Clc09G20935 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G20935
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	glutaredoxin
Location	ClcChr09: 34466824 .. 34468293 (-)
RNA-Seq Expression	Clc09G20935
Synteny	Clc09G20935

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGGAGAAGACTAAAGAGATAGTGGCTTCCAATCCCGTCACCGTCTTCAGGTTTCTCTCTCCATCTTTGCCTTTATATATGAATCTATTTGTCGGAAGGATTTTCGCTGATTGCTACAATGGATGATGTTTTTTGTTCTTCACAGCAAGACTTATTGTCCGTACTGCGTTCAGGTGAAGAGATTGTTGACTAAACTGGGAGCCAGTTTTAAGGCTGTTGAATTGGATACTGAGAGTACGTAGTCAATATTTATTCGTTTGATTTTTTTAATCTCGTACTGTCTTCTGCGTTCTGCTGCTTGCGGATTTAGGTTTGGTAACGATTTCATTGTTTTATTGTAGCTACTTGAAATTAATGGAATTTTGATTGTCCTTGTATTATGTTTCGTTGTTGTGCTTGGATTTGTGAGCTATTTCTCCCGATCCTTTGGTATTCGGATTTTGTAATTTAACTTGTTCGTGGATGTTGTTTACGGAGAGATCTATCTTTCGATGCATGTTCTTGCTCCGATTCTTTAAGAGAAGGAAAACTTTCAAAAGGAGAACGAAAAGCGTTTTTAACTATTCATTGGTTGTCGTGAATCAACTGTTGACGTTTTTGGAATGTCTTTTCATGCTCCATAGTGTTAAATTGGATTCAATTTGAATGATGGATATTGGAAAGGAATCTAAAGAAAAGACAAGTAGGGACATCCATTAAATGTTTGATTACTGGTACGGAGACTTCGTTTATTCTTTAGTATTCCATCTTTTTGGCCGCGAAAACATCGAATATTTCGACCTTTGGTTAAATTCAACTGGGTCCATCACAATCTTTTCGCAGCTTTAGGTGCAACTTTGCCTTGATTGCAGAATAGGATTCTTTAATCGTATTTTATTGACTTTTCTTTGTTTGCACGATTCTTTGACAATCATCAATTTTTTTATATGGTTTCAAAGCTTTCTAGTCATGCATAGCATAGAATACAATTTGGCTGCTGATTAATTGGATTAAATTGATTTTAAAGGTGATGGAAGTGAGGTACAAGCAGCACTTTTTCAGTTCACTGGACAGCGGACCGTGCCCAATGTATTCATAGGTGGAAAGCACATCGGTGGCTGTGATGGTAAATATTTACTACCCTCTAATATTGCATTTATTTAAAGCTTGAATTTAGTGGTGAGTATCAAAATAGAAGCCTTAAATTTGAACTCTTGCCTTGTCATTTCTTTTTTAATTGATATCAGTGCTTCACACCTTAAGTTTTGTAAAATCAAATTACTATACTCAACCCCACATATGAGAAAATTAAGAGTTAATATACCATAATTTATCAGCCTAAGCCTTTTTCTCCCTAACTTTTTTACAAAGATTTCTTTTTTTCTTTTTGGTTGCTTGGCAGCAACGGTGGCACTGAATGGTAAAGGGGGACTGGTTCCTCTGCTGGCTGAAGCCGGAGCAATTGCCAAAGTTTCTGCTGCCTAG

mRNA sequence

ATGGCGTTGGAGAAGACTAAAGAGATAGTGGCTTCCAATCCCGTCACCGTCTTCAGCAAGACTTATTGTCCGTACTGCGTTCAGGTGAAGAGATTGTTGACTAAACTGGGAGCCAGTTTTAAGGCTGTTGAATTGGATACTGAGAGTGATGGAAGTGAGGTACAAGCAGCACTTTTTCAGTTCACTGGACAGCGGACCGTGCCCAATGTATTCATAGGTGGAAAGCACATCGGTGGCTGTGATGCAACGGTGGCACTGAATGGTAAAGGGGGACTGGTTCCTCTGCTGGCTGAAGCCGGAGCAATTGCCAAAGTTTCTGCTGCCTAG

