CcUC05G094320 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G094320
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 13992602 .. 13994243 (+)
RNA-Seq ExpressionCcUC05G094320
SyntenyCcUC05G094320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACATATTTTTGGTTTTCCTATTTCCGAAATCCCAATCGTATTCCTCCGCCGCCCGTCGTCGGCAATGGCTGCAGCGGCGCTGATGATACCCACCGCTGTGACAATAATGATTCTGCTGCTGAATCCAACCGGTTGCGATGCTCTTACATCTTTCAAACCACTTCTCAACAACGACACTTCTCGTAAGTTTCGAAAACCTTTTGATATGGAATTTCTATGAATATATTTGGAATCAAAATAGTTTTAAAATTGCTAGATTTATTTATTTGTTTTTTTTGAAATGAAACTTCGTAAACGCAAAGAAAAGCCCCCTCAAGAGGGCACCGGGAACAGAAAAATCAATATGCTAGATTTTTTTTTTCTCTTCTTCTTGTGCTCTTGTTATTTATTTTGATAATTGTACTTCTTTACAATATATTTTTAAAGTTTAAAAATATTTAATATATTAATAAACTTTTAATTTTGTGTCTAATTAATTCTTTAGAATTAAAAGTGTTTGATATATTAAAATGATTTCACTTTTAAATTAAATTTGTATCTATTAAGTTATTTTGAAGAAGATTAATTGGTCTATTGAGACATTGAATTAAAATTTGAGTTTAATAAACTCTAAACATTTATTTAAGTTTGTAGATTTTAAAAACATGTCAAATAATTTGATGTGACCTATATAAGAAAGCAATATAAAAAATTTAGAGATGCATCAGAAACAAAATTTTAAAGTTGTTTTTTTGTTTTAAAATATTAAAAAAGTATTAATAATACTTTATTAACTCTAATTTGGTCTTTGGTTCATTTTAATACTGTAGCTTCCAAATATTCTCAATTTGGTCCCGTTGTTTTATATTAAATCAATTTGATGTTTATATTTTTAAAATGTTTATTTTAGTTTTTTTACTTTTTAAGAGTGACAATTTTAATCTTTATTTATATAATTTTAATGTTATTATTTTTTTAAGAAAATGTTAAAAATAAAAATAACTAATTGGATTTTCTAGACGTCAAAATTCAATTTAGACTCCAAACGCTCCTAACAGATTTAATTAAAATCGTCACTCCTAAAATATTTAATTAAAATCGTAACTTTCTTAATGTACAAAACAAACGAAGTCAAAAGTATGAAAATTAAAATAGAGTTTAAATCAAATTAATTGCACGAATAAAATAGACATAAAACAAAATTTTAACCCGAACCTTATAAAGAATGAAAACCCATTCTTGATTTTGGAGTGGTGTCACGCAGGTGCCGGAAAATACCTCGTCGGCGACCAAGATATGGAATCGGAGTTTCTGATGGAGTCCCACATCACCCGGATCTTAGCGTCCTCCCAAAACTTCCAAACCACCTCCACTACCGATGCTAACAAAGCTTCTGGCGGCGGTTGCGGCCGGCCGCCGCGATACGACAGTTGTCTCGGCCAGAAAAGAAATAACCCGCCGCCGGAAAACTGTGGCACCTTCAATCGCGTAAATCCCTGTTAGAAAAATTACACCAAAATATCATATCCATATTTACAGCTTTTCTGTTGAGCCTTTACCATTTATATAATTTCTTCAGTCCAATCTTCACCCTTAATAAAGTTTAATGAAAAGTTTGTTGGCGAAAATATTGGTAAAATATCTCTACTTCTAAAAAGAAC

mRNA sequence

GCACATATTTTTGGTTTTCCTATTTCCGAAATCCCAATCGTATTCCTCCGCCGCCCGTCGTCGGCAATGGCTGCAGCGGCGCTGATGATACCCACCGCTGTGACAATAATGATTCTGCTGCTGAATCCAACCGGTTGCGATGCTCTTACATCTTTCAAACCACTTCTCAACAACGACACTTCTCGTGCCGGAAAATACCTCGTCGGCGACCAAGATATGGAATCGGAGTTTCTGATGGAGTCCCACATCACCCGGATCTTAGCGTCCTCCCAAAACTTCCAAACCACCTCCACTACCGATGCTAACAAAGCTTCTGGCGGCGGTTGCGGCCGGCCGCCGCGATACGACAGTTGTCTCGGCCAGAAAAGAAATAACCCGCCGCCGGAAAACTGTGGCACCTTCAATCGCGTAAATCCCTGTTAGAAAAATTACACCAAAATATCATATCCATATTTACAGCTTTTCTGTTGAGCCTTTACCATTTATATAATTTCTTCAGTCCAATCTTCACCCTTAATAAAGTTTAATGAAAAGTTTGTTGGCGAAAATATTGGTAAAATATCTCTACTTCTAAAAAGAAC

Coding sequence (CDS)

ATGGCTGCAGCGGCGCTGATGATACCCACCGCTGTGACAATAATGATTCTGCTGCTGAATCCAACCGGTTGCGATGCTCTTACATCTTTCAAACCACTTCTCAACAACGACACTTCTCGTGCCGGAAAATACCTCGTCGGCGACCAAGATATGGAATCGGAGTTTCTGATGGAGTCCCACATCACCCGGATCTTAGCGTCCTCCCAAAACTTCCAAACCACCTCCACTACCGATGCTAACAAAGCTTCTGGCGGCGGTTGCGGCCGGCCGCCGCGATACGACAGTTGTCTCGGCCAGAAAAGAAATAACCCGCCGCCGGAAAACTGTGGCACCTTCAATCGCGTAAATCCCTGTTAG

Protein sequence

MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESHITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC
Homology
[Close]
BLAST of CcUC05G094320 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESH 60
           MAAAA++IP A+ IMILLLNPT  DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESH
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESH 60

Query: 61  ITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           I+RILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK NNPPPENCGTFNR NPC
Sbjct: 61  ISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]
BLAST of CcUC05G094320 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-47
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESH 60
           MAAAA++IP A+ IMILLLNPT  DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESH
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           I+RILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK NNPPPENCGTFNR NPC
Sbjct: 61  ISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]
BLAST of CcUC05G094320 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-46
Identity = 98/118 (83.05%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESH 60
           MA AA MIP A+ IMILLLNP   DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESH
Sbjct: 1   MATAAAMIPAAMAIMILLLNPINSDALTSFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           I+RILA SQNFQT++T DANKASGGGCGRPPRYDSCLGQK NNPPPENCGTFNR NPC
Sbjct: 61  ISRILAGSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]
BLAST of CcUC05G094320 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 194.9 bits (494), Expect = 3.9e-46
Identity = 97/118 (82.20%), Postives = 106/118 (89.83%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESH 60
           MAAAA+MIP A+ IMILLLNPT  DALT+FKP LNNDTS AGKYL+GDQD++SEFLMESH
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           I+RILA SQ+FQT+ T DANKASGGGC RPPRYDSCLGQK NNPPPENCGTFNR NPC
Sbjct: 61  ISRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]
BLAST of CcUC05G094320 vs. NCBI nr
Match: TYK01622.1 (hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa])

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-42
Identity = 89/119 (74.79%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMES 60
           M A+A MIP AV  MILLLN P+ C+ALT+F+PLL+N TS   + +VG++DM+ EF+MES
Sbjct: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60

Query: 61  HITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           HI+RILASSQNFQTTST DANKASGGGCGRPPRYDSCLGQKRNNPPP NCGT+NR NPC
Sbjct: 61  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 119

[Close]
BLAST of CcUC05G094320 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESH 60
           MAAAA++IP A+ IMILLLNPT  DALTSFKP LNNDTS AGKYL+GDQD++SEFLMESH
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESH 60

Query: 61  ITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           I+RILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK NNPPPENCGTFNR NPC
Sbjct: 61  ISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]
BLAST of CcUC05G094320 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46
Identity = 97/118 (82.20%), Postives = 106/118 (89.83%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESH 60
           MAAAA+MIP A+ IMILLLNPT  DALT+FKP LNNDTS AGKYL+GDQD++SEFLMESH
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           I+RILA SQ+FQT+ T DANKASGGGC RPPRYDSCLGQK NNPPPENCGTFNR NPC
Sbjct: 61  ISRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]
BLAST of CcUC05G094320 vs. ExPASy TrEMBL
Match: A0A5D3BS53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002320 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.8e-43
Identity = 89/119 (74.79%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMES 60
           M A+A MIP AV  MILLLN P+ C+ALT+F+PLL+N TS   + +VG++DM+ EF+MES
Sbjct: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60

Query: 61  HITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           HI+RILASSQNFQTTST DANKASGGGCGRPPRYDSCLGQKRNNPPP NCGT+NR NPC
Sbjct: 61  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 119

[Close]
BLAST of CcUC05G094320 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.5e-40
Identity = 85/119 (71.43%), Postives = 102/119 (85.71%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLN-PTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMES 60
           M A+ALMIP AV  MILLL+ P+ CDALT+F+PLL+N +S  GK ++G++DME EFLMES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           HI+RILASS+N+QT STT+ANKASGGGC RPPRYDSCLG+KRNNPPP NC  +NR NPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of CcUC05G094320 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.5e-32
Identity = 75/118 (63.56%), Postives = 88/118 (74.58%), Query Frame = 0 

Query: 1   MAAAALMIPTAVTIMILLLNPTGCDALTSFKPLLNNDTSRAGKYLVGDQDMESEFLMESH 60
           MA AA+MIPT + + ILL NP  CDALT+ K LLNN+T    K L+GD+D+ SEFLME H
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 61  ITRILASSQNFQTTSTTDANKASGGGCGRPPRYDSCLGQKRNNPPPENCGTFNRVNPC 119
           ++RILA S  FQT +T +AN  S   C RPPRYDSCLG+KRN PP ENCGTFNR NPC
Sbjct: 61  LSRILAESLRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

The following BLAST results are available for this feature:
BLAST of CcUC05G094320 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948338.12.1e-4783.90uncharacterized protein LOC111452044 [Cucurbita moschata][more]
KAG6607029.12.7e-4783.90hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023523220.11.0e-4683.05uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo][more]
XP_022998105.13.9e-4682.20uncharacterized protein LOC111492854 [Cucurbita maxima][more]
TYK01622.12.0e-4274.79hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa][more]
BLAST of CcUC05G094320 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC05G094320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G9271.0e-4783.90uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A6J1KBP51.9e-4682.20uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
A0A5D3BS539.8e-4374.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LCJ43.5e-4071.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1[more]
A0A6J1CP713.5e-3263.56uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
BLAST of CcUC05G094320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G094320.1CcUC05G094320.1mRNA