Clc03G13090 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G13090
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Thioredoxin
Location	ClcChr03: 22092899 .. 22095075 (-)
RNA-Seq Expression	Clc03G13090
Synteny	Clc03G13090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACTGTATTTTTTTAATATTGAGTTTGACTTTAATTAAAAAACTATCAGAGGAAGACAGTTTGTTTTCTTCTTCTTCTTCTTCTTTTAAATAATAATTAGTACTTGAAAACTGGGTTTAGTTTGATGTACAGCATTTTGATGTCACATCTCGGGCTGGACTAACTCACGCTTAGTAGCTGAAATTTCTGGGACAATATCAGGAAAAATTGTTTGAGGATGACAGAACTATGCGGTTCTCACATTGAATAATTTTTTCTAATATATCGTAGTTTTCGAAACAATATATAGTTGAGACATCTGCTAAATAAGTTCAAGGCAATTCGATAATGGGTATTCTAGCTACTATTTAGTCAAATTATTTTCGTACTTGGAATCAAGTCTATTTAAACTTCTTTTTCTAGTTCAACAAGTGGAGAAATTATTCAATTAAATTGCAATGTGGATGATAGCTTTTCACCGTTGGATGTAGAACTCAGTTGAATAATTTTGACAACAACTGGGGTTGGGGGATTCCGTCCTGTGGTCTCTTGATCCATGGCATATGCCGTTGAATGATGGTTAAGCTTGACAAGTCTATTTAAACTCATATCAAGCAATACAAAGCTATTTAATTGCTTGTTTTGTTTTCACTAATTTTTACATAGTTTTAGTGTAATGTTCTCTATTTTAGGGTATTTTGCTTCATCGGGCTGTAGCCAATTGGCGATGGTCCCTTTCTAATGGTGATTTGGTTGCTGATTAAGTCTGAAGTAGTTAATTGATGTGGGAGTTTTAGGAAAGAAAATTTGAAAGAATGAGAAACTGGTAAGCTAGAAGCACAAGACAACAGCTTGTTTATGATAGATATAACATATCTTACAAAAAAAACAAAACTAGATATATCATATAAGAAAAAGAAAAAAAAAATCGATTAACAAGCTTCATACCTCGACTTGGATACAGAATAAACTTTTGAATCATATAATGTAACATAGCGTAACTGAAATGTGCTTTGCCTCTATGTTGTGACCTTTTGGATCTTTCTTTTCTTTCCTTTAGCTTTAATTCCATAATAGGTAAGTTTACTCACTAAAAAAGAAACCCTTTGCCTTTGACGGCCTTGATTTTCTGGCAGAGTTTTTACTTTTCCCTTATTGCTTCTTGTAATAACCTGACCCTCATGGCTGTGGTGATTAATTTTTGTTAGAAAGAAAACTTTTTCTTGTTTTGCTGTGCAATTTCAGACTCCTTGTGACATTAATCATTTGTGAACATTTTAGATTCATTATTTATTGTCTCTGTTTTTGGACTCCCAAGCTTAATATCTTAATGTTCCTTTATTCATCCTTACATGGTACCACTAAAGGTGTGGACCATGCAAAGTGATGGCCCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGGTTCTTTTCATGATCCCTACTTTCTTGCTTGAACTTAGGAATGTATTTCCATAGTTCATATAGCAGCAGATCATATAAGAAAACTTGAATTCTCTTTATTTGACAGCCATTGGCAAAGGAACTTGGGATAAAAGTTGTGCCAACTTTCAAAATTCTAAAGGATAGCAAGGTTGTTAAAGAAGTAACTGGGGCAAAGTTTGATGATTTGGTTCATGCCATCGATGCTGTAAGATCCAGCTGAAAACTCTCCTCTCTTCTCTTCTTTGTAAATTCAAATAATATGATGCAAGGAAGAGCATCCAGGACAGTTATTTATTTTACTCTATTAATTTAATGATTTTGTGTACTGTTAAGTTTTAAGGAAGAAGCTGTTCAATATTCTTCTTGCTAAGATAGTGGGAAATGATTCTGTATATAGATGTTTGAGACATGGACATTTGAATATGGACAATGAACAGTTCCTACGTATTCCACAAATTATTTTGCTATAAACATTTGATGCATGCAGAGAGGATTTGAATGTTTTTATAATTGTTTTTGGGTATGGTTATGGTTATGGTTTTGGTTGGATTTTGGGTGATCTTTTGATTAGGTTCTAGTTGGTTTTTAGTGTGTTTGGGATGGTTTGTGAGAAGTACTTTTAAATAAAAGTCACTTTTCTGTATGCACTTTTGGAGGAATTACTAATTTAGATTGTGTTTAGAATGACTTCCAAGTAAATGTGTAG

mRNA sequence

ATGACACTGTGTGGACCATGCAAAGTGATGGCCCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTTGTGCCAACTTTCAAAATTCTAAAGGATAGCAAGGTTGTTAAAGAAGTAACTGGGGCAAAGTTTGATGATTTGGTTCATGCCATCGATGCTAATGACTTCCAAGTAAATGTGTAG

Coding sequence (CDS)

ATGACACTGTGTGGACCATGCAAAGTGATGGCCCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTTGTGCCAACTTTCAAAATTCTAAAGGATAGCAAGGTTGTTAAAGAAGTAACTGGGGCAAAGTTTGATGATTTGGTTCATGCCATCGATGCTAATGACTTCCAAGTAAATGTGTAG

Protein sequence

MTLCGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVTGAKFDDLVHAIDANDFQVNV

Homology

[Close]

BLAST of Clc03G13090 vs. NCBI nr
Match: XP_038878300.1 (thioredoxin F-type, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 148.3 bits (373), Expect = 3.0e-32
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD+KVVKEVT
Sbjct: 161 CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVT 220

Query: 64  GAKFDDLVHAID 76
           GAKFDDLVHAID
Sbjct: 221 GAKFDDLVHAID 232

[Close]

BLAST of Clc03G13090 vs. NCBI nr
Match: XP_022157062.1 (thioredoxin F-type, chloroplastic-like [Momordica charantia])

HSP 1 Score: 147.1 bits (370), Expect = 6.6e-32
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPC+VMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD+KVVKEVT
Sbjct: 104 CGPCRVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVT 163

Query: 64  GAKFDDLVHAIDA 77
           GAKFDDLVHAI+A
Sbjct: 164 GAKFDDLVHAIEA 176

[Close]

BLAST of Clc03G13090 vs. NCBI nr
Match: XP_008443649.1 (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 8.6e-32
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQ+LSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVT
Sbjct: 104 CGPCKVMAPKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVT 163

Query: 64  GAKFDDLVHAID 76
           GAKFDDLVHAID
Sbjct: 164 GAKFDDLVHAID 175

[Close]

BLAST of Clc03G13090 vs. NCBI nr
Match: XP_030971341.1 (thioredoxin F-type, chloroplastic-like isoform X2 [Quercus lobata])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQELS+KYLDVVFLKLDCNQ+NKPLAKELGIKVVPTFKILKDSKVVKEVT
Sbjct: 101 CGPCKVMAPKFQELSQKYLDVVFLKLDCNQENKPLAKELGIKVVPTFKILKDSKVVKEVT 160

Query: 64  GAKFDDLVHAIDA 77
           GAKFDDLV AIDA
Sbjct: 161 GAKFDDLVLAIDA 173

[Close]

BLAST of Clc03G13090 vs. NCBI nr
Match: XP_023520633.1 (thioredoxin F-type, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 7.3e-31
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQELSEKYLDV+FLKLDCNQDNKPLAKELGIKVVPTFKILK+  VVKEVT
Sbjct: 104 CGPCKVMAPKFQELSEKYLDVIFLKLDCNQDNKPLAKELGIKVVPTFKILKNKMVVKEVT 163

Query: 64  GAKFDDLVHAIDA 77
           GAK+DDLVHAIDA
Sbjct: 164 GAKYDDLVHAIDA 176

[Close]

BLAST of Clc03G13090 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-30
Identity = 63/72 (87.50%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKV+AP ++ELS+KYLDVVFLKLDCNQDNK LAKELGIKVVPTFKILKD+K+VKEVT
Sbjct: 106 CGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVT 165

Query: 64  GAKFDDLVHAID 76
           GAKFDDLV AID
Sbjct: 166 GAKFDDLVAAID 177

[Close]

BLAST of Clc03G13090 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.8e-30
Identity = 61/73 (83.56%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKV+APK++ELSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKD+KVVKEVT
Sbjct: 109 CGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVT 168

Query: 64  GAKFDDLVHAIDA 77
           GAK++DL+ AI+A
Sbjct: 169 GAKYEDLLAAIEA 181

[Close]

BLAST of Clc03G13090 vs. ExPASy Swiss-Prot
Match: Q8S091 (Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0913000 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-29
Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQE+SEK  DVVFLKLDCNQDNK LAKELGIKVVPTFKILKD KVVKEVT
Sbjct: 111 CGPCKVMAPKFQEMSEKDQDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVT 170

Query: 64  GAKFDDLVHAID 76
           GAK D+L+ AI+
Sbjct: 171 GAKLDELIQAIE 182

[Close]

BLAST of Clc03G13090 vs. ExPASy Swiss-Prot
Match: O81332 (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.4e-29
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPK+QEL+EK LDVVFLKLDCNQ+NKPLAKELGI+VVPTFKILK  K+V EVT
Sbjct: 115 CGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVT 174

Query: 64  GAKFDDLVHAIDA 77
           GAKFD LV AI+A
Sbjct: 175 GAKFDKLVAAIEA 187

[Close]

BLAST of Clc03G13090 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 7.1e-29
Identity = 60/72 (83.33%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKV+APK++ LSEKY DVVFLKLDCN DN+PLAKELGI+VVPTFKILKD+KVVKEVT
Sbjct: 99  CGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVT 158

Query: 64  GAKFDDLVHAID 76
           GAK+DDLV AI+
Sbjct: 159 GAKYDDLVAAIE 170

[Close]

BLAST of Clc03G13090 vs. ExPASy TrEMBL
Match: A0A6J1DTK2 (thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111023873 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.2e-32
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPC+VMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD+KVVKEVT
Sbjct: 104 CGPCRVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVT 163

Query: 64  GAKFDDLVHAIDA 77
           GAKFDDLVHAI+A
Sbjct: 164 GAKFDDLVHAIEA 176

[Close]

BLAST of Clc03G13090 vs. ExPASy TrEMBL
Match: A0A1S3B9B3 (thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.2e-32
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQ+LSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVT
Sbjct: 104 CGPCKVMAPKFQDLSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVT 163

Query: 64  GAKFDDLVHAID 76
           GAKFDDLVHAID
Sbjct: 164 GAKFDDLVHAID 175

[Close]

BLAST of Clc03G13090 vs. ExPASy TrEMBL
Match: A0A6J1IEI3 (thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472482 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-31
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQELSEKYLDV+FLKLDCNQDNKPLAKELGIKVVPTFKILK+  VVKEVT
Sbjct: 104 CGPCKVMAPKFQELSEKYLDVIFLKLDCNQDNKPLAKELGIKVVPTFKILKNKMVVKEVT 163

Query: 64  GAKFDDLVHAIDA 77
           GAK+DDLVHAIDA
Sbjct: 164 GAKYDDLVHAIDA 176

[Close]

BLAST of Clc03G13090 vs. ExPASy TrEMBL
Match: A0A0A0M340 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-31
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQ+LSEKYLDVVFLKLDCN DNKPLAKELGIKVVPTFKILKD KVVKEVT
Sbjct: 104 CGPCKVMAPKFQDLSEKYLDVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVT 163

Query: 64  GAKFDDLVHAIDA 77
           GAKFD+LVHAIDA
Sbjct: 164 GAKFDELVHAIDA 176

[Close]

BLAST of Clc03G13090 vs. ExPASy TrEMBL
Match: A0A6J1F675 (thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441192 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-31
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKVMAPKFQELSEKYLDV+FLKLDCNQDNKPLAKELGIKVVPTFKILK+  VVKEVT
Sbjct: 104 CGPCKVMAPKFQELSEKYLDVIFLKLDCNQDNKPLAKELGIKVVPTFKILKNKMVVKEVT 163

Query: 64  GAKFDDLVHAIDA 77
           GAK+DDLVHAIDA
Sbjct: 164 GAKYDDLVHAIDA 176

[Close]

BLAST of Clc03G13090 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 )

HSP 1 Score: 131.7 bits (330), Expect = 2.7e-31
Identity = 61/73 (83.56%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKV+APK++ELSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKD+KVVKEVT
Sbjct: 109 CGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVT 168

Query: 64  GAKFDDLVHAIDA 77
           GAK++DL+ AI+A
Sbjct: 169 GAKYEDLLAAIEA 181

[Close]