Coding sequence (CDS)

ATGGCGTTGGAGAAGACTAAAGAGATAGTGGCTTCCAATCCCGTCACCGTCTTCAGCAAGACTTATTGTCCGTACTGCGTTCAGGTGAAGAGATTGTTGACTAAACTGGGAGCCAGTTTTAAGGCTGTTGAATTGGATACTGAGAGTGATGGAAGTGAGGTACAAGCAGCACTTTTTCAGTTCACTGGACAGCGGACCGTGCCCAATGTATTCATAGGTGGAAAGCACATCGGTGGCTGTGATGCAACGGTGGCACTGAATGGTAAAGGGGGACTGGTTCCTCTGCTGGCTGAAGCCGGAGCAATTGCCAAAGTTTCTGCTGCCTAG

Protein sequence

MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQFTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSAA

Homology

[Close]

BLAST of Clc09G20935 vs. NCBI nr
Match: XP_038889541.1 (glutaredoxin-like [Benincasa hispida])

HSP 1 Score: 197.2 bits (500), Expect = 7.2e-47
Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEKTKEIVASNPVTVFSK+YCPYCVQVKRLLTKLGASFKAVELD ESDG +VQAAL Q
Sbjct: 1   MALEKTKEIVASNPVTVFSKSYCPYCVQVKRLLTKLGASFKAVELDIESDGRDVQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           FTGQRTVPNVFIGGKHIGGCD TVALNGKGGLVP+LAEAGAIAKVSA
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTVALNGKGGLVPMLAEAGAIAKVSA 107

[Close]

BLAST of Clc09G20935 vs. NCBI nr
Match: XP_022993774.1 (glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 3.4e-44
Identity = 96/107 (89.72%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK K+IVASNPV VFSKT CPYCVQVKRLLT LGA+FKAVELDTESDGSE+QAAL Q
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQRTVPNVFIGGKHIGGCDATVALN KGGLVPLLAEAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Clc09G20935 vs. NCBI nr
Match: KAG7016200.1 (hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.8 bits (473), Expect = 9.8e-44
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK K+IV SNPV VFSKT CPYCVQVKRLLT LGA+FKAVELDTESDGSE+QAAL Q
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQRTVPNVFIGGKHIGGCDATVALN KGGLVPLLAEAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Clc09G20935 vs. NCBI nr
Match: KAG6578661.1 (Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.8 bits (473), Expect = 9.8e-44
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK K+IV SNPV VFSKT CPYCVQVKRLLT LGA+FKAVELDTESDGSE+QAAL Q
Sbjct: 315 MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 374

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQRTVPNVFIGGKHIGGCDATVALN KGGLVPLLAEAGA AKVSA
Sbjct: 375 WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 421

[Close]

BLAST of Clc09G20935 vs. NCBI nr
Match: XP_008458784.1 (PREDICTED: glutaredoxin-C6 [Cucumis melo] >KAA0037552.1 glutaredoxin-C6 [Cucumis melo var. makuwa])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK KEIVASNPVTVFSK+YCP+CVQVKRLLTKLG SFKA+ELDTESDG EVQAAL Q
Sbjct: 1   MALEKAKEIVASNPVTVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREVQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           FTGQRTVPNVFIGGKHIGGCD T+ALN  G LVPLLAEAGAIAKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Clc09G20935 vs. ExPASy Swiss-Prot
Match: Q9ZR41 (Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-39
Identity = 81/108 (75.00%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           M+L K KEIV+ NPV VFSKTYCP+CV VK LL+KLGA+FKAVELD+E DGSE+QAAL +
Sbjct: 1   MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAE 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSAA 109
           +TGQRTVPNVFIG KHIGGCDAT AL+ +G L+PLL EAGAIAK S A
Sbjct: 61  WTGQRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTSTA 108

[Close]

BLAST of Clc09G20935 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-37
Identity = 74/102 (72.55%), Postives = 87/102 (85.29%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MA+ KTKE+V+SN V VFSKTYCPYC  VK+LL +LGA +K VELDTESDGSE+Q AL +
Sbjct: 1   MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAE 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAI 103
           +TGQRTVPNVFIGGKHIGGCD+T A + +G LVPLL EAGA+
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGAV 102

[Close]

BLAST of Clc09G20935 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-36
Identity = 75/103 (72.82%), Postives = 89/103 (86.41%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MAL K KE VAS PV V+SK+YCP+CV+VK+L  +LGA+FKA+ELD ESDGSE+Q+AL +
Sbjct: 1   MALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAE 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIA 104
           +TGQRTVPNVFI GKHIGGCD T+ALN +G LVPLL EAGAIA
Sbjct: 61  WTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGAIA 103

[Close]

BLAST of Clc09G20935 vs. ExPASy Swiss-Prot
Match: Q9FNE2 (Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-36
Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MA++K KEIV S  V VFSKTYCPYCV+VK LL +LGA FKAVELDTESDGS++Q+ L +
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQRTVPNVFIGG HIGGCDAT  L+  G LVPLL EAGAIA  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Clc09G20935 vs. ExPASy Swiss-Prot
Match: Q6K953 (Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-36
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MAL+K KEIVAS+PV VFSKTYCP+C +VKRLL +L AS+KAVELD ESDGSE+Q+AL  
Sbjct: 27  MALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALAD 86

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVS 107
           +TGQRTVP VFI GKHIGGCD T+A++  G LVPLL EAGAIA  S
Sbjct: 87  WTGQRTVPCVFIKGKHIGGCDDTMAMHKGGNLVPLLTEAGAIATPS 132

[Close]

BLAST of Clc09G20935 vs. ExPASy TrEMBL
Match: A0A6J1K114 (glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-44
Identity = 96/107 (89.72%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK K+IVASNPV VFSKT CPYCVQVKRLLT LGA+FKAVELDTESDGSE+QAAL Q
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQRTVPNVFIGGKHIGGCDATVALN KGGLVPLLAEAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Clc09G20935 vs. ExPASy TrEMBL
Match: A0A5A7T277 (Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G001730 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.2e-44
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK KEIVASNPVTVFSK+YCP+CVQVKRLLTKLG SFKA+ELDTESDG EVQAAL Q
Sbjct: 1   MALEKAKEIVASNPVTVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREVQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           FTGQRTVPNVFIGGKHIGGCD T+ALN  G LVPLLAEAGAIAKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Clc09G20935 vs. ExPASy TrEMBL
Match: A0A1S3C8S5 (glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103498089 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.2e-44
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK KEIVASNPVTVFSK+YCP+CVQVKRLLTKLG SFKA+ELDTESDG EVQAAL Q
Sbjct: 1   MALEKAKEIVASNPVTVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREVQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           FTGQRTVPNVFIGGKHIGGCD T+ALN  G LVPLLAEAGAIAKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Clc09G20935 vs. ExPASy TrEMBL
Match: A0A6J1FDX0 (glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK K+IV SNPV VFSKT CPYCVQVKRLLT LG +FKAVELDTESDGSE+QAAL Q
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGVNFKAVELDTESDGSEIQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQRTVPNVFIGGKHIGGCDATVALN KGGLVPLLAEAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Clc09G20935 vs. ExPASy TrEMBL
Match: A0A0A0KR45 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 92/107 (85.98%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MALEK KEIVASNPV VFSK+YCP+CVQVKRLLTKLG SFKA+ELDTESDG E+QAAL Q
Sbjct: 1   MALEKAKEIVASNPVAVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREIQAALAQ 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           FTGQRTVPNVFIGGKHIGGCD T+ALN  G LVPLLAEAGAIAKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Clc09G20935 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 152.9 bits (385), Expect = 1.5e-37
Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           MA++K KEIV S  V VFSKTYCPYCV+VK LL +LGA FKAVELDTESDGS++Q+ L +
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQRTVPNVFIGG HIGGCDAT  L+  G LVPLL EAGAIA  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Clc09G20935 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 4.1e-32
Identity = 67/107 (62.62%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 1   MALEKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQ 60
           + + K KEIV++ PV VFSKTYC YC +VK+LLT+LGA+FK +ELD  SDG E+Q+AL +
Sbjct: 17  VVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSE 76

Query: 61  FTGQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           +TGQ TVPNVFI G HIGGCD  +  N +G LVPLL EAGAIA  S+
Sbjct: 77  WTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIADNSS 123

[Close]

BLAST of Clc09G20935 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 134.0 bits (336), Expect = 7.0e-32
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 17  VFSKTYCPYCVQVKRLLTKLGASFKAVELDTESDGSEVQAALFQFTGQRTVPNVFIGGKH 76
           + SKTYCPYCV+VK LL +LGA FKAVELDTESDGS++Q+ L ++TGQRTVPNVFIGG H
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNH 101

Query: 77  IGGCDATVALNGKGGLVPLLAEAGAIAKVSA 108
           IGGCDAT  L+  G LVPLL EAGAIA  +A
Sbjct: 102 IGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 132

[Close]

BLAST of Clc09G20935 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-21
Identity = 54/97 (55.67%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 4   EKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELD-TESDGSEVQAALFQFT 63
           E  K  VA NPV V+SKT+C Y  QVK L   L      VELD   S+GS++Q  L + T
Sbjct: 76  ETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGSEGSQLQNVLEKIT 135

Query: 64  GQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEA 100
           GQ TVPNVFIGGKHIGGC  T+ L+ KG L  +LAEA
Sbjct: 136 GQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEA 172

[Close]

BLAST of Clc09G20935 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 94.4 bits (233), Expect = 6.2e-20
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 4   EKTKEIVASNPVTVFSKTYCPYCVQVKRLLTKLGASFKAVELD-TESDGSEVQAALFQFT 63
           E  ++ V  N V ++SKT+C YC +VK L  +LG     VELD     G ++Q  L + T
Sbjct: 71  ESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLT 130

Query: 64  GQRTVPNVFIGGKHIGGCDATVALNGKGGLVPLLAEA 100
           GQ TVPNVF+ GKHIGGC  TV LN KG L  +LAEA
Sbjct: 131 GQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEA 167

The following BLAST results are available for this feature:

BLAST of Clc09G20935 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889541.1	7.2e-47	93.46	glutaredoxin-like [Benincasa hispida]	[more]
XP_022993774.1	3.4e-44	89.72	glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbi...	[more]
KAG7016200.1	9.8e-44	88.79	hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578661.1	9.8e-44	88.79	Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita...	[more]
XP_008458784.1	1.3e-43	87.85	PREDICTED: glutaredoxin-C6 [Cucumis melo] >KAA0037552.1 glutaredoxin-C6 [Cucumis...	[more]

BLAST of Clc09G20935 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR41	2.0e-39	75.00	Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P55143	1.9e-37	72.55	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P55142	1.2e-36	72.82	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]
Q9FNE2	2.1e-36	71.96	Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1	[more]
Q6K953	2.7e-36	72.64	Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4...	[more]

BLAST of Clc09G20935 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K114	1.6e-44	89.72	glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1	[more]
A0A5A7T277	6.2e-44	87.85	Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G0017...	[more]
A0A1S3C8S5	6.2e-44	87.85	glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103498089 PE=3 SV=1	[more]
A0A6J1FDX0	1.4e-43	87.85	glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1	[more]
A0A0A0KR45	3.1e-43	85.98	Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1	[more]

BLAST of Clc09G20935 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40370.1	1.5e-37	71.96	Glutaredoxin family protein	[more]
AT5G63030.1	4.1e-32	62.62	Thioredoxin superfamily protein	[more]
AT5G40370.2	7.0e-32	72.53	Glutaredoxin family protein	[more]
AT2G20270.1	4.3e-21	55.67	Thioredoxin superfamily protein	[more]
AT4G28730.1	6.2e-20	50.52	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 15..33 score: 51.1 coord: 60..73 score: 61.9 coord: 74..87 score: 46.13
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 15..94 e-value: 2.7E-29 score: 99.2
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..108 e-value: 1.5E-40 score: 139.4
None	No IPR available	PANTHER	PTHR45694:SF14	GLUTAREDOXIN-C2	coord: 1..106
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 1..106
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 3..103 score: 26.219011
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 14..95 e-value: 3.39651E-46 score: 141.523
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 15..77 e-value: 4.3E-22 score: 78.1
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 17..33
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G20935.1	Clc09G20935.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity