Cla97C11G207990 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C11G207990
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Ribosomal protein L18ae family
Location	Cla97Chr11: 1718668 .. 1720484 (-)
RNA-Seq Expression	Cla97C11G207990
Synteny	Cla97C11G207990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAAGTACCTTAATTCTTCTTATAACTTGGTTTGCTTATGATATCACTTATGGTTGGCATAATGTAAATTAAAAAAAAAAAATAGAAAAGAAAAGAAAAGAAAAGAAAAAAAGGCATGATTATGTATATTGGGTGCATTAGATGATTTATTCGTGGGGTTGTAGCGTGGTTCTAACTCAGTAATTTCTTTGATATTTAAGATCCTTTTAAGTGTCTTGGACATATGCCTATACTAACTGTTATACTTTCATTCCTTATTTATATGTTTAGTTAAAGAAGTGGTCACTTTCAGAATTTTAAGCTTGTTAATGTAGTGTCTATCCTATTATGATACTCTTCTAGCAGTCTTCATCAAACCAATAATACACATCGAGCTGCAAATATAGTTTCTACGAAATAGATGGAACAATTACTTGAGTTGTGAACATGTTTTCTGGATGTTACAGATGGAAAGATTGACCAGACGGTGCAACTGGTGAAGTCGGTTTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGGATTTGTTCAATATTCAAAGGTAAATCAGGAATAAATAGAAACATTTCTGACTGGGATTTTTCTGATAGATAAGTATATATTATTACCTTATATTGGTTGCTCAGGAATGAAATTAGTCGACCATTTTCAAAATGCCTTTATATTGCAATCATCAGTGACTTCTCTTCATTGAGGATGGAATTTCTGGAATCGATAGGGCTTTCATTTTTTACAGTTCCATTATGAGGGAAGGTTGTGAGATACTTAATAGCATCATTGCTACTCGTTTTTAACACTTCTTTGACGGTGCACGGTCTAGATGGTAGGATTTATCAGTCTGGTAGTCCATTTTATTTGTGCTCATCTATTGGAGATGTTGATTTTTCTTCTTGTTTTCTATTGGAGATGTTTTGGAGATGTTGATTGCTAGAGTCTTTTCCTTGTATATTCATTTATGCTCAAAATGGTTAATAATACACCTAGGCCAAGGAAAAGATGTTTCAGATCACATAAGGAGCAAGTACACACTTCTCAGGGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCGTGTTTCGGCTGTGGCATAGGATGGTTTTCGTGAGTATTATGAAACTTTGTCGTCTACAAACATTTCAGGGAATGTCTATCTTTGCTTACATCCTGTTTCGAGTTTCCTAATCTTCATTTTGTATCTTTGTCTGTCCTTCAGTTTCCTTCTTGGGTTTTTTTTCCCACTACTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCCCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCATCTGCCATTGCTGTAAGTGTTTCTCCCAGTTCCACTCCATAATAAAGAGATGAAAAGAGAAGAAACAAGCATAATTGACATCAATTTTTACGTATTCGCCTTCTATTATGAGTTGTTGATTGAATATGATTGAGTTTCTGAAGAAGCAAAAAATGGTGAAATGGTGCAGGCACTTGCATGTTCGATCATCTTGTTAGTCGTCGTAGCTTTTCTCCTATGATAGCCCGTCCATCTCCACACTTGCAACTGTATTCTTAATCTTTTGCCCATTCAGCCTTGCCAATGCAGTTTCAATCTGAACAGCCCTGCTCGACTTTGGTGTTTTCTGCTAGTTTTCTTCGCAAAAAGAATGCAAATGTTTATAACCATATATACATATATTTGCCACCTCTTTCAGAAGAGAGTTGTCGCATTTGTAATACACAAAGAATACGTAATACATAATTTTAGATCCCTCGATACTATAATCCAAAGTTTAGTT

mRNA sequence

ATGGATCCAAGTACCTTAATTCTTCTTATAACTTGGTTTGCTTATGATATCACTTATGATGGAAAGATTGACCAGACGGTGCAACTGGTGAAGTCGGTTTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGGATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGTTTCAGATCACATAAGGAGCAAGTACACACTTCTCAGGGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCGTGTTTCGGCTGTGGCATAGGATGGTTTTCTTTCCTTCTTGGGTTTTTTTTCCCACTACTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCCCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCATCTGCCATTGCTGTAAGTGTTTCTCCCAGCACTTGCATGTTCGATCATCTTGTTAGTCGTCGTAGCTTTTCTCCTATGATAGCCCGTCCATCTCCACACTTGCAACTGTATTCTTAATCTTTTGCCCATTCAGCCTTGCCAATGCAGTTTCAATCTGAACAGCCCTGCTCGACTTTGGTGTTTTCTGCTAGTTTTCTTCGCAAAAAGAATGCAAATGTTTATAACCATATATACATATATTTGCCACCTCTTTCAGAAGAGAGTTGTCGCATTTGTAATACACAAAGAATACGTAATACATAATTTTAGATCCCTCGATACTATAATCCAAAGTTTAGTT

Coding sequence (CDS)

ATGGATCCAAGTACCTTAATTCTTCTTATAACTTGGTTTGCTTATGATATCACTTATGATGGAAAGATTGACCAGACGGTGCAACTGGTGAAGTCGGTTTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGGATTTGTTCAATATTCAAAGGCCAAGGAAAAGATGTTTCAGATCACATAAGGAGCAAGTACACACTTCTCAGGGATGTAGAGGATTCTCAAGTAGGGCTATATGACAAACCTCTCCCGTGTTTCGGCTGTGGCATAGGATGGTTTTCTTTCCTTCTTGGGTTTTTTTTCCCACTACTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCCCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCATCTGCCATTGCTGTAAGTGTTTCTCCCAGCACTTGCATGTTCGATCATCTTGTTAGTCGTCGTAGCTTTTCTCCTATGATAGCCCGTCCATCTCCACACTTGCAACTGTATTCTTAA

Protein sequence

MDPSTLILLITWFAYDITYDGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAVSVSPSTCMFDHLVSRRSFSPMIARPSPHLQLYS

Homology

[Close]

BLAST of Cla97C11G207990 vs. NCBI nr
Match: XP_022154699.1 (uncharacterized protein LOC111021894 isoform X1 [Momordica charantia])

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-60
Identity = 118/150 (78.67%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           D +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKD SDH+RSKYTLLRDVEDSQVGL
Sbjct: 25  DARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 84

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAVSV--S 139
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIA  +   
Sbjct: 85  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAQEIVNG 144

Query: 140 PSTCMFDHLVSRRSFSPMIARPSPHLQLYS 168
             +CMF HLVSR S S +IA P P L+L+S
Sbjct: 145 AGSCMFGHLVSRCSCSTVIASP-PRLKLHS 173

[Close]

BLAST of Cla97C11G207990 vs. NCBI nr
Match: XP_022154700.1 (uncharacterized protein LOC111021894 isoform X2 [Momordica charantia])

HSP 1 Score: 241.5 bits (615), Expect = 5.2e-60
Identity = 117/150 (78.00%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           + +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKD SDH+RSKYTLLRDVEDSQVGL
Sbjct: 4   NARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 63

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAVSV--S 139
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIA  +   
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAQEIVNG 123

Query: 140 PSTCMFDHLVSRRSFSPMIARPSPHLQLYS 168
             +CMF HLVSR S S +IA P P L+L+S
Sbjct: 124 AGSCMFGHLVSRCSCSTVIASP-PRLKLHS 152

[Close]

BLAST of Cla97C11G207990 vs. NCBI nr
Match: XP_038889607.1 (uncharacterized protein LOC120079478 [Benincasa hispida])

HSP 1 Score: 235.3 bits (599), Expect = 3.7e-58
Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           +GKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKD SDHIRSKYTLLRDVEDSQVGL
Sbjct: 4   NGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDASDHIRSKYTLLRDVEDSQVGL 63

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 134
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 117

[Close]

BLAST of Cla97C11G207990 vs. NCBI nr
Match: XP_008459564.1 (PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >KAA0061479.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa] >TYK10795.1 60S ribosomal protein L18a-1 [Cucumis melo var. makuwa])

HSP 1 Score: 232.3 bits (591), Expect = 3.1e-57
Identity = 109/114 (95.61%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           +GK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKD  DHIRSKYTLLRDVEDSQVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQVGL 63

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 134
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 117

[Close]

BLAST of Cla97C11G207990 vs. NCBI nr
Match: XP_004141063.1 (uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hypothetical protein Csa_019181 [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 4.1e-57
Identity = 109/114 (95.61%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           +GK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKD  DHIRSKYTLLRDVED+QVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGL 63

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 134
           YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 117

[Close]

BLAST of Cla97C11G207990 vs. ExPASy TrEMBL
Match: A0A6J1DMX6 (uncharacterized protein LOC111021894 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021894 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.6e-61
Identity = 118/150 (78.67%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           D +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKD SDH+RSKYTLLRDVEDSQVGL
Sbjct: 25  DARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 84

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAVSV--S 139
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIA  +   
Sbjct: 85  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAQEIVNG 144

Query: 140 PSTCMFDHLVSRRSFSPMIARPSPHLQLYS 168
             +CMF HLVSR S S +IA P P L+L+S
Sbjct: 145 AGSCMFGHLVSRCSCSTVIASP-PRLKLHS 173

[Close]

BLAST of Cla97C11G207990 vs. ExPASy TrEMBL
Match: A0A6J1DKD4 (uncharacterized protein LOC111021894 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021894 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.5e-60
Identity = 117/150 (78.00%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           + +  +T QLVKSVSDKHLDLLRPSAR CSIF+GQGKD SDH+RSKYTLLRDVEDSQVGL
Sbjct: 4   NARTGETFQLVKSVSDKHLDLLRPSARFCSIFRGQGKDASDHVRSKYTLLRDVEDSQVGL 63

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAVSV--S 139
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYAT+LYFWN RRDPRERAGLAASAIA  +   
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLVWYYATVLYFWNVRRDPRERAGLAASAIAQEIVNG 123

Query: 140 PSTCMFDHLVSRRSFSPMIARPSPHLQLYS 168
             +CMF HLVSR S S +IA P P L+L+S
Sbjct: 124 AGSCMFGHLVSRCSCSTVIASP-PRLKLHS 152

[Close]

BLAST of Cla97C11G207990 vs. ExPASy TrEMBL
Match: A0A1S3CAZ9 (uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 109/114 (95.61%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           +GK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKD  DHIRSKYTLLRDVEDSQVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQVGL 63

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 134
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 117

[Close]

BLAST of Cla97C11G207990 vs. ExPASy TrEMBL
Match: A0A5D3CGZ6 (60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001100 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 109/114 (95.61%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           +GK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKD  DHIRSKYTLLRDVEDSQVGL
Sbjct: 4   NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDSQVGL 63

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 134
           YDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 64  YDKPLPCFGCGIGWFSFLLGFFFPLMWYYATILYFWNARRDPRERAGLAASAIA 117

[Close]

BLAST of Cla97C11G207990 vs. ExPASy TrEMBL
Match: A0A0A0LKM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.0e-57
Identity = 109/114 (95.61%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 20  DGKIDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGL 79
           +GK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKD  DHIRSKYTLLRDVED+QVGL
Sbjct: 65  NGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGL 124

Query: 80  YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 134
           YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA
Sbjct: 125 YDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIA 178

[Close]

BLAST of Cla97C11G207990 vs. TAIR 10
Match: AT4G26060.1 (Ribosomal protein L18ae family )

HSP 1 Score: 139.0 bits (349), Expect = 3.4e-33
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 24  DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGLYDKP 83
           D + +LVKSV+DKH  L+RP A+  S      KD     + +YTL++DV++ + G+YDKP
Sbjct: 10  DGSAELVKSVADKHAGLVRPVAKYYSAV----KDAMVCGKGRYTLVKDVDEVENGVYDKP 69

Query: 84  LPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAI 133
           LPCFGCGIGWFSFLLGF FP LWYYAT+LYF N  R+DPRERAGLAASAI
Sbjct: 70  LPCFGCGIGWFSFLLGFVFPFLWYYATLLYFGNYYRKDPRERAGLAASAI 115

[Close]

BLAST of Cla97C11G207990 vs. TAIR 10
Match: AT5G57060.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-negative bacterium, cytolysis; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Channel forming colicin, C-terminal cytotoxic (InterPro:IPR000293); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 5.4e-31
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 28  QLVKSVSDKHLDLLRPSARICSIFKGQGKDVSDHIRSKYTLLRDVEDSQVGLYDKPLPCF 87
           +LVK ++D+H  L++ ++R  S      KD     + +YTL++DV+D + G YDKPLPCF
Sbjct: 15  ELVKFIADRHAKLMKQASRHYSAI----KDAMARGKKRYTLVKDVDDMETGAYDKPLPCF 74

Query: 88  GCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAI 133
           GCGIGWFSFLLGF FP LWYYA  LYF N  R+DPRERAGLAASAI
Sbjct: 75  GCGIGWFSFLLGFMFPFLWYYAAFLYFGNYYRKDPRERAGLAASAI 116

[Close]

BLAST of Cla97C11G207990 vs. TAIR 10
Match: AT5G57060.2 (BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-27
Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 0


Query: 56  KDVSDHIRSKYTLLRDVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFW 115
           KD     + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP LWYYA  LYF 
Sbjct: 12  KDAMARGKKRYTLVKDVDDMETGAYDKPLPCFGCGIGWFSFLLGFMFPFLWYYAAFLYFG 71

Query: 116 N-ARRDPRERAGLAASAI 133
           N  R+DPRERAGLAASAI
Sbjct: 72  NYYRKDPRERAGLAASAI 89

[Close]

BLAST of Cla97C11G207990 vs. TAIR 10
Match: AT1G54217.2 (Ribosomal protein L18ae family )

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-21
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 57  DVSDHIRSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFW 116
           D+ +  + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  
Sbjct: 5   DLEEQKKGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLI 64

Query: 117 N-ARRDPRERAGLAASAIAVSV 137
           +   RDPRER+GLAASAIA  +
Sbjct: 65  SYYHRDPRERSGLAASAIAALI 86

[Close]

BLAST of Cla97C11G207990 vs. TAIR 10
Match: AT1G54217.1 (Ribosomal protein L18ae family )

HSP 1 Score: 99.0 bits (245), Expect = 3.9e-21
Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 57  DVSDHIRSKYTLLR-DVEDSQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFW 116
           ++ +  + KY L+R D EDS++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  
Sbjct: 4   NLEEQKKGKYVLIRDDAEDSELGQFYKPLPCFGFGIGWFSFLLGFVFPFAWYVATFLYLI 63

Query: 117 N-ARRDPRERAGLAASAIAVSV 137
           +   RDPRER+GLAASAIA  +
Sbjct: 64  SYYHRDPRERSGLAASAIAALI 85

The following BLAST results are available for this feature:

BLAST of Cla97C11G207990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154699.1	1.4e-60	78.67	uncharacterized protein LOC111021894 isoform X1 [Momordica charantia]	[more]
XP_022154700.1	5.2e-60	78.00	uncharacterized protein LOC111021894 isoform X2 [Momordica charantia]	[more]
XP_038889607.1	3.7e-58	97.37	uncharacterized protein LOC120079478 [Benincasa hispida]	[more]
XP_008459564.1	3.1e-57	95.61	PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo] >XP_008459572.1 P...	[more]
XP_004141063.1	4.1e-57	95.61	uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus] >KGN60545.2 hy...	[more]

BLAST of Cla97C11G207990 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C11G207990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMX6	6.6e-61	78.67	uncharacterized protein LOC111021894 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DKD4	2.5e-60	78.00	uncharacterized protein LOC111021894 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3CAZ9	1.5e-57	95.61	uncharacterized protein LOC103498658 OS=Cucumis melo OX=3656 GN=LOC103498658 PE=...	[more]
A0A5D3CGZ6	1.5e-57	95.61	60S ribosomal protein L18a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LKM2	2.0e-57	95.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000300 PE=4 SV=1	[more]

BLAST of Cla97C11G207990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26060.1	3.4e-33	62.73	Ribosomal protein L18ae family	[more]
AT5G57060.1	5.4e-31	59.43	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to Gram-...	[more]
AT5G57060.2	2.1e-27	70.51	BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR...	[more]
AT1G54217.2	1.0e-21	60.98	Ribosomal protein L18ae family	[more]
AT1G54217.1	3.9e-21	59.76	Ribosomal protein L18ae family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46666:SF7	SUBFAMILY NOT NAMED	coord: 26..135
None	No IPR available	PANTHER	PTHR46666	60S RIBOSOMAL L18A-LIKE PROTEIN	coord: 26..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G207990.2	Cla97C11G207990.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane