTCTTGAATCCTTGTATAAAAAAACAGCATGCTTCTCAAAAGAGTTACCAAACAATTCATAGATGTTACCAATTGTTGTGTTTTCTCCATAGTCCTGTGCATGCTGGAATCAAGAGGCGGTGGATGAATAGCCGCAAGCCTGCAATAAGTCATTGAATCTTTTCTCTGTAGGAAAAAAAACAAGTTTTTTTTTGTTATATATTGTAGTGGACTGGGCTCTATCTCATCTCTTGTGTGCATATCAGAAGTTACTGTTCCAAATTTCATGA

mRNA sequence

AAATATAAGAGACTTTGTAAAATTTCAATGTAAATTGGGCATTTAGTTGTGGGTGGAAATGCTATAATCTGAGGGGAAACAATCTGCTTCTTCGATTTCTCCGCCCTGAGAGATTTCAGAAATCCCAAATTCTTGTTTCGAGGTATGAAGTCGGTGTTCAGCGGATTTTCCCCATTTTGTTTTTGAGTGGCGATCTAGCGAATGACGGACGATCTTGGTTTTCTTATCCGGTTAATCTTTCGAACTCGATTTATTTTTTTGTTGTCGCTGTGGCTCGCATTTTTAGAGCAACAACTGATATATTCGTAGAGGAGTGGGATAAGATTCTTGATTGTGTCTGGGCCTGAAAGTGACTTCTGAGCTTTTGCAAATAGCTTGAGTGAACTCTGTTTGGATGCTTTCTGGGTTCTGAGTAATTGGAGAAGAAATTTTGGAGAACTTTCATATTGATCGTTTGAGATCTAGATAGGAGTTTTCGTAGTTTTTTCTTTTTATTTATTTATTTTTTTCATTTTCCATATGGAGGTTACTGATCAAACAGGCCCCATCAGCCACTCCTTTCCATTTTGAGATTCTACCTGTAAATTCTATGGGGAAAACCTTTTAGTTTCCTTATTAAATTTTCCCCCAAAACTCTTTCACTCGTCTGGAGAAGAACCGATGGCCGTGTCTTTCAGCCGTTTTTCATTGTGGTTTTGGAAGGGGAAGGAGAAAGAGTCTGTCGCAAATGGGGCGCCTTCAAATTCTTCCACCGAGGTTGGTACTGGTCTGAGAGAACCGGAGAGTCTCAAGTTGAAGAGGGTGGACTTGGGTTCATTTTCAAAGAAGGTCAAGAACCAGAAATGGCGAAGTAAGAAAGAAACAACAAGGATTGACTGGGAATACGATTTTCTGATTGTACCATCTGGCGGTGATGACATGCAAATGCCTGACTCTGCTGATGAGGCCGATTGGTCTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTCAGAGTGATGATAGTTTTGCCGTTCTGGTCCCTTCCTATAGCAATCGTTGCAAAGAGGTGGTGGAGGGTTCAAACGTCGAGCTTTTGGCTGCCATAAAAAACCTTCAACATGAATTCTCACCTGTGGACTGGGCTCTATCTCATCTCTTGTGTGCATATCAGAAGTTACTGTTCCAAATTTCATGA

Coding sequence (CDS)

ATGGCCGTGTCTTTCAGCCGTTTTTCATTGTGGTTTTGGAAGGGGAAGGAGAAAGAGTCTGTCGCAAATGGGGCGCCTTCAAATTCTTCCACCGAGGTTGGTACTGGTCTGAGAGAACCGGAGAGTCTCAAGTTGAAGAGGGTGGACTTGGGTTCATTTTCAAAGAAGGTCAAGAACCAGAAATGGCGAAGTAAGAAAGAAACAACAAGGATTGACTGGGAATACGATTTTCTGATTGTACCATCTGGCGGTGATGACATGCAAATGCCTGACTCTGCTGATGAGGCCGATTGGTCTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTCAGAGTGATGATAGTTTTGCCGTTCTGGTCCCTTCCTATAGCAATCGTTGCAAAGAGGTGGTGGAGGGTTCAAACGTCGAGCTTTTGGCTGCCATAAAAAACCTTCAACATGAATTCTCACCTGTGGACTGGGCTCTATCTCATCTCTTGTGTGCATATCAGAAGTTACTGTTCCAAATTTCATGA

