Chy4G071870 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G071870
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Retrovirus-related pol polyprotein from transposon tnt 1-94
Location	chrH04: 4372343 .. 4387393 (-)
RNA-Seq Expression	Chy4G071870
Synteny	Chy4G071870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGGAACCCATTCAGAAAGCTGGGAGAACTCCGACTTTTTGATGTTGAAGAATCGGAACAATGGGAGTGCGTTAGGAGAGAACAAATTCAAGAAAGGTATAATAAGCAAAGCAAAATGAGAAGAGCATCAGATTTTGCGGCTTACACTACGCGGTACGCAACTAGGTAAGCATCGATCACACCTCTCAATGTTGGCTAAAGTATATACCTATGATATATTAGTCTACATCTACATTGATAGTATATACAAAACCATACAAAGGGATCTAATAATATGTGTTTACCATATTGCCCTTCGATTTAAAAAATATATATTATACCGGTTAAAGATTAGTGGCTACCTAGTGCCTTCCATTATTTCGAGGAAAGCTTCGGTATTCTCTTGAATATACGTATCGGTACATTTTGAAGTATAATACAATAAAATGATGCCACGCGATTGGAATCCATTTTGTTTTATTTGAAGTTTAAATTATTGTTTTATTTTAATATCTCTATATTTCACAATGTTTATAAAACAAATACGGAGGTAATTATACAAAAAGAATAGTAATAAAAGGAAAACATATCATAGTTAATACATTCCTTTGATCGTAGTTTTCTAAAATCACCACGTCCACGACCTTGATTTCTTTTTCTAGGTTGTCTTCCTTGTCTTTTAATTTCAACTTTGACTCAAAAAGTTGTTCAATTGTCTGCTTGTCCTTCTTAAGAAGCTTCTCTTCATGGGCCTGTAAAGAATCCATAAGTTGGTCAATGAATATTGTACTCAAATCCTTTGATTCTTTAATAGCTACGACGATGAAATTGAATTTTTCATCTAATGCGCGAAGTATCGTTTCTACTACTTGCTCATCACTTATTGTCTCTTCATATCTTTTCATTCCATTTACTACTGCTAGCAATCTTAAAGTATAATCTGAAACTGATTTAGACTCCTACATATGCAGTGATTCAAAATCACCTCTCAATTTTTGAAGGTGAACCTTCTTGACTCGATCTACTCCTTTATACAAATTCTCCAAAATTTCCCATGCTTGATGTGTAGAAGTTGCTCTAGAAATTTTCTCAAAATTTGAATCATCAATGACTTGATGAATGATGGTGAAAGCCTTTTGATCTTTTTTCCTTGTACTTTGTAAAGTTTCTCATTGAGCTTAACACAAAGCTGCATCACTTTCTGGTTCTTCATAACCATTATTAACAATGTCCCAAACATCTTGTGAACCTAGTAAATCTTTCATTCAAATACACCAACTGCTATAATTTTCTTTCGTAAGTCAAGGTACTTGGAAGGGAACTAAAATTGTTGTTTTCCATTTGCAAAAACAATAATCACCATATAAAATATTTAAAGAAAATAAAAAAAAAAACCGATTGAAAGACTAACTCCTTTTGTGGGTACGTATTCTTCTTCCCACTTTGATAGAATACAATTCAACATACCAATCCTATTTATAAGATTGTCTAGATCCATAATTTCACATAACAATTAATTTTCTATTTAATTCATCAACATATCTAATTTAAACAATATTGCCAACTATTTATCAATTAATTGTATATAACTTTAATATGTCTTCATTTTATATGTAACTTATTTCAATTAATTAAAACAACTTTTAACTTTTAAACACAACTCTCCTCAAAATGTTTTCAAAATGAAATATAAAAAGTCATATGGTTATCTAATTCACCAACCATTTGACGAAAAAATAGTGATTCTAATTTAAAATTTTGGTTAAACATTCAACTATTTGAATAAAAAAAAAAAGAAAATCATAATTAAAAATGTGTGATAAACCAGCACAATTTTAGAACTAAAAATAACACACTGAATTGTTATCAAGCAATACATTAAAAATTTAAGTGTTTCTTTCATGCTAATTTACAGACTCGTCTTTTATTTTTTTAAATTAAATTTCTTCTCTTCTTTCCGAGTATGAAGGGATATTGCTTGTATGATATTGAAAAAGAGTTCTTTCTTTCTGGTGATGCTATCTTTCTTGAGTAGATCTATTCTTTTCATTTAAATTAAAATACTCCACAAGATCATGATCTCTAGTTGATTTGTTTCCTAATCTTATCTTGTCTACCATCAGTCATATTGTCTATACTATTTTGCATTCTAATTTGGCTACTATTCAGTGTGATGGACATAATGTTGTTGGAAGTAATTCTTCTTATTCCAGTCCAACAGCTAAAGTTGCTAGCAATGCCAACAAACATAGATCGTGTATCGTATGTTAAGAGTATTGATAACAAAGTTGTTTGGCTCTTCTGTAACAAATTTTGTTGAAGTTGAGGCTCTTCATCATTTCACTCGATCTTCCAAGCCTCCTTCATACTTGAAATATTTTCGTTGCAGCTTGTTACAATCACAACCTTTTTTCTCCAATATTTAAGTGTCATTTATAAAGATATTTGGATTATAACAAACTTCCTCCTTCATATAGAAATCTTTGTCTTGACAATTTTGTCAACTTTTGAACCTAATTTTTTTATCATCGGGATGCTCCATACGAGCATTGAGGTATTGTCATGAAAGATGAGTTGAAAGTTACAGAAACTCATGTCACTTAATCTATTGTAAAGTGAAGTTCAAGGCCAATGATACAATTTAGTTGCCAAGGGTTGTACTCAAGAGGAGGGTTTTGATTATGTTGATCAAACTTTTTTTTCATGTTGCGAAGCTTGTAACTGTTAAAAGACTCAAGTGTGACTTAATTAATATGGTTACTTCTTTGAATTGGACTTTAGTTCAGTTGGACGTGGATACTGCTTTTTTGCATGGTGATCTTGTTGAAGAAGTGTATATGGGTCTACCGGTAGGTTATAAACAAAATTGTGTGTTGTGTATTTAGGGTGCCAATCACTATAAATAGAGGGATGCCCAACACTTGTATCAAACCAACAAAAATTAGAGGTGTCTAAGTAGCCTCTTTCTTCAATTCTCTCATCCAAATATCCTACCTCCAAAAATTGCTTTCCAACCATAGGGATTTCTTCTAGGAAGGCTGAAGGAGGTGGGTGTTGAATTTCTTTTATGAAAGAAGTTGAAAGTTAAACTTAAAGACTATAGAATGTGAAAAAGTTTCGTTCCTTGTAAATAATTTGGTGAAATAATGAATAAATGTGGGAAGATGTGCTTACTACTGTGATTGTAGGCTTAAGGTTCTTTTGCTTAATTTAGGGAGGAGGCCGAGGCCAAGTAGGGTGAGTTCATTCTTAGTTATTGTTTCACTTTCCCATTTGTCTTTTCTTTTTCTTAGGATTTCATGAGAAATGCTGATTAGAGAGAGTGAGTCTGAAAATAAACTGAATCTGAGTTGCCTCCAAATATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTTTTTTTATTTGCTAGATATTGAGGATGTGTTTGAATTTCAAATAGATTTCATTTTTCTTTCTTTTGGAATTTGGTTTAATTTTTTATGTAATTAAAATTTTATTTCCAATGAAAAAGATTTGTGTACAAAGTTATTTTTTTCCGAATGGGGTGCTAATATGTTGGATACTGGTGTTTTTGTCTTAAATAACATGGAAATTGTGGTGAATAAGAAAAAAAAATTGAAACTATTTTATAGCAAAGAAAATTTACCTAGATTAAAATTGGGTAGATTTTGTTATATTTTAAATAATTTTAATTTGTTATTAGTAAACTTGTTTGTATTTTTAAAATCTATTATCTACTATTTTTCCAAACACACTTTTATGTCACTTGCTTAAAATAGTTACGTGTAGTACAAAAATTTGGTAAAAGACTAAAATATCTATGCTCAACTATTGTTTCACATGCTTCTTCTCAACTTTCTCACTTTCAAAGTTATTACTAATAGCAGTTGTTGGTGATAGTCATTTATAATTATCACCGGTAGCAACTATTAGTGATAGTCATATATATATATATATATATATATGTACATATCATTGGTTGCAGTTCTCGGTTGTTATAAGCTGCTATTAGTTGATATTGTTGATAGCTATTAACAATGATAACTTTCTATTTGCCACAATTACTAGTGCTTCTTTCTGGTTTTCTCAAATTGAAAGATCATCATGATAGTATCTATCGATGATACTTTTATAAGTTGGTATCACTAATAGATGTTATTAATAATTGTTTTCAATTTGAGAAATGGGCTATCAAATTAATGATAGCCATTTAAGAGCAAACTTGACGTTTAGAACAATCTACCAGTAGACTGATCAAACAGGGGTGTTCAAATAACCTGACAACTGAAACAACTCGAATCACCAAACCTAAAATGTGAGGGTTGAGTTGGGTTAAACATTTTTTGTTTTCGTTGGGTTGGGTTGGATTGCAAGTTGGCTAAAAAAAATTTGGGTTAACCCAATCAACTTGAATTAACACATATATGAATAAAATATTTATTTATATTTTTCTTTATTTAAAATTGGACTAATTTTATTGATTAATTTGTCCATCTTTAATATTCTTCCTTCAGTATAGCTATTCTTTTGTTTAAACTTTGTATATCATATATATTTGGTATTTTATATGCCAATCTAATGAAATTTTAGTTATTAACCATGTGTTAGAGAAATTTCAACGAGTAACAAAAATTGAAACTAGTTACAAAATATAGCAAAAATAAAACTTAAACAAGACGGTAGTTAAATGAATTTGGTTATAGTGGTTTCAATATTTTACCATTTTTGAAAATATTTATTAATAAAACTTACATATTTTAAATTAAAAAGAAAAAAAATTAGGGTCTTTAACTAATATGGCTTAAAATTGTACACCATATTACAAGATTGACCTAAATTTCACAATTTTTTTCCAGAAATGTCCTAAATTGACTAATATTTTCCATAAATATAGGGTTCAGATAACCAATTTAGTCATCTTTATTATTAATAATATATTAAAAAATAGAAAAAGAAAAAAGGAAAGGAAAATATGTTTAAAATTTGCATTTATTAGATATTCTATGTAAATATGGTAAGTGCTTAAATTCTATTATAGTAATATTATTAATAAAAATTGTCCCTTAATTAGTTTTCTTTTTATGATTTTTTTTTCAAAAATTCTCCCCTTCTAGTTTTTCTTTCACTTTCCAATCTCTCTCTCCGTCTATTCTTTCTTTCATTTTGCATTATTTTTCATATATTTTATGTAATTACAGTATATATTGAATAATACAGTGTATATTTTATTAATGAAAGGTTATTATATCAATTTGTTTATGTATTTTATTTAAATATTCATATCTTACGTAATAAATAATACGTTGTGATTGAAATAATATTGATTATATATGAAAGTTGTTTATGTTTACAGGAACATGAATGAGAAAAAATTATAATGATTATATGTAATATATGTCATTAAAATATTAGTTGTTCTCTGGTATATGTAATGTTGAGAAAAATTGAATATGTTTGCAATGTAGGAAGTTTTATTAAAGAATTGAAGATCCAAGGAATTGTATGAAAAAAATGGTTGAATGTTTTATTAATAATATATATGAAACAATACATTTTATATTTTATGAATAAAAGGTTATGCAATCAATTTGTTAAACTAGTTTATGTATTTTACTTCAAGTATTCATTTTATATGTAATAAATAATAAATTAAGAGTATATTATAGTATATTTTGTTCATTTAAGGTTGGTAAGAATTTATATTTTGCATTCGAAATACACTATGGTATATTGAGTATATCAAAGATAACATCATTTATGTATTATTGAATATATGAAGTAGTATATATATGTGACAAATCACATAAATATATGTATTATGTAGTAGTATATATGTAAGAATTAAAAAAAATACTTATCGGATACATAATCCATGTTAAATGCAGTAAGAAAAAAACACAGAACATAAAAAAATATGTGTATGTATTATTGAATATATGCAGTCGTATATATGTAACAAATCACAAAACATAAATGTTCAGTAGCATATATGTAAGAAATATAAAAAAATATTGAATGAATATATAATCTGTGTATATATTGGTATATATACACCGTAAGAAAAATCACAGAACATGAAAAAGAATATGTGTATGTATTATTGATCAATATATGCAGTAGTATATATGTTACAAAATACATAATATAAATTTATTATTCAGTGGAATATCATAGTATATACGAATGACGAGACATTTAATAAAAATTATATGTTGAACATGACGGGAAGATGAACTGAACAATAAAAAATTAAACAAAATAGGAGGGACACGATTGGAATATATGCTACGAAACTGAAAAAGAAAGAACAAATTTTTTAAGAAAAAAAATATATACTACAAAATGAAAGAAGAAAGAATACATATGTCATATTGTATATATGAAGTGGTTTATATGTGTAAACAAAATCTCGGTAAAGTACGAAATTTGAAGAAAAGAAAAACGAAAGTAATTGATCGAAATTGGAAGAAAAAGAAAGTAATTGAGAAAGATAACTAGTTGAAAGTTGTATATAAAACGAAATTTTGAAATAAACTAAAGAACGAAATTGAAGAACGATATTGATAACAGTGAAATTGATGGAAGAAACGATCGAAATTGAATTATGAAATTTTCACCGGTGCTAAATTTTTTATCTTAGAATGTTCAAGGGTGATGCAAATAATGATGTATTATTATTTTTAATCATTAAATAATTCTATATTAAAGATGTTTTCAATTTATATTGAATTAATAACATACTTCTAATTAATTTCCATAATAAATTTATACCTTAATTAATAGGTCAAACAAAACAGTTGTCATTTAAATAATTAATTAAGTATAATATAAATAAAGAAATCATTTGAATTTAATTTCAAAAATTATATATAATTAATAATTATTATAAGGTTATAAATGTTTTAAAAATTTACGAAAACTGAATAAAAAAATAAATCATAATTTAGAACATTTGTAATTTAGGTTTTGTCTAAAATCATTAAAAAAAAATTATAACCAGTCCCATCTAACCCAACTAGAATTTAAAAGGTTGGATTTGCTTTAATTTTTGGGTTGACTGGGACTATAGCAAATTACTATAAATTAATTAAGGATGTAGCAAATCTTTAAAACAATTGCAAATGTGGCAAATTTTAATTAAATTCTAAGGTAAAAGACGAAAATGCCCCCCAAATACACTTTACGTATATTCCTTCAGTCTTCCGCTTTCTTCTCTTTTCTTCAGCTTCACTTTGTATTCCTTCTGTCTTTCGCTTTCTTCTCTTTTTTTCGGCTTCACTTCGTATTCCTTCCGTCTTCCGCTTCTCTTTTCTCTGGATTCACTTCGTATTCCTTCTGTCTTCGACTTTCTTCTCTTTTCTTCGTATTCGGCTTCACTTCAAAATTTATGCTTCAGTTCATGTATTTTTTTTTCTGTTTGTTCGTAATAGATTTGAAATAGGTTTAGAGGATGTTGAACTTGTTTGTATTGGGATATTGAACTTGTTTGTTTGGTTTCTTTAGTTTAATGTGCATATTATGTGTGAGATGTTGCTTATAGTCTATCAATGATATGTTCTTGTCAGTGATTGATAGATTTGGAGGATGTTGAACTTGTTTTTTTGGCATGCTAATCTGTTTTCAGTTTGTTTTTTTGTTGCTTAGGGATATGGTCTATCAGTGATATGTTCGTGATAAACTTGAGGGGTGTTTAGTTTGTTTGCATTGAGACGTTAGTAGATGCTTTAGTTTAATGTGTATTTTTCTATATGTTGTTGCTTATGGTTTATCAGTGATATGTTTCTATTATTGATAGACTTGATAGACCTTGAGGATGTTTGGTTTCTTGCGGTAAGGTGAGTTGGTGGATGTTTTAGTTTAAGTGTTGTTTCTTAATCTATCAATGATACGTTCTATCATTGATAGACCTGGAATATGTTTAGTAAATACTTTAGTCTAATGTGCATATTTTGTGTGGGATGTTGCTTATGGTCTATCGGTGATATGTTCTTGTCAGTGATTGATGGATTTGGAGGATGTTGAACTTGTTTCTTTAGCATGCTAATCTGTTTTCATTTTGTTTTTTGTTGCTTAGGGATATGGTCTATCAGTGATATGTTCGTATCAGTGATAGACTTGATGGGTGTTTAGTTTGTTTGCATTGAGACGTTAGTAGACGTGTTAGTTCAATGTGTATTTTTCTATATGTTGTTGCTCATGGTTTATCAGTGATATGTTTCTATTATTGATAGACTTGATAGACCTTGAGGATGTTAGGATGTTTGGTTTGCTTGCGGTAAGGTGCGTTGGTGGATGTTTTAGTTTAAGTGTTGTTTCTTAATCTATCAATGATAGAACGTATCATTGATAGATCTGGAATATGTTTAGTAAATACTTTAGTCTAATGTGCATATTTTGTGTGAGATGTTGCTTATGGTCTATCAGTGATATGTTCTTGTCAGTGATTGATGGATTTGGAGGATGTTGAACTTGTTTCTTTGGCATGTTAATGTGTTTTCATTGGATTGATGTATTTATTGTAATTTTAATGGATGGATAAGAAAAAATTTACTATGGAAAAGGAACCAAAAGAAAAAGGGGTAAAAAGAGCCTCAATACATTGAAGGTGAATCAAGCAAAAAAAAAAAAAAAAAAAAGTATCCCACTATATATATATATATATATATATATTCTAAATTGTTACATTGCATAGTTGTAACAATTATTTTGCTTTAAACAGGGAAAATAACTAATTATCCCCAAAGAAATGTGGAAGTCTACCTTGAGAATCACTGTGTACTGTAATCTACAAACTACAGACCATATTATTGAAAGCCTATCACCTAGTTGTCTAGATTTGTTTAAAGAAGGACCATCTGCACACTTACTAAATCTGAAAATGACCAAAATACCTTTACAACTTTTAGCACAATTGATTAGAAGACAATGTGTCTCGATAGACAACAGTGCTATTCTTTTCAACATTGAAGGTAAAACTGTGGAGTTTGGCTTACAAGATTTTTGTTTGATTACAGGGTTAAATTGTGGTGAATAACCTATTGAGGATGTTTTGGATACAACAGAAGAAAATGAGTGGATGGTTAAACAATTGTTTTTTAGAAATAATACTTCTATTAGTAGACAAGAATTGAAGACTGCTTTTAACTATCACTGTAAAACCTGTAATAATGAACAAGAACTAGCAAAATTAGCCAATCTTTACTTCCTAGACAAAATCACAATATTTTGGATTTGAAACATGTAAAAATGTTGGATGATAAAGAGAAGTTTAGGAGTTATCCTTGGGGAAGGTTGTGCTATAGTTTGACAAAACAATTAATTCAAAATGCTTTAAAATCCAAAAGGAAGTCTAAAAACTCAGAATCAGAATCTAAATCGTGTGCCTTTCTACAAGGCTTCCCTATAGTTCTTGCTTATTGGGCATACAAAATACTTTCTCAACTTGCTAATGGATATGTGACAAGAATAGGAAAAGGCTGCCCCAGAATACTAAATTGGGAATCCAGTGTACAAGTAGATTGGCAAGATCTTGAAGCCAACGTGTTTCTGGAAAAAAAATGTAAGTTTTTAATTTGTTTTCTTTTTTAGTGTTTTCTAAATTTGTCGTTAATAAAAGTGATATCTGTTATTGAAAGATTGTCACCAATATCACTGATATTGATCTATTAGCGATAGATTTGTATCAGTGATAGATCCATATCAATGATAGACTGCTCTCTACAAATATATGTGCATTTGTTTTTTATTTATTTAATACTGAATAAATATTTTTTTAGCTATCTGTGGTCCCCATTGTTGCATCTGAAGAAGAAATGGCATTTGAGTACTTTAGATATTTTGTGGAGTTAGAAAATGATAGATTGGTTGACGAAGCATATGTTGTAAAGGATAAAAATATTGTAGAAAGAATATCTTCTTTACATGAAGATATTGAAAATTTAAAAAAACAGCACAAAGAAGATTTAGACCACCTGAAAAAGGGACAAGAGGAGATCGTTCATTTGTTACTTTCCCTAACAGAAGTTGTGAATCAAAGACTTCCGCACAAATGTGAAAGTGAAAAACAATCTGAAGAGTCCTTGGAAAAGAATCATCCTCCATCAATGAGTCTAGAAATGATAGATGCTAATATTGATACTAACATTGATAAAGCAGTTGCTTATGCAACCTCTTGCACAAAAGAGAAAGAGGTAATATTATTAAAGCTTCTAGTTCTTTTACTTTTATTTTTTCCAAGACTATTACTAGAGTGTGTTTGTGAGTGAAAAGTATATCAATGATAGAACTGTATCAGTGATAGACTATTCTTTCTTTGATTGAAGTCTATTAGTGATAGGGTTCTATCAGGGATACATTATTCTTAAATCTTATGTGTGATTGTGTAGTCAATCAGTGCTGAATATTAACAGTTTCTGTAATTTTTTTCAATGCAATACTAATATTAATTTCTACAAAAGACTGTAGATAACGACGAAACTGAGGAAGATGATGATAATCATCGTGAAAATAAGTCAAAAGTGGTGCATGACATATCAAAGAAAGTGAAGGTATTATAATAATCACAATTGTTGTTTTATGATAGACTCAATGTGTCTATATATAAAACTCTAATTCAATTATTTTTTTCAGGTTGTTCAAGAAAAGGCAAAAGCGAAAACTATGGAAATAGTGAAGAACATTGAAAACGTTAGGTCGAAGAGACAACCTAAACCGTCAAAGAAAGTGTTGGAGAATGTGAAAGATCAAAAGAAAGAAAAAGATCAAAAGAATCCAAAAGATAAGATGAAAGAATTTCCAAAAATAACAAGACAGTCTCCTAGAATAAAGGATTTTGCCCCTAGTTTTGATTTGAAAATCTCTCAATTATGAGTATGGATATTGTAGCTAGTGCATTAGTTTTGTGAATTTTTGTGATAGTTCACATTGACATTGTAGTACATTAGGAATTATGGTTCTTTATGTTAAATTGTTGTGACTCTTTAATGGATGTTGAAATTTATCAATGATAAACCATATAGGTGATAGACTCTACAATGCCTTTACACCTTCATATGTAGTTTGATATTACTATATTAATTGATAAAAATGTTGGATTACAAGTTACTTTGTCTCTGTTTGCATCAGGATTAGTATTTGACATGAATCACAGGTTGAACTATTGGCGATAGACTACACAACAATGGTTTTTATCACAAGTTGAACAAATTGGTGCATTTTATAGTTTCTATCATTGATAGAAACTATTGACGATAGACTACACAATAATGGTTTTTATCACAGGTTGAACTAATTGGTGCATTTTATGGTTTCTATCACTGATAGAAACTATTGACTATAGACTACACAATAATGGTTTTTATCACAGGTTGAACTAATTGGTGCATTTTATGGTTTCTATCACTGATAGAAACGATTAGAGATAGATTTTTATATGTATTAGTACTTTACAAAAGGTAGATTATTATTGACTACTTAAAAAAAAAAGATGTTCTCAATGCTCAAGCTAAAAGAGTATTATAAAAAACATAATGTCATATCATTGTAAAAATGGTGGAAATTTGAAATTTCTACGATTGTGACCAGCACAACGACAATGACTGCATTTTGGTTCACTTTTCTTCTCACCAATTGATAATATTTTTTGTTTTCACGGTCTTCCAGCTCGACGCTTGAAAACTGGAGGAAGTATGTTCATGTCAACCCCAATAGATTTCCAATTAGAATGGTTCCCAACTAGACGAACTGATCCAGTATAAGCTAAAACCAAAGTGATTGACAAAAAATAATTGGAATCAAAAGAGTAAGTATTCATATTGCGCCCACGAAGAACAACAAGTGCATGAGCCCATGGAATTTCATCAAGATCCCAAACGCGACAGGTACATGATTTTCAATTTAACTGTACCATAAATTGTTTTCTTCCATCAATCATGAAATTCAACATCATTAATAGCATTAACCTTAAAAAAAAAAACAAACTTAGTCAACACATATGGTCTATCATTGATAGAATCTATCACTGATGCATAATAAGAATATATTCGTGATAAAGTCTATCATTGATAGGTCTTGTTATATTACCCACTAATTAAGTAAATAAACATTAAAACACAAAAACTTACTGTGAAGCTTCTTGAGTTTTGATGTTGTATACGTAATTCTCCTTCAGCCAAACTAGTTAAAACCAATTTTGAAGTATTTGCCTGATAGAATCGAGTAGTGTTGCAACAAACAAATCTCTAGATTCTTTTAGAACTGAATTTAAGCTTTTTAAAATATTTGTAGTCATCATTTGATATCTTTTCTTTGTACAATATGTTGAGCCCACTTTTTGAAACCAACCTTACTAAGATACTCTCTTATACTAGGATACATAGACTCCATCCATCTCATATTAGTCTCAAAATCAACAACAGTATATGCTTTTCCACATCTAAAAAAGAGCTTATCAATTATAGGGTCCTTATACATCAACTTCAAACTTTTTAGAAGGTGTTGCAAAAAAACGCAATATTCAGCATTTGGAAAAACGTTATGAACACTTTTCGGAATACTTAAATGTCGATCAGATATTACAACTAAACCTTCCCGATCCCCTAAACTTTTCTTTATATTCTCAAAAAACCATCTCCAGGATTCATCATTTTCGGAATCTACAATACTGAAGGCCAATGGAAAATTTTTATTATTACCATCAATTGTTGAAGTCGTCAAAAGAGTTCCACCATATTTAGATTTCAAAAAAGTGCCGTCAACAGATATGTTGGGTCTACAATATTTTCATCCTTCAATGGATGCTCCAATAGCCATAAAACAATACTTAAAATGTCCCTCTGTATCAGTTTCATGAGCAGTGAATGAACCTGAAATAAAAAATACATATATACATTATATCAAAGACAAATAACATTTTCTTTTACTATATATTTGTCACTGATGTAGTCTATCACTGATACTTTATAGTAATTAGCACATCACCAGAACTATGTAACTAATATGGTCTATCATTGATAAGGACTATTACTGATACGGGCTATCACCGATAGAACCTATAGTAAACCACCATATCGTCAGTTTGATGATATACTCATTCACTATCACTGATACGGTCTATCATTGATAGATCCTATAGTAAACCACTATGTCATCAGTCTCATGATATGCTCATTTACTATCACTGATACAACATCTATCACTAATCGATCCTATAGTAAACCACCATGTCATCTGCTCATTTACTATCAATGAGACGGTATCTATCACTAATAGACCTTATAGTAAACCACCATGTCATGTCTGATGATATGCTCATTCACTGTAGGACCTACGACTGATAGACCTTATCAGTGATAGACCATATCATTAAAAGTTTAATTGATGATATAAATTGTAAGAATAAAAACATACCTGGGTTAATTTCTTTTAGTTTTGTAAAAAAGTTGGGAATCAAGGCATAAGATTCTTTTGCTTCACCATTCAAAGAATTCATAACAAGTTCCTTTTCCCTCCACGCTTTATAGTAGCTAACGTTTACACCAAGTTTAGTGCGCATGTGAATCATAATATCATTTGGAGTCGAATGGTCAAAAGAACTAAAGTCTTTTATCATACAATCACTAATCAATGCTGAAGATGCTTGTCAATGAGTAGTTTGAATAACATTCATGGAGCAATCATGATTAGCAATATACTTTCTTAGTCGCCATAATTCCTCACCCTTGTAACAAGATGCACGGACATACCATGAACAATTATCTTGGGAGCACTACTCAATAGATTTAGAATGTGATCTTACAGTCTTGAACTCAAAATTGTTCTTTATAGCAATGTAGTAAAATGACTTTGATAGTAGTTCCTTGCTAGCAAACATATCATTTTCTTTCAAATCGAATGTAGAAGACAACCTACTAACATGAATATCCTTAAGAATTTGAAAATCATCATCAATTGAAGAAGAAGGTAGCAGAGAAGGCAAATTATTCGTCCCACTGTTAACAACACTAGATGACCATTCTAAATCCATAGAGACATGAGAAGCATGGACAACTAATGGATGTCTTGTAATTTGCCCTTTAACTAAACTTAGAAACCAAGCAACATCTTTATCTTCATGAATTTCAACCACAGTTTGAATATCAGTGATGCCATAATCCAATAAGACTGACAATTGTATTGAAGAAGGAGATGCATCCAATCGAACTTCCCTTAATATCAAGCTCACTAAATTTTCAAAACAAATTGTCTTATCAACCAATACACCTGTAGTCTTGTAATTCAAGTATTTATTTGTATCATCCAACTGTGCACTATGAAACACTATTATTGGAAGCTTAATCATAATTCCAAATTACTGCAAAATAAAATAAAACAATTATCATCCTAGTATTACATTGAAATATTGATAGAATCTTTAAAGAAAACAAAGATCAAATGTAAAATATTTAAAGAAAACAAATTTAATTACATACCAGATGATTTAACGAAAGATCGTTGTAAAGTTGTTGGACGTTGAGAACGACTAGTTGGAGGACGACTGATTGGAGGCGCACGATAAGGTGATCTTTAGGAGAAAATCACAAAGAAGATGGAGAAGGGAGAAAATAGCGAAGAATATGGAGAAGGGAGAAAATCGTGGAGTAATGACGGTGAAGATGGAGAAGGAGAAAATTGCACTAATTTCCTTTTAAACCGAGGGTAATTTTGGAATATTTTAAAGAATAATTAAAAATTTGCTATATATGCAAATTGTTTAAAAAATTGCCATATACTTAATGTTTTATGTCAAATAGGTTACCGATTATAAATTCTCTTAATTTTTCAACCTAAATTTTCAGGTTGGTCACGGACCCTAAACCAACCCAATCCATCCATTTACACTGTAGGTGAACTAATTGGGCCTGGAGCTATATGCACTATTGGGCTTAACAGCAAATACTAAACCTAATGAGCTCAATGAAAATAGTATTTTGAGAGCAGAACGTTGATTGTTCCCTTTCAAATCGCCCGTTGGGAATTCTCAATCCACATATTTTTACAGACTTAA

mRNA sequence

ATGAAATGGAACCCATTCAGAAAGCTGGGAGAACTCCGACTTTTTGATGTTGAAGAATCGGAACAATGGGAGTGCGTTAGGAGAGAACAAATTCAAGAAAGGTATAATAAGCAAAGCAAAATGAGAAGAGCATCAGATTTTGCGGCTTACACTACGCGGTACGCAACTAGTCCAACAGCTAAAGTTGCTAGCAATGCCAACAAACATAGATCGTGTATCCTATCTGTGGTCCCCATTGTTGCATCTGAAGAAGAAATGGCATTTGAGTACTTTAGATATTTTGTGGAGTTAGAAAATGATAGATTGGTTGACGAAGCATATGTTGTAAAGGATAAAAATATTGTAGAAAGAATATCTTCTTTACATGAAGATATTGAAAATTTAAAAAAACAGCACAAAGAAGATTTAGACCACCTGAAAAAGGGACAAGAGGAGATCGTTCATTTGTTACTTTCCCTAACAGAAGTTGTGAATCAAAGACTTCCGCACAAATGTGAAAGTGAAAAACAATCTGAAGAGTCCTTGGAAAAGAATCATCCTCCATCAATGAGTCTAGAAATGATAGATGCTAATATTGATACTAACATTGATAAAGCAGTTGCTTATGCAACCTCTTGCACAAAAGAGAAAGAGACTGTAGATAACGACGAAACTGAGGAAGATGATGATAATCATCGTGAAAATAAGTCAAAAGTGGTGCATGACATATCAAAGAAAGTGAAGACTTAA

Coding sequence (CDS)

ATGAAATGGAACCCATTCAGAAAGCTGGGAGAACTCCGACTTTTTGATGTTGAAGAATCGGAACAATGGGAGTGCGTTAGGAGAGAACAAATTCAAGAAAGGTATAATAAGCAAAGCAAAATGAGAAGAGCATCAGATTTTGCGGCTTACACTACGCGGTACGCAACTAGTCCAACAGCTAAAGTTGCTAGCAATGCCAACAAACATAGATCGTGTATCCTATCTGTGGTCCCCATTGTTGCATCTGAAGAAGAAATGGCATTTGAGTACTTTAGATATTTTGTGGAGTTAGAAAATGATAGATTGGTTGACGAAGCATATGTTGTAAAGGATAAAAATATTGTAGAAAGAATATCTTCTTTACATGAAGATATTGAAAATTTAAAAAAACAGCACAAAGAAGATTTAGACCACCTGAAAAAGGGACAAGAGGAGATCGTTCATTTGTTACTTTCCCTAACAGAAGTTGTGAATCAAAGACTTCCGCACAAATGTGAAAGTGAAAAACAATCTGAAGAGTCCTTGGAAAAGAATCATCCTCCATCAATGAGTCTAGAAATGATAGATGCTAATATTGATACTAACATTGATAAAGCAGTTGCTTATGCAACCTCTTGCACAAAAGAGAAAGAGACTGTAGATAACGACGAAACTGAGGAAGATGATGATAATCATCGTGAAAATAAGTCAAAAGTGGTGCATGACATATCAAAGAAAGTGAAGACTTAA

Protein sequence

MKWNPFRKLGELRLFDVEESEQWECVRREQIQERYNKQSKMRRASDFAAYTTRYATSPTAKVASNANKHRSCILSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHKEDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANIDTNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVKT*

Homology

[Close]

BLAST of Chy4G071870 vs. ExPASy TrEMBL
Match: A0A5A7VIA9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00090 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.1e-51
Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVVPIVASEEEM  EYFRYF+ELEND+L +EA  +K+ N+ ERISSLHEDI++LKKQHK
Sbjct: 113 LSVVPIVASEEEMKSEYFRYFLELENDKLDEEACAMKESNMAERISSLHEDIQDLKKQHK 172

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDL+ LKKGQEEIV LLLSLTEVVNQRL HKCESEKQS+E LEKN PP +SLEMIDA++D
Sbjct: 173 EDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADVD 232

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 242
                         KEKE  DN+ETEE DDNHRENKSK+VHD S KVK
Sbjct: 233 --------------KEKEIEDNEETEE-DDNHRENKSKMVHDTSNKVK 265

[Close]

BLAST of Chy4G071870 vs. ExPASy TrEMBL
Match: A0A5D3DFX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3009G00010 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.1e-51
Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVVPIVASEEEM  EYFRYF+ELEND+L +EA  +K+ N+ ERISSLHEDI++LKKQHK
Sbjct: 113 LSVVPIVASEEEMKSEYFRYFLELENDKLDEEACAMKESNMAERISSLHEDIQDLKKQHK 172

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDL+ LKKGQEEIV LLLSLTEVVNQRL HKCESEKQS+E LEKN PP +SLEMIDA++D
Sbjct: 173 EDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADVD 232

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 242
                         KEKE  DN+ETEE DDNHRENKSK+VHD S KVK
Sbjct: 233 --------------KEKEIEDNEETEE-DDNHRENKSKMVHDTSNKVK 265

[Close]

BLAST of Chy4G071870 vs. ExPASy TrEMBL
Match: A0A5D3C8N2 (40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00170 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.1e-51
Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVVPIVASEEEM  EYFRYF+ELEND+L +EA  +K+ N+ ERISSLHEDI++LKKQHK
Sbjct: 113 LSVVPIVASEEEMKSEYFRYFLELENDKLDEEACAMKESNMAERISSLHEDIQDLKKQHK 172

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDL+ LKKGQEEIV LLLSLTEVVNQRL HKCESEKQS+E LEKN PP +SLEMIDA++D
Sbjct: 173 EDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADVD 232

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 242
                         KEKE  DN+ETEE DDNHRENKSK+VHD S KVK
Sbjct: 233 --------------KEKEIEDNEETEE-DDNHRENKSKMVHDTSNKVK 265

[Close]

BLAST of Chy4G071870 vs. ExPASy TrEMBL
Match: A0A5A7VE89 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00660 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.3e-51
Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVVPIVASEEEM  EYFRYF+ELENDRL +EA  +K+ N+ ERISSLHEDI++LKKQHK
Sbjct: 53  LSVVPIVASEEEMKSEYFRYFLELENDRLDEEACAMKESNMAERISSLHEDIKDLKKQHK 112

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDL+ LKKGQEEIV LLLSLTEVVNQRL HKCESEKQS+E LEKN PP +SLEMIDA++D
Sbjct: 113 EDLNCLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADVD 172

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 242
                         KEKE  DN+ETEE DDNHRENKSK++HD S KVK
Sbjct: 173 --------------KEKEIEDNEETEE-DDNHRENKSKMMHDTSNKVK 205

[Close]

BLAST of Chy4G071870 vs. ExPASy TrEMBL
Match: A0A5D3CTS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00380 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 9.6e-45
Identity = 109/156 (69.87%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 86  MAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHKEDLDHLKKGQEE 145
           M  EYFRYF+ELENDRL +EA  +K++N+ ERISSLHEDI++LK+QHKEDLD LKKGQEE
Sbjct: 1   MKSEYFRYFLELENDRLDEEACAMKERNMAERISSLHEDIKDLKEQHKEDLDCLKKGQEE 60

Query: 146 IVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANIDTNIDKAVAYATS 205
           IV LLLSLTEVVNQRL HKCESEKQS++ LEKN PP +SLEMIDA++D            
Sbjct: 61  IVCLLLSLTEVVNQRLSHKCESEKQSQKPLEKNPPPPISLEMIDADVD------------ 120

Query: 206 CTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 242
             KEKE  DN+ETEE DDNHRENKSK+VHD S KVK
Sbjct: 121 --KEKEIEDNEETEE-DDNHRENKSKMVHDTSNKVK 141

[Close]

BLAST of Chy4G071870 vs. NCBI nr
Match: KAE8650946.1 (hypothetical protein Csa_001290 [Cucumis sativus])

HSP 1 Score: 293 bits (750), Expect = 1.96e-96
Identity = 153/168 (91.07%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVV  VAS+EEM+ EYFRYFVELENDRLV+EAYVVKDKNIVERISSLHEDIE+LKKQHK
Sbjct: 105 LSVVSNVASKEEMSSEYFRYFVELENDRLVEEAYVVKDKNIVERISSLHEDIEDLKKQHK 164

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDA+ID
Sbjct: 165 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDADID 224

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 241
           +NID+AVAYATSC K KET+DNDET+EDDDNHRENKSK VHDISKKVK
Sbjct: 225 SNIDQAVAYATSCAKNKETIDNDETKEDDDNHRENKSKTVHDISKKVK 272

[Close]

BLAST of Chy4G071870 vs. NCBI nr
Match: KAE8651836.1 (hypothetical protein Csa_006724 [Cucumis sativus])

HSP 1 Score: 288 bits (738), Expect = 1.30e-94
Identity = 151/168 (89.88%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVVPIVAS+EEM+ EYFRYFVELEN RLV+EAYVV DKNIVERISSLHEDIE+LKKQHK
Sbjct: 105 LSVVPIVASKEEMSSEYFRYFVELENHRLVEEAYVVNDKNIVERISSLHEDIEDLKKQHK 164

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDLDHLKKGQEEIVHLLLSLTEVVN++LPHKCESEKQSEESLEKNHPPS SLEMIDA+ID
Sbjct: 165 EDLDHLKKGQEEIVHLLLSLTEVVNKKLPHKCESEKQSEESLEKNHPPSTSLEMIDADID 224

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 241
           TNID+AVAYATSC K+KETVDNDE EEDDDNH ENKSK+VHDISKKVK
Sbjct: 225 TNIDQAVAYATSCAKDKETVDNDEIEEDDDNHCENKSKMVHDISKKVK 272

[Close]

BLAST of Chy4G071870 vs. NCBI nr
Match: KAE8653073.1 (hypothetical protein Csa_019650, partial [Cucumis sativus])

HSP 1 Score: 224 bits (571), Expect = 2.60e-71
Identity = 115/132 (87.12%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 80  VASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHKEDLDHL 139
           ++SEEEM+ EYF+YFVELENDRLV+EAYVVKDKNIVE ISSLHEDIE+LKKQHK+DLDHL
Sbjct: 1   MSSEEEMSSEYFQYFVELENDRLVEEAYVVKDKNIVEIISSLHEDIEDLKKQHKKDLDHL 60

Query: 140 KKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANIDTNIDKA 199
           KKGQEEIVHLLLSLT+VVNQ LPHKCESEKQSEESL+KNHPPSMSLEMID +IDTNID+A
Sbjct: 61  KKGQEEIVHLLLSLTKVVNQILPHKCESEKQSEESLKKNHPPSMSLEMIDVDIDTNIDQA 120

Query: 200 VAYATSCTKEKE 211
           VAYATSC K+KE
Sbjct: 121 VAYATSCAKDKE 132

[Close]

BLAST of Chy4G071870 vs. NCBI nr
Match: KAA0063839.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (542), Expect = 2.21e-65
Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVVPIVASEEEM  EYFRYF+ELENDRL +EA  +K+ N+ ERISSLHEDI++LKKQHK
Sbjct: 53  LSVVPIVASEEEMKSEYFRYFLELENDRLDEEACAMKESNMAERISSLHEDIKDLKKQHK 112

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDL+ LKKGQEEIV LLLSLTEVVNQRL HKCESEKQS+E LEKN PP +SLEMIDA++D
Sbjct: 113 EDLNCLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADVD 172

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 241
                         KEKE  DN+ETEEDD NHRENKSK++HD S KVK
Sbjct: 173 --------------KEKEIEDNEETEEDD-NHRENKSKMMHDTSNKVK 205

[Close]

BLAST of Chy4G071870 vs. NCBI nr
Match: KAA0031317.1 (uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa] >KAA0034561.1 uncharacterized protein E6C27_scaffold65G005770 [Cucumis melo var. makuwa] >KAA0035329.1 uncharacterized protein E6C27_scaffold228G001300 [Cucumis melo var. makuwa] >KAA0037560.1 uncharacterized protein E6C27_scaffold277G001820 [Cucumis melo var. makuwa] >KAA0038033.1 uncharacterized protein E6C27_scaffold36G002310 [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (544), Expect = 2.09e-64
Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 74  LSVVPIVASEEEMAFEYFRYFVELENDRLVDEAYVVKDKNIVERISSLHEDIENLKKQHK 133
           LSVVPIVASEEEM  EYFRYF+ELEND+L +EA  +K+ N+ ERISSLHEDI++LKKQHK
Sbjct: 113 LSVVPIVASEEEMKSEYFRYFLELENDKLDEEACAMKESNMAERISSLHEDIQDLKKQHK 172

Query: 134 EDLDHLKKGQEEIVHLLLSLTEVVNQRLPHKCESEKQSEESLEKNHPPSMSLEMIDANID 193
           EDL+ LKKGQEEIV LLLSLTEVVNQRL HKCESEKQS+E LEKN PP +SLEMIDA++D
Sbjct: 173 EDLECLKKGQEEIVRLLLSLTEVVNQRLSHKCESEKQSQEPLEKNPPPPISLEMIDADVD 232

Query: 194 TNIDKAVAYATSCTKEKETVDNDETEEDDDNHRENKSKVVHDISKKVK 241
                         KEKE  DN+ETEEDD NHRENKSK+VHD S KVK
Sbjct: 233 --------------KEKEIEDNEETEEDD-NHRENKSKMVHDTSNKVK 265

The following BLAST results are available for this feature:

BLAST of Chy4G071870 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G071870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIA9	3.1e-51	72.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DFX6	3.1e-51	72.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C8N2	3.1e-51	72.02	40S ribosomal protein S15-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7VE89	5.3e-51	72.02	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00...	[more]
A0A5D3CTS8	9.6e-45	69.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Chy4G071870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650946.1	1.96e-96	91.07	hypothetical protein Csa_001290 [Cucumis sativus]	[more]
KAE8651836.1	1.30e-94	89.88	hypothetical protein Csa_006724 [Cucumis sativus]	[more]
KAE8653073.1	2.60e-71	87.12	hypothetical protein Csa_019650, partial [Cucumis sativus]	[more]
KAA0063839.1	2.21e-65	72.02	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0031317.1	2.09e-64	72.02	uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa] >KAA0...	[more]

BLAST of Chy4G071870 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G071870.1	Chy4G071870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome