Carg01349 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01349
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FAM192A_Fyv6_N domain-containing protein
Location	Carg_Chr15: 4561710 .. 4566498 (+)
RNA-Seq Expression	Carg01349
Synteny	Carg01349

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAATCGCGTGAAAATTTCCAACAGATGAACTGAGTTCGGTTCGGTTCTTCATCAGAAGCATTGCAAGGGAGGAATTCGAGAGAGAGTGACAAAAACTTGCAGGGAAGTGATTTTGTAAAACTATAATCCCTTCTAGGCCGTTTATTTTCGGTGAAAATTTCCTGTGTTCGAACTCGACGGCAAGCGAAATGGAGGACGAATCTGCGCGAGCAATCCGGCTTATGAGTTTCGTCTCTGAGGAACAGGTTCTTCTTCTTCTTCCCTTCCTTTCCTTCGATTAATTCACGTAAGATTTTGGATTTTTTCATCAAATTAATGCGAACTTATTCATGTTTTGCAGCTGGACGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTACGAGGTTCTTCAACGTTTATTCACTTTTACACCCCAATTTTAATTCTTGTAGTAGAATGGAAAGGAAATATTTGTTCTCTTAGATGAGGCAATGAACATTTAGGTTTTTGGAATAACCTCCTTACGATCAGTGTAAACTCAGGCTATGAGTTGTACTACTGCAGCTAGCAAGTAGTGATAGATCTGGTAGAAAAAGTAATCACAAATCATAACCACAACATGTCATAGCCTGTCATTCCAAACATTTGTGAACCATTGGCTTAAGAGACCCTTGTCAATTACAGCTGCGATTCCAAATGAAACTTGGGTTTTTGGGTTTAGAGGCTTGGAGTTTCCCTCTTGGCTCTGACAATGGGATTGTTTTTTCATTTCATTGTTACTTACCCAAACCATTGGAGTAATTAAGAGAAGTAACATCAAGTTGTTGAGATAGAATTATGGATCACTGATGGTTTAGTTGTTTGACTAAACTAAGAGAAGTCCAGTTACAAGATTGGATGGGGAGTCTTTCTTAGTTTACAGAGATTGACATTGAGTCTTGTGTCTTCATTCTTTGTGAATGCTATATTTTACTAGTTAGTGATCGCTTTCTCCTCTATGATGTAAACGTTTAAGTGAATTTAAGATGTTCGACAACAATTTTTTCTTGACTTATTTAAAACTATATCTCTAATAGACTAAATTATATAAAAAAAATTTTTTTGAACTTTTTACTTTGTACATTGTTTCAATTACATCCTTGAACTTTAAAACATTGCATTGATGTTCTTAAAATTTCAACAAAAGTTATAAAAGAAGTACTCTTACAACGAATAGAAACCATTTGTATCTTCTTTCAATAATATTCTTGAACTGTCAAAAGTTGCATTAATGTCCTTAATGTTTCAAAAAATGTCTTACAGTATATGGACAGAAATCATTTATGCACACCCCGTCATCTCCCTTTAATCTATGACATAATTTTGAGGACAACCAGTGGAAGGGAAAATAAGGCATAATTAGCTTGAACTCACACATAAAATTATACTAAGGGGATTTCAGAGCTAAACGGAGGACAACACGTTTGGATAAACATTTTGAATATTAATCCAAAAACTATCAATTAGTTCATGTAATCTGGTCAAGCCATGCAAAAAACCAAAGTCGATTGAATATGACCGGTTTTTCTTATACCAACCAAAAATTGCAAACCAAACTAGATTCAACTTGAGTCTACATCGTTTTCAGTATGTTTAAAAGAGGGCATTGAAGCACAGATGGTAAATGTTAGGTTGTGGTTGTAGGTAAATGATTTCTGTGAGGTCATAGATTAAGGTAGAGTAGAGAAAGAAAATGAAACAGGGAGGTGATGGGAGTAGGTAAATGATTTTTGTCCATACACGAAATATAAGGGTATTTTTTTTATAGGCCAGTGTATTGTTACAACTTTTAAAAGTTCAAAGGTATTATTAAAGTAAGGTAATAATTATTTCCTTTCATATACTTACAGTAATGGTACTCTTGAATTTTTTTTAAAGCTCAAGGGTATGATTGAAATAACGTGGGTATGTTCTATAATTTAGTCTTATTAATATTAGTACTTCAGTTGTCTTTGATGGCTTAAATCTTTGTAAGGCCTGTTTTTGTAATCTTTCATTCTTCTCAATGAAAGTACTAAAGTTTACATGCATGTACTCTGTTTATGAGCAGTTGAGTGCATAGATTTAAACATTTTTGTTGTTAACTACATTTCTCTTTTCTGGTCACAGATCTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGTGAGTGCTGAAGTGTAATATCAATTTTAATAACTCATGTACTAATATTTACTATCGATCCAATCAAGGATGCCAGATAGCAGAGACAATCAAAGATATAGGCACATCCATGCCATCATGCAAGGATTAAAATTCATGCTTATTCAACTCTTTTACTGCAGGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATATGAAACAGTGAGTCTATTTGTTTTACACTCGTTAGCCATTAGCACCGCTTACAATTTGTTAATTAGTTCAATATCAAGTAACCAAATCATATTTAGTATTTCAACACATGATTGTAAATTTGTTCTTTCATCTATTTTATTGTCAATTGAAATGCAGTCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGATGAACAAGAGCTTCGCAGTTTTCAAGTAATTATCCTTATGTCCAAATCAAGCGAACTTTCTGTGTTACTTGTTTTTCCTTTTCAATTTATTGATAAATTGTATGCTAGGGTCAAAACTATGATATCACTTTGAAGAATTGTATGCTAATCAACTGTAATTTCGTATGGTAGTAAGTATGGGACTATTGAGCATGCTATGCTACATTAGAGAAAGGCTTCCAATTCTGAGCATAAGATGCTACATTGTTTCTTTAATAGCAATGGTAGTCTGTAGCCCTTGATTAATGCACTGTCCGAAATAGCCTGAAAAATGTACGTCTATGTGTGATTTGTTCACAGGTGCAGGTGAGGCACCCTAAGTGCACGTCTCTACTTTAGCGATACAAATTTTCAAAAATAAAGTACGGTTGTAATTAAAAAAAGAAGAGTAAAATAGAGCTAGAAAAACATCAGCTTCCAAATAAAGTTGGTTTGTCCCTTTCGGTTCGCCTTTTCATCTGAAACACTCTCTTTCCACACCAATATATATGGAGAAACATGAAAATGAGACTGAAGCCAAAGATTATACGGCCAGAAGTCTAATGACAAGGAATGTGGGACGTGGACCGTGATGAATTTTAGTTTTTAAGTCTTTGTTTGACTTTTCACCCTTTGTTGTTGAGAGGTCCATACTACTTGAATCTTCTTTGTTTGTAACAGTTAATTCTCTATCTTTTATACTTCGTGTGCTGGTTTTTCTATTTTGTTTACTTACTGAAGCCGCCACTTTCTTTTGTGCATTGTGCTTAAGCTTTAGATGATTAATTCACATCAGGTTTTAAAGAATGTCTTATTATCGTAATAATTTGCTAAAAAGTTGTATTATAGAGACCATTCTTGTGGCATCTGGGTTTATTAGTTATCTCTAGCAGTGGTTTATCTTTAAGATTAACAAGTACTGAAAAAAATGATGGCAGTTCTTCAGTGTGTTTTGGGACTCGAAGAAGATTCGTATTAAGTGAATCAATTCTTGAATTCAATTGCCCGTGTTTCCCTTGTTATAGATTAGATACAGTAGCAGTAATAAACATTGCACTTAGCCTCCGAATGTAGAGTATGGAGATTTCCAGTGACCCTTTATACTACTTTGATTATTGTTCATGATAGGCCTGTCTTTTCCCAACAATTCTTTAATAACTGATGAAGGCTGCAGAAAAATATGCCACAAGTTTTTAATCAACTACCACGCTTGTGATTCTGTTCTTAGTTGTCCCTTGCTTTCTGCTTAGTGATATTACGTCTTGTCGACAATGTACATGAATACTAGAGTGGCCACTCTAAATTTCTTCTCAAGTACTGTTTCTTGATGATCTTTCAGGCAGCAGTAGCAGCACAATCTATTTTGTTGAGTGAAGTGAGGGAAATAACCCCCCCTGCTCCAGCAGCTCAGGTTGGTTTAGTTCAAACTCTACGTGCATCCAACAACTTTTTGTTTGAGTAGCCACATCATGAACGGTCAAACAATAATTCTACTATCTGATAGCAAGAACCATATTCGTAAACACTAAATATCAGCTAAACTCGTGCATATTACAAATTCTTAGATTGTTGGATGTTTTAATGAAATGTTAAACGTTGGTGGCTAGCTTGTACACGTGACTGCTATCTACTGTGTTTATTATACATACAAGGGTGTGAGTACATTCATCAGACCGGTCTGTTCTTTCCTGTCGAGATGCGATCGTGCTGGTGTAATGAAGGTTCATTGTATCAATCAGCACCTAATATCACCCTCAATTGTGTGCAGGAAAAGGCACCAGTTAGGAAAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAGAGTAAAGCCACAGGCAAAGAAAGCGAGGATCGAACCGAGAAGCCCAGAAAAAGCTGGTAGCAGAGCTGAAATCCTTAATGCCAAAGCAGAGGAGGATTCAGAATCAGTAAGAACACATGATACCAGTAGTGATAGGGCGCTTGAAGCTGCTACAACAATAGGACTAGTTTCATATAGTGATGAAAGTGAAGATGACGATTAGCAAATTGATTTGGCTATTAGAATTTCCCCCAACAATCACCAATATTGTATTAAATTTTTTGGTTTGAGTTTCTGAAATGATGAATCCTTTTTTTATAAAAAAAAAATATATTTGAGT