BLAST of Clc03G13090 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 )

HSP 1 Score: 127.5 bits (319), Expect = 5.0e-30
Identity = 60/72 (83.33%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPCKV+APK++ LSEKY DVVFLKLDCN DN+PLAKELGI+VVPTFKILKD+KVVKEVT
Sbjct: 99  CGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVT 158

Query: 64  GAKFDDLVHAID 76
           GAK+DDLV AI+
Sbjct: 159 GAKYDDLVAAIE 170

[Close]

BLAST of Clc03G13090 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-10
Identity = 30/71 (42.25%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPC+ +AP F +L++K  +V+FLK+D   + K +A +  I+ +PTF  LK+ K++ +V 
Sbjct: 40  CGPCRFIAPFFADLAKKLPNVLFLKVD-TDELKSVASDWAIQAMPTFMFLKEGKILDKVV 99

Query: 64  GAKFDDLVHAI 75
           GAK D+L   I
Sbjct: 100 GAKKDELQSTI 109

[Close]

BLAST of Clc03G13090 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 60.1 bits (144), Expect = 9.9e-10
Identity = 26/70 (37.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 2   TLCGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKE 61
           T C PC+ +AP F +L++K+LDVVF K+D ++ N  +A+E  ++ +PTF  +K+ ++ + 
Sbjct: 37  TWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELN-TVAEEFKVQAMPTFIFMKEGEIKET 96

Query: 62  VTGAKFDDLV 72
           V GA  ++++
Sbjct: 97  VVGAAKEEII 105

[Close]

BLAST of Clc03G13090 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 57.4 bits (137), Expect = 6.4e-09
Identity = 25/67 (37.31%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 4   CGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKVVKEVT 63
           CGPC+++ P    +++K+ DV F+KLD + +   +AKE  +  +PTF ++K  K ++ + 
Sbjct: 59  CGPCRMIEPAIHAMADKFNDVDFVKLDVD-ELPDVAKEFNVTAMPTFVLVKRGKEIERII 118

Query: 64  GAKFDDL 71
           GAK D+L
Sbjct: 119 GAKKDEL 124

The following BLAST results are available for this feature:

BLAST of Clc03G13090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878300.1	3.0e-32	98.61	thioredoxin F-type, chloroplastic-like [Benincasa hispida]	[more]
XP_022157062.1	6.6e-32	95.89	thioredoxin F-type, chloroplastic-like [Momordica charantia]	[more]
XP_008443649.1	8.6e-32	97.22	PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo]	[more]
XP_030971341.1	5.6e-31	95.89	thioredoxin F-type, chloroplastic-like isoform X2 [Quercus lobata]	[more]
XP_023520633.1	7.3e-31	93.15	thioredoxin F-type, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc03G13090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29450	1.3e-30	87.50	Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9XFH9	3.8e-30	83.56	Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 ...	[more]
Q8S091	2.4e-29	86.11	Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09...	[more]
O81332	5.4e-29	83.56	Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 ...	[more]
Q9XFH8	7.1e-29	83.33	Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 ...	[more]

BLAST of Clc03G13090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTK2	3.2e-32	95.89	thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3B9B3	4.2e-32	97.22	thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 P...	[more]
A0A6J1IEI3	3.5e-31	93.15	thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114724...	[more]
A0A0A0M340	3.5e-31	94.52	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650...	[more]
A0A6J1F675	3.5e-31	93.15	thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of Clc03G13090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16400.1	2.7e-31	83.56	thioredoxin F2	[more]
AT3G02730.1	5.0e-30	83.33	thioredoxin F-type 1	[more]
AT3G51030.1	1.2e-10	42.25	thioredoxin H-type 1	[more]
AT5G42980.1	9.9e-10	37.14	thioredoxin 3	[more]
AT5G39950.1	6.4e-09	37.31	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..78 e-value: 1.8E-23 score: 84.5
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 4..76
None	No IPR available	PANTHER	PTHR10438:SF382	THIOREDOXIN F2, CHLOROPLASTIC	coord: 4..76
None	No IPR available	CDD	cd02947	TRX_family	coord: 4..75 e-value: 1.6547E-20 score: 75.6724
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 3..75 e-value: 1.6E-17 score: 63.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..79 score: 8.815321
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G13090.1	Clc03G13090.1	mRNA