Chy9G164530 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATTATACCAGAGAAATGATGGATTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAAGGCGTCCTCGCTAAGATCCGTGTAATTTATTATTATTTATTATTTATTTTTTTAAATTTTGAATTTTAACTTGCTTTTTCCTTCAAATTTTGTTTCTTATGCCTTTTACAGATCTCTCATTCTTATTCTCTCTACTGTATTTCTTCGATTTTTTGGGGTTCTTGTGCTGCTGGTTGGTGACACTAAATGTGGTTGGTTAAAGCTAGGGTTTGGTTTCTACTTTTAGATTTACAAGGACGTAGGATGGAGGAGACTGAATCTTTGTTTTGTATCTTCCAGCGTCTTATTCTTAAGATATCTTTGGCATCGATCTGATGTTAGGGGTCTTTAGTGTTTGCTACGTTTGAAGGAATATTTGATAATGTTCAGCCACCTTTAAATTTTGTGCTCTTTCTTCAATTCTCACTGAGATTTCCTCCTCAATTGGCCTTTCCATAGAACATTGTTCTCCACTTTCTTTTCTTACTTCTTTTTCTTTTGGTTATATACCAGGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCACCAGCATTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTATAAATAATTTTCTTTTCTCTTGAATATTATCAAATGAAAAGTACTTACTTGAAGTGCTTTCTGTTGCCTTGTAGACAATTTAAGTTACAAAATTTAAGAAGTAAAATTTTCCTCTGAAGGCTGAACTAATTTAGTTTATATTTGTTATGCACTTCTGTTCTATGTTTTAAAAAGCATTGGACAACTAAAATCTCCTTTGTTAGGTTTTAGTTTTCTCTTAAGTCTTTTCATAATTACTAATTAGGTCTCATTGTAGTTGGTTGGAGCCCCTTTCTTGAGTTGGGTCCTTCTTGGGGCTTGATCCTTTTTGGTTAGGTTACCATTGTACCATACCCCCCTCCCCCAATGGAAGTTCGATTCCGTACGATTATCATTATCATCATCTAAGTAGCACAGACACTTTAGTTTGGCTAGTGTGTCTGTGTTGGACACGTGTTGGAAACTTGGACACTCCAAGACTTATTGAACACTTATCGGTCACCTAGGAAGCACAGATACCAACACTGACACAACGACATGCCATTTTTCAAAAAAGCAAGACATGACACGTCGGGGACATTCAATTTTTTAGTAAAAGAAATTAAATATATGTCATGCTTATAAACATATTACATAACAATAATTCCAATTAAAGACGTCAAAATAACAAGTTTAGAACCATAAAATAAAAAAAAAGATGATGTTAACTCTTCTTGGACAAGTTCATGTGACCGACAATTGGCGAGAGGGTTAGGGCAAAGAGTGTTGGTGGCCTGGTGGGGAGAATCGGAAAAGAGAAGGTGGAGTGTGTGAAGCTTTTCACTTAAAGAGAAAATTTTAAAAAACAAACCTAATAATTATTGCCATTGGGTCAGACTAATGGGCCGTTTCTTTGGGTTTTTTTCCCAGCCGTGTTGGAGCCATGTCTAAAAAAAAAAAAAAAAAAGAAATCGACACGCCAGCTGGCATGTCGCGTGTCCGACACCGATACTTGGCCATCTTAGGAGTGTTAGTGCTTCTTAGTCACTTGTCCGGACAACAAATGTAGTTAGATAGGCATAGAACACTTGTTGAGTAGACTAAAAAGACACATATATGACAATAATAATTAGTTTTGGGTGTGAAATACATAAAACTAAGTTTCTTAAACATACAAATGCGTCGACCCATTTACTTTCGAATTTTCTTTTGGTATGAAAATGATATATATTTTTCAAAATGCATATTTTGATAAACATGTCCTTGTCGTGTTGTGTCCTAGACTTTTAAAAAATGACGAGTTGTCGAGTCCATGTCGTGTCATATTCATGTCTCGTATTTGTATTTGTGTTTCTTATATTATGCGCCAATTCAACTTAAGTAATATATTCATCCACATTTTGGTATTTTGATTTCAGGGAGGCTGCTTACTGCTCTAATATGTGAATATTTAGATTGGGCTCAGCTAAACCACACTCTGAAAGTTTATCTCCCGGAGTGCAATATGGTAATCAAGTACATTGTCCCTTTATGTGTACCAAGTTCTCCAACACCCCCCAACCTTCTCAGAAAAAAAGAGAGAGAAGATAGGACCCAAAACCCTTATATATGTAGGGAGAGAGAGAGAGAATAAAAGGATATAAAAAGTTGTATGACCTGACGTCTAATGTCTTGTAATTTTGCAGCAAAAAGATTCTTGGAAATCTGAATTGAAGGAATTTAGTAGTAAAAACGGATATGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTAGAGGGATTCTTGAAGTTTGAGGTTGGTTGGATCTCATGGTAGACTTACGTTACGATTGATTTATGTTAAATTTGAATTGTTCATGGTGCATATTTCCTTACTATTACATCAGCATTTATTGTTATTGTTAATTGTTATTATTTTGATTGTATAATAGGTATGTCGGCCTTTTTGTTTTAGGTTGCCTTAGTATCTATTTTTAGACTGCCATTTGACTTGTTTTCAGTTGACAGATGTGAGGTTGCAAGATCTCGATTTTCTTAAAAAATTAATTATTCTATTTGACAGAGTAACTTCTACTGTGATTTAAATGGTGTTGCAACTCTTAAACTGTGGATGTACTAATCTAACTGTCTGTTTTTGTTTTTGTTTTATGATGGTTTGTCCTCATCAATATAGCCACTAGCTTTATTAATTTACGGGATTTCTTACAAAATACCCAGGTTTTCGTAATGTTATCTTTCTCAAATACCACACTACTGTTCACTGTTCTACGGCAAAAAATGTTACGTGTATACAGTGTTTTGAAAAGCCCTCTTGGTGCGCCTAGGATCAAGGCACAGGTTTAGTGCCTTGCCTTGGAAAGGAGAGGCTCACAAAATAAGGCACGGCGCGCACCTTTTGTGAAGCCCCAAGGCTTAAAAAGCCCTGAGCCTTGGGGCTTTTTACTTTTAAAAATCGTAATAGTTAGGGGTTTTCCTTCCTTATCAACTAAAAGAATCAAGTTTTCTAAGCCTAAGTGCCAAATTTCTTGTGTTTAGTATTCTTTTCCATATTTCCACTCCAACTACCCTCTCTTTTAATGTAGTATTTTCATATGTAGTGCACCTCACAAAAAAAGGCCACACCTCACTAAGGCTTCAGAGGGCGCCTTAGTGAGTCTTGGGCATTTAAAAACACTGCATGTCTGCTTTCCCTTTCTACTGGGTATCACAAGTCAATAAGGAGAGAATCAATTAATACGTTAGACAAATTTTTGTATCTTTTTTTTTGCCTCTGGTACCTTAACCGTGACCTTCAAATTTCTATTAGTTTTTTATTTGTTTTTTTCTGGCAATTTCTTGATCTTTTTGTTCATTTCTTAAAAAAAAAAACAGAATTTATCTCAAGCAAGGGGTCCCGGAAGAAGAATAACCACTTCAGAATCTGATTCAATGTCTAGTCACGATTCTCGAAACAGTAGGAGACCTTCGTCATCTGTTGCAGGGGGTTTACCTCCACTAGGAAGGTAAACATATACCTGAATGTACCTTACCTACTTGTTGCTACTTTTCTTTTTGTTATCCCTAATTTTGTTGTATATTTATTTCAGGCCCAGTGCTGGTCCACAGGCATCTGGTAAGTCATGGCATGGATTTACTTCTTATATGCTTATCTACTTCCTCTTCTCTGTTCACGTGATGATTTAGGCTTTCAGATAGGAGGGTAGGGTCTTCGATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATATGATGGCAATGAGCTTCCCGAAGATGTAATGAGAACCTCAGCTGCACTGGAAAATCTGCAACTGGATCGAAAAGCTAGAAACCTAACATCATCTTGGCGGTATGTTTTGATTTCGAAAAGTTGCCTTCTATTGTGCTTTCTCTTTCTGAAGAAAACTATGACTGTTTAATTGTGTGCATTTTGTGGTTCTTTTCCTTTCTTCAAAAATATTTAAAATATCACTGCGTATTTGATTGAAACACAATGCACAACCTTGAATGGCAATTGAAGGATTTACAAGGAGTTTAGGACCAACTATACACAAACCTAGGATTCCAGGGACTAAATTTGTAATTTAACCAAAAAGAAGATTTACCTAGAAGACCCAGGGAAATTGCAAAAGAATAGCACATCAAAGTTTTCATCTAATAAAATTAGTCTCTTTTGAAAACTCATTTAAATAGTTTTTCTCAGGCGAAATCGACCACCGAGGTTTAGTTAAAAAATTAACTTCTCTAACCTATTGATTGTTTTGGGCCTTATTGGTACATCTTGGTATAGATTATATCAAGATTCTTTAGTAAGTTTTTCTAGTATTATGCAATTGTTTCAATTTCGGTTATCTTTAACAAATATTATACCAAAATCTTACTTAAATTTTAAATCTTTTAGATGACTTCATTTTTTCAACAATTGATTTCCAGAAAAAGAAAAACACAATCCTTAGCTCAGCTTATTCTCCATTACCATTCAGATTGTTGAACTTGAAAACCCCTCTTATTTTTCTCTCTACAAAAAGATCAACTAACAAAATCTCCCCGTTGATAAATATTTGGTAAAGATAACTGGATTTGAATTTCTTTTTAATATTGTATTAGATCTGATATAGAATTTGGGAAGATATGAAAAACACTTACCAAGAAGTCCCAAAACACTTGATACCCTAAAAAAGGTTAATTTTTTTAACTAAATCTCGATGGCCCGTCTGAAGCAAGAGTTCAAACCCGCACAATCTTTCATCTCTGTACTAAGAAGAAAGCTGGATACACAAAAGAATAGAGAAGAAGTGGAGTTGGCTAGTTCTGTTATTATTGAATTGCGTCTAAGCCTAGCACCAAATCAAAAGAAGGTAAAGCGACCTAGGAGTTTTCTCCTTTGAAAAAGTATTTTATAAGAAGAAAGACACTAGTACCCCACCTTTGACTTCAAGGAACACATTGTTCCTCGGTCTTGACCAACACAAAAGGGAGCAAAAGAAAATTAAATCACATCTCTAAACAAACAACTCAAGTCCTCATTATAACCACCATGCATTTTTCCTTCAAAATTTTGTCCGTCTCAGTCTCATCTACCCTCCAGGGGTATTTGGAGCCAGGAATGGAGTTGTGAAGTCAATGGGGCCCATTGTGGAAGGAGTTGCTATAATGTTTTTTAGTCATAGGGCTCGAGAAGTCCTTAGACCAGACAAGGAGTCAAGTTCAGCCCTCCAAGGAATGTTGTCCTTGGACCAAACAAGTAGGGAAGCTTAACCCTTTAGTAGACCTTGAGGGCAAGGTGTGAAGTTGTAAAGTTGTTAGGCTTGTTAGGCTCATAGTGGGAGGAGTTAATACAACATAAAATTCACCTTTTTTTAGTCGTGAGCCCACAAATTCCTTTGGAGGAGTAAACAAGGAGTAGAGTTCCTCCCAACTATAACTCCTTGGGCCAAACATTCCCTAATTTACTGTCTCGCTTTTAAGTTATAATGCAGATAAACTTCAAATAACTTCTCTACCTTTCTGTTCTATAATCAAAATTATTGTGAACATGGTTGCAGACATGGGGGAGATGGTATGAATGAGGAGGATAGCAGAGGTGAACATATGTAA ATGGACGATTATACCAGAGAAATGATGGATTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAAGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCACCAGCATTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGGAGGCTGCTTACTGCTCTAATATGTGAATATTTAGATTGGGCTCAGCTAAACCACACTCTGAAAGTTTATCTCCCGGAGTGCAATATGCAAAAAGATTCTTGGAAATCTGAATTGAAGGAATTTAGTAGTAAAAACGGATATGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTAGAGGGATTCTTGAAGTTTGAGAATTTATCTCAAGCAAGGGGTCCCGGAAGAAGAATAACCACTTCAGAATCTGATTCAATGTCTAGTCACGATTCTCGAAACAGTAGGAGACCTTCGTCATCTGTTGCAGGGGGTTTACCTCCACTAGGAAGGCCCAGTGCTGGTCCACAGGCATCTGATAGGAGGGTAGGGTCTTCGATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATATGATGGCAATGAGCTTCCCGAAGATGTAATGAGAACCTCAGCTGCACTGGAAAATCTGCAACTGGATCGAAAAGCTAGAAACCTAACATCATCTTGGCGACATGGGGGAGATGGTATGAATGAGGAGGATAGCAGAGGTGAACATATGTAA ATGGACGATTATACCAGAGAAATGATGGATTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAAGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCACCAGCATTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGGAGGCTGCTTACTGCTCTAATATGTGAATATTTAGATTGGGCTCAGCTAAACCACACTCTGAAAGTTTATCTCCCGGAGTGCAATATGCAAAAAGATTCTTGGAAATCTGAATTGAAGGAATTTAGTAGTAAAAACGGATATGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTAGAGGGATTCTTGAAGTTTGAGAATTTATCTCAAGCAAGGGGTCCCGGAAGAAGAATAACCACTTCAGAATCTGATTCAATGTCTAGTCACGATTCTCGAAACAGTAGGAGACCTTCGTCATCTGTTGCAGGGGGTTTACCTCCACTAGGAAGGCCCAGTGCTGGTCCACAGGCATCTGATAGGAGGGTAGGGTCTTCGATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATATGATGGCAATGAGCTTCCCGAAGATGTAATGAGAACCTCAGCTGCACTGGAAAATCTGCAACTGGATCGAAAAGCTAGAAACCTAACATCATCTTGGCGACATGGGGGAGATGGTATGAATGAGGAGGATAGCAGAGGTGAACATATGTAA MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGSCNDRAKQLHASPSGRLLTALICEYLDWAQLNHTLKVYLPECNMQKDSWKSELKEFSSKNGYDLNRNGDSGPLLLDVLEGFLKFENLSQARGPGRRITTSESDSMSSHDSRNSRRPSSSVAGGLPPLGRPSAGPQASDRRVGSSMSGYRKDEYSWRYDGNELPEDVMRTSAALENLQLDRKARNLTSSWRHGGDGMNEEDSRGEHM* Homology
BLAST of Chy9G164530 vs. ExPASy Swiss-Prot
Match: Q9FQ25 (Protein TONNEAU 1a OS=Arabidopsis thaliana OX=3702 GN=TON1A PE=1 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.4e-99 Identity = 191/261 (73.18%), Postives = 216/261 (82.76%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy Swiss-Prot
Match: Q9FQ24 (Protein TONNEAU 1b OS=Arabidopsis thaliana OX=3702 GN=TON1B PE=1 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.5e-96 Identity = 188/259 (72.59%), Postives = 212/259 (81.85%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy Swiss-Prot
Match: O95684 (Centrosomal protein 43 OS=Homo sapiens OX=9606 GN=CEP43 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09 Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy Swiss-Prot
Match: Q66JX5 (Centrosomal protein 43 OS=Mus musculus OX=10090 GN=Cep43 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09 Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy Swiss-Prot
Match: Q4V7C1 (Centrosomal protein 43 OS=Rattus norvegicus OX=10116 GN=Cep43 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09 Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy TrEMBL
Match: A0A0A0KS40 (LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G503600 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 3.6e-146 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy TrEMBL
Match: A0A5D3C1P8 (Protein TONNEAU 1a-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002350 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.3e-145 Identity = 262/265 (98.87%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy TrEMBL
Match: A0A1S3CJH5 (protein TONNEAU 1a-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.3e-145 Identity = 262/265 (98.87%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy TrEMBL
Match: A0A1S3CL40 (protein TONNEAU 1b-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 7.9e-141 Identity = 258/265 (97.36%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of Chy9G164530 vs. ExPASy TrEMBL
Match: A0A6J1JMY8 (protein TONNEAU 1a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487297 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.4e-137 Identity = 248/265 (93.58%), Postives = 258/265 (97.36%), Query Frame = 0
BLAST of Chy9G164530 vs. NCBI nr
Match: XP_004149821.1 (protein TONNEAU 1a isoform X1 [Cucumis sativus] >KGN51247.1 hypothetical protein Csa_008384 [Cucumis sativus]) HSP 1 Score: 532 bits (1371), Expect = 1.01e-190 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of Chy9G164530 vs. NCBI nr
Match: XP_008463549.1 (PREDICTED: protein TONNEAU 1a-like isoform X1 [Cucumis melo]) HSP 1 Score: 528 bits (1361), Expect = 3.39e-189 Identity = 262/265 (98.87%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of Chy9G164530 vs. NCBI nr
Match: TYK05747.1 (protein TONNEAU 1a-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 528 bits (1361), Expect = 1.84e-188 Identity = 262/265 (98.87%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of Chy9G164530 vs. NCBI nr
Match: XP_038889099.1 (protein TONNEAU 1a-like isoform X1 [Benincasa hispida]) HSP 1 Score: 524 bits (1349), Expect = 2.29e-187 Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of Chy9G164530 vs. NCBI nr
Match: XP_011655337.1 (protein TONNEAU 1b isoform X2 [Cucumis sativus]) HSP 1 Score: 518 bits (1335), Expect = 2.69e-185 Identity = 261/265 (98.49%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of Chy9G164530 vs. TAIR 10
Match: AT3G55000.1 (tonneau family protein ) HSP 1 Score: 364.0 bits (933), Expect = 1.0e-100 Identity = 191/261 (73.18%), Postives = 216/261 (82.76%), Query Frame = 0
BLAST of Chy9G164530 vs. TAIR 10
Match: AT3G55005.1 (tonneau 1b (TON1b) ) HSP 1 Score: 353.2 bits (905), Expect = 1.8e-97 Identity = 188/259 (72.59%), Postives = 212/259 (81.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|