Protein sequence

MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQKWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNVELLAAIKNLQHEFSPVDWALSHLLCAYQKLLFQIS

Homology

[Close]

BLAST of CmaCh03G008450 vs. ExPASy TrEMBL
Match: A0A6J1IUD7 (uncharacterized protein LOC111478669 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478669 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSPV 153
           PSYSNRCKEVVEGSNVELLAAIKNLQHEFSPV
Sbjct: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSPV 152

[Close]

BLAST of CmaCh03G008450 vs. ExPASy TrEMBL
Match: A0A6J1IP42 (uncharacterized protein LOC111478669 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478669 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.9e-82
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP
Sbjct: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of CmaCh03G008450 vs. ExPASy TrEMBL
Match: A0A6J1GF21 (uncharacterized protein LOC111453604 OS=Cucurbita moschata OX=3662 GN=LOC111453604 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.2e-79
Identity = 146/151 (96.69%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANG PSNS +EVGTGLREPESLKLKRVDLGS SKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGGPSNSPSEVGTGLREPESLKLKRVDLGSSSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRC+EVVEGSNVELLAAIKNLQHEFSP
Sbjct: 121 PSYSNRCREVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of CmaCh03G008450 vs. ExPASy TrEMBL
Match: A0A5D3CMT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003280 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 129/151 (85.43%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVS SRFSLWFW GKEKE+VANG+  NSS+E GTGLREPESLK KRVDL S SKKV  Q
Sbjct: 1   MAVSLSRFSLWFWNGKEKETVANGSTPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KW+SKKE TRI+WEYDF++VPSGGDDMQM DS DEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWQSKKE-TRIEWEYDFVMVPSGGDDMQMSDSGDEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRCKEVVEGSNVELLAAIK LQ+EFSP
Sbjct: 121 PSYSNRCKEVVEGSNVELLAAIKKLQNEFSP 150

[Close]

BLAST of CmaCh03G008450 vs. ExPASy TrEMBL
Match: A0A1S3B0X6 (uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484930 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 129/151 (85.43%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVS SRFSLWFW GKEKE+VANG+  NSS+E GTGLREPESLK KRVDL S SKKV  Q
Sbjct: 1   MAVSLSRFSLWFWNGKEKETVANGSTPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KW+SKKE TRI+WEYDF++VPSGGDDMQM DS DEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWQSKKE-TRIEWEYDFVMVPSGGDDMQMSDSGDEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRCKEVVEGSNVELLAAIK LQ+EFSP
Sbjct: 121 PSYSNRCKEVVEGSNVELLAAIKKLQNEFSP 150

[Close]

BLAST of CmaCh03G008450 vs. NCBI nr
Match: XP_022978828.1 (uncharacterized protein LOC111478669 isoform X2 [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 4.9e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSPV 153
           PSYSNRCKEVVEGSNVELLAAIKNLQHEFSPV
Sbjct: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSPV 152

[Close]

BLAST of CmaCh03G008450 vs. NCBI nr
Match: XP_022978826.1 (uncharacterized protein LOC111478669 isoform X1 [Cucurbita maxima])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP
Sbjct: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of CmaCh03G008450 vs. NCBI nr
Match: XP_023544309.1 (uncharacterized protein LOC111803923 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANGAPSNSS+EVGTGLREPESLKLKRVDLGS SKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSSEVGTGLREPESLKLKRVDLGSSSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVP GGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPPGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP
Sbjct: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of CmaCh03G008450 vs. NCBI nr
Match: KAG7034233.1 (hypothetical protein SDJN02_03960, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.4 bits (781), Expect = 3.0e-79
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANGAPSNS +EVGTGLREPESLKLKRVDLGS SKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSPSEVGTGLREPESLKLKRVDLGSSSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRC+EVVEGSNVELLAAIKNLQHEFSP
Sbjct: 121 PSYSNRCREVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of CmaCh03G008450 vs. NCBI nr
Match: XP_022950521.1 (uncharacterized protein LOC111453604 [Cucurbita moschata])

HSP 1 Score: 303.9 bits (777), Expect = 8.7e-79
Identity = 146/151 (96.69%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFSKKVKNQ 60
           MAVSFSRFSLWFWKGKEKESVANG PSNS +EVGTGLREPESLKLKRVDLGS SKKVKNQ
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGGPSNSPSEVGTGLREPESLKLKRVDLGSSSKKVKNQ 60

Query: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120
           KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV
Sbjct: 61  KWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVLV 120

Query: 121 PSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 152
           PSYSNRC+EVVEGSNVELLAAIKNLQHEFSP
Sbjct: 121 PSYSNRCREVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of CmaCh03G008450 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-10
Identity = 36/78 (46.15%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 82  SGGDDMQMPDSADEADWSIGWLEPHGPGFQSDD-----SFAVLVPSYSNRCKEVVEGS-- 141
           S G +     + D  +WS+GW EPHGP FQSDD      F VLVP Y    + VVEGS  
Sbjct: 47  SSGSESVDVVAGDGPEWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY----RAVVEGSSN 106

Query: 142 -NVELLAAIKNLQHEFSP 152
            N +LL+A+KNL +   P
Sbjct: 107 NNNQLLSAVKNLPNGLPP 120

[Close]

BLAST of CmaCh03G008450 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-10
Identity = 36/78 (46.15%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 82  SGGDDMQMPDSADEADWSIGWLEPHGPGFQSDD-----SFAVLVPSYSNRCKEVVEGS-- 141
           S G +     + D  +WS+GW EPHGP FQSDD      F VLVP Y    + VVEGS  
Sbjct: 47  SSGSESVDVVAGDGPEWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY----RAVVEGSSN 106

Query: 142 -NVELLAAIKNLQHEFSP 152
            N +LL+A+KNL +   P
Sbjct: 107 NNNQLLSAVKNLPNGLPP 120

[Close]

BLAST of CmaCh03G008450 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 50/154 (32.47%), Postives = 72/154 (46.75%), Query Frame = 0


Query: 1   MAVSFSRFSLWFWKG------KEKESVANGAPSNSSTEVGTGLREPESLKLKRVDLGSFS 60
           MAVSF R   W   G      ++KES+  G+ S S          P   K      GS S
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLS----------PSLKKTTTSKTGSSS 60

Query: 61  KKVKNQK--WRSKKETTRIDWEYDFLIVPSGGDDMQMPD----SADEADWSIGWLEPHGP 120
             VK  K  W  +  +             SGG++ ++ +      D+ +WSIGW+EPHGP
Sbjct: 61  SSVKKTKRGWIGRGGS------------GSGGEEDKIGNVVFPEPDDPEWSIGWVEPHGP 120

Query: 121 GFQSDD----SFAVLVPSYSNRCKEVVEGSNVEL 139
           GF+++D     F VLVP Y    K+V++GS  ++
Sbjct: 121 GFKAEDDDCGGFVVLVPLY----KKVMDGSGNQI 128

The following BLAST results are available for this feature:

BLAST of CmaCh03G008450 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G008450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUD7	2.4e-82	100.00	uncharacterized protein LOC111478669 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IP42	6.9e-82	100.00	uncharacterized protein LOC111478669 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GF21	4.2e-79	96.69	uncharacterized protein LOC111453604 OS=Cucurbita moschata OX=3662 GN=LOC1114536...	[more]
A0A5D3CMT4	2.8e-67	85.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B0X6	2.8e-67	85.43	uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CmaCh03G008450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978828.1	4.9e-82	100.00	uncharacterized protein LOC111478669 isoform X2 [Cucurbita maxima]	[more]
XP_022978826.1	1.4e-81	100.00	uncharacterized protein LOC111478669 isoform X1 [Cucurbita maxima]	[more]
XP_023544309.1	1.3e-79	98.01	uncharacterized protein LOC111803923 [Cucurbita pepo subsp. pepo]	[more]
KAG7034233.1	3.0e-79	97.35	hypothetical protein SDJN02_03960, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022950521.1	8.7e-79	96.69	uncharacterized protein LOC111453604 [Cucurbita moschata]	[more]

BLAST of CmaCh03G008450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38060.2	3.1e-10	46.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G38060.1	3.1e-10	46.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G65480.1	1.6e-09	32.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..38
None	No IPR available	PANTHER	PTHR34464	OS09G0376300 PROTEIN	coord: 1..160
None	No IPR available	PANTHER	PTHR34464:SF8	BNAC03G61080D PROTEIN	coord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G008450.1	CmaCh03G008450.1	mRNA