mRNA sequence

TTAGAATCGCGTGAAAATTTCCAACAGATGAACTGAGTTCGGTTCGGTTCTTCATCAGAAGCATTGCAAGGGAGGAATTCGAGAGAGAGTGACAAAAACTTGCAGGGAAGTGATTTTGTAAAACTATAATCCCTTCTAGGCCGTTTATTTTCGGTGAAAATTTCCTGTGTTCGAACTCGACGGCAAGCGAAATGGAGGACGAATCTGCGCGAGCAATCCGGCTTATGAGTTTCGTCTCTGAGGAACAGCTGGACGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTACGAGATCTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATATGAAACATCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGATGAACAAGAGCTTCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTTTGTTGAGTGAAGTGAGGGAAATAACCCCCCCTGCTCCAGCAGCTCAGGAAAAGGCACCAGTTAGGAAAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAGAGTAAAGCCACAGGCAAAGAAAGCGAGGATCGAACCGAGAAGCCCAGAAAAAGCTGGTAGCAGAGCTGAAATCCTTAATGCCAAAGCAGAGGAGGATTCAGAATCAGTAAGAACACATGATACCAGTAGTGATAGGGCGCTTGAAGCTGCTACAACAATAGGACTAGTTTCATATAGTGATGAAAGTGAAGATGACGATTAGCAAATTGATTTGGCTATTAGAATTTCCCCCAACAATCACCAATATTGTATTAAATTTTTTGGTTTGAGTTTCTGAAATGATGAATCCTTTTTTTATAAAAAAAAAATATATTTGAGT

Coding sequence (CDS)

ATGGAGGACGAATCTGCGCGAGCAATCCGGCTTATGAGTTTCGTCTCTGAGGAACAGCTGGACGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCTCTACGAGATCTTAAAGGAAAATAAAGACAAGCGTGATGCTGAATTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATAAATATGAAACATCAAAGAGAGAATATGAAAGGCAAATGGCTGATGCAGATGAACAAGAGCTTCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTTTGTTGAGTGAAGTGAGGGAAATAACCCCCCCTGCTCCAGCAGCTCAGGAAAAGGCACCAGTTAGGAAAGAAACTCCGGTGACTCGACCCCCGAGTATGATTATTAGAGTAAAGCCACAGGCAAAGAAAGCGAGGATCGAACCGAGAAGCCCAGAAAAAGCTGGTAGCAGAGCTGAAATCCTTAATGCCAAAGCAGAGGAGGATTCAGAATCAGTAAGAACACATGATACCAGTAGTGATAGGGCGCTTGAAGCTGCTACAACAATAGGACTAGTTTCATATAGTGATGAAAGTGAAGATGACGATTAG

Protein sequence

MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREITPPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDSESVRTHDTSSDRALEAATTIGLVSYSDESEDDD

Homology

[Close]

BLAST of Carg01349 vs. NCBI nr
Match: KAG7016669.1 (hypothetical protein SDJN02_21779 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385.2 bits (988), Expect = 3.7e-103
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD
Sbjct: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 213

[Close]

BLAST of Carg01349 vs. NCBI nr
Match: KAG6579151.1 (hypothetical protein SDJN03_23599, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102
Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARI+PRSPEKAGSRAEILNAKAEEDS
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIKPRSPEKAGSRAEILNAKAEEDS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD
Sbjct: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 213

[Close]

BLAST of Carg01349 vs. NCBI nr
Match: XP_022938625.1 (uncharacterized protein LOC111444804 [Cucurbita moschata])

HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEE S
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           ESVRTHDTSSDR LEAATTIGLVSYSDESED+D
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Carg01349 vs. NCBI nr
Match: XP_023549588.1 (protein FAM192A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.0 bits (972), Expect = 2.6e-101
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEI NAKAEEDS
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEIPNAKAEEDS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           ESVRTHDTSSDR LEAATTIGLVSYSDESED+D
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Carg01349 vs. NCBI nr
Match: XP_022993730.1 (protein FAM192A [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILL+EVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKA  RAEI NAKAEE S
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAVCRAEIPNAKAEESS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           ESVRTHDTS+DR LEAATTIGLVSYSDESED+D
Sbjct: 181 ESVRTHDTSNDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Carg01349 vs. ExPASy Swiss-Prot
Match: Q91WE2 (PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.7e-06
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 2   EDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLYEILKENK 61
           ED+S   I+   FVSE +LDE +K R E  E      D           R LYE L+E K
Sbjct: 4   EDDSNLVIK-KRFVSEAELDERRKRRQEEWEKVRKPEDPKECPEEAYDPRSLYERLQEQK 63

Query: 62  DKRDAEFNERFKHR-PPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQA 105
           D++  E+ E+FK +   + LDEDET FLD+    +   E+Q  + + +EL+ +++
Sbjct: 64  DRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELEELKEYRS 117

[Close]

BLAST of Carg01349 vs. ExPASy Swiss-Prot
Match: Q9GZU8 (PSME3-interacting protein OS=Homo sapiens OX=9606 GN=PSME3IP1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.8e-05
Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 0


Query: 14  FVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLYEILKENKDKRDAEFNERFK 73
           FVSE +LDE +K R E  E      D           R LYE L+E KD++  E+ E+FK
Sbjct: 15  FVSEAELDERRKRRQEEWEKVRKPEDPEECPEEVYDPRSLYERLQEQKDRKQQEYEEQFK 74

Query: 74  HR-PPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREI 120
            +   + LDEDET FLD+    +   E+Q  + + +EL+ ++  +    I     +E+
Sbjct: 75  FKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELKELKEYRNNLKKVGISQENKKEV 132

[Close]

BLAST of Carg01349 vs. ExPASy TrEMBL
Match: A0A6J1FKA5 (uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC111444804 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.8e-102
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEE S
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           ESVRTHDTSSDR LEAATTIGLVSYSDESED+D
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Carg01349 vs. ExPASy TrEMBL
Match: A0A6J1JZC4 (protein FAM192A OS=Cucurbita maxima OX=3661 GN=LOC111489642 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILL+EVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKA  RAEI NAKAEE S
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAVCRAEIPNAKAEESS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           ESVRTHDTS+DR LEAATTIGLVSYSDESED+D
Sbjct: 181 ESVRTHDTSNDRPLEAATTIGLVSYSDESEDED 213

[Close]

BLAST of Carg01349 vs. ExPASy TrEMBL
Match: A0A5D3BGC9 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00120 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87
Identity = 187/213 (87.79%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES+RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 31  MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 90

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRSFQAAVAAQSILL+EVREIT
Sbjct: 91  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 150

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKA VR+ETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS  EI  AKAEE S
Sbjct: 151 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 210

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           +SV+T DT+SDR LEAA   GLVSYSDESED+D
Sbjct: 211 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 243

[Close]

BLAST of Carg01349 vs. ExPASy TrEMBL
Match: A0A5A7U2Y6 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G001250 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87
Identity = 187/213 (87.79%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES+RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRSFQAAVAAQSILL+EVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKA VR+ETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS  EI  AKAEE S
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           +SV+T DT+SDR LEAA   GLVSYSDESED+D
Sbjct: 181 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of Carg01349 vs. ExPASy TrEMBL
Match: A0A1S3CR24 (protein FAM192A OS=Cucumis melo OX=3656 GN=LOC103503791 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87
Identity = 187/213 (87.79%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           MEDES+RAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILK+NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120
           FKHRPPKALDEDETEFLDK ETSKREYERQMADA+EQELRSFQAAVAAQSILL+EVREIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180
           PPAPAAQEKA VR+ETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS  EI  AKAEE S
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 180

Query: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
           +SV+T DT+SDR LEAA   GLVSYSDESED+D
Sbjct: 181 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 213

[Close]

BLAST of Carg01349 vs. TAIR 10
Match: AT3G62140.1 (CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-54
Identity = 126/215 (58.60%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60
           M DE+ + IRL++FVSEEQLDE+KK RGERVEDGT QRDR LYEILKENKDK+DAEFNER
Sbjct: 1   MVDETEKPIRLLNFVSEEQLDESKKERGERVEDGTFQRDRALYEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVRE-- 120
           FKHRPPKALDEDETEFLDK E SKREYERQ+A+ ++++LR+FQAAVAA+S +L E +E  
Sbjct: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQLANEEDEQLRNFQAAVAARSAILHEPKEAA 120

Query: 121 ITPPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEE 180
           + PPAP  +E+ P+ K  P TRP   II+VKPQ KKA+   +  ++     +  +   + 
Sbjct: 121 LPPPAPVTKEQKPIGKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQA 180

Query: 181 DSESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 214
             +SV+ + T         T + LVSYSDESEDDD
Sbjct: 181 SLDSVKGNVTGKTTE-GLQTGLALVSYSDESEDDD 214

The following BLAST results are available for this feature:

BLAST of Carg01349 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016669.1	3.7e-103	100.00	hypothetical protein SDJN02_21779 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6579151.1	1.1e-102	99.53	hypothetical protein SDJN03_23599, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022938625.1	2.0e-101	98.59	uncharacterized protein LOC111444804 [Cucurbita moschata]	[more]
XP_023549588.1	2.6e-101	98.59	protein FAM192A [Cucurbita pepo subsp. pepo]	[more]
XP_022993730.1	2.7e-98	96.24	protein FAM192A [Cucurbita maxima]	[more]

BLAST of Carg01349 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91WE2	9.7e-06	35.65	PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1	[more]
Q9GZU8	4.8e-05	33.05	PSME3-interacting protein OS=Homo sapiens OX=9606 GN=PSME3IP1 PE=1 SV=1	[more]

BLAST of Carg01349 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKA5	9.8e-102	98.59	uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC1114448...	[more]
A0A6J1JZC4	1.3e-98	96.24	protein FAM192A OS=Cucurbita maxima OX=3661 GN=LOC111489642 PE=4 SV=1	[more]
A0A5D3BGC9	1.1e-87	87.79	Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G0012...	[more]
A0A5A7U2Y6	1.1e-87	87.79	Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G0012...	[more]
A0A1S3CR24	1.1e-87	87.79	protein FAM192A OS=Cucumis melo OX=3656 GN=LOC103503791 PE=4 SV=1	[more]

BLAST of Carg