ClCG11G003746 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTTCGTTTTGCAAAAATTGTAAATGCTGTGCATAATCTAGGACTTTCTTCTCTGGCAACAAACCAAGAATCATCAATTGTCCGCAAAGGCTATTGTGCTGTTTATGTTGGAGAGAGCCAAAGGAAACGGTTTGTGATTCCAATAGCTTACTTGAATCAGCCGTTCTTTAAAGATTTGCTCAGTCGAGCTGAAGAAGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGAGGATACATTCATCGATCTCATCTCTCATTTGCATTAG ATGGGTTTTCGTTTTGCAAAAATTGTAAATGCTGTGCATAATCTAGGACTTTCTTCTCTGGCAACAAACCAAGAATCATCAATTGTCCGCAAAGGCTATTGTGCTGTTTATGTTGGAGAGAGCCAAAGGAAACGGTTTGTGATTCCAATAGCTTACTTGAATCAGCCGTTCTTTAAAGATTTGCTCAGTCGAGCTGAAGAAGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGAGGATACATTCATCGATCTCATCTCTCATTTGCATTAG ATGGGTTTTCGTTTTGCAAAAATTGTAAATGCTGTGCATAATCTAGGACTTTCTTCTCTGGCAACAAACCAAGAATCATCAATTGTCCGCAAAGGCTATTGTGCTGTTTATGTTGGAGAGAGCCAAAGGAAACGGTTTGTGATTCCAATAGCTTACTTGAATCAGCCGTTCTTTAAAGATTTGCTCAGTCGAGCTGAAGAAGAATTTGGTTACAATCACCCCATGGGAGGTCTCACCATTCCCTGCAGTGAGGATACATTCATCGATCTCATCTCTCATTTGCATTAG MGFRFAKIVNAVHNLGLSSLATNQESSIVRKGYCAVYVGESQRKRFVIPIAYLNQPFFKDLLSRAEEEFGYNHPMGGLTIPCSEDTFIDLISHLH Homology
BLAST of ClCG11G003746 vs. NCBI nr
Match: KAA0045666.1 (auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99617.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 181.8 bits (460), Expect = 2.8e-42 Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of ClCG11G003746 vs. NCBI nr
Match: KGN61867.1 (hypothetical protein Csa_005975 [Cucumis sativus]) HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42 Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of ClCG11G003746 vs. NCBI nr
Match: KAG6605033.1 (hypothetical protein SDJN03_02350, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168.7 bits (426), Expect = 2.4e-38 Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of ClCG11G003746 vs. NCBI nr
Match: XP_038902470.1 (auxin-induced protein 15A-like [Benincasa hispida]) HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36 Identity = 74/95 (77.89%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of ClCG11G003746 vs. NCBI nr
Match: XP_022146118.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.9e-23 Identity = 45/65 (69.23%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 6.7e-23 Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 8.7e-23 Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22 Identity = 45/68 (66.18%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22 Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy TrEMBL
Match: A0A5A7TU59 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001910 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42 Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy TrEMBL
Match: A0A0A0LM55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258630 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42 Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy TrEMBL
Match: A0A6J1CXQ4 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015414 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.1e-36 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy TrEMBL
Match: A0A5D3BN78 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001920 PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35 Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of ClCG11G003746 vs. ExPASy TrEMBL
Match: A0A1S3C683 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497507 PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35 Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of ClCG11G003746 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24 Identity = 45/65 (69.23%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of ClCG11G003746 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 108.2 bits (269), Expect = 3.6e-24 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 0
BLAST of ClCG11G003746 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 107.8 bits (268), Expect = 4.7e-24 Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of ClCG11G003746 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.9 bits (263), Expect = 1.8e-23 Identity = 45/68 (66.18%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of ClCG11G003746 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.1 bits (261), Expect = 3.1e-23 Identity = 45/67 (67.16%), Postives = 59/67 (88.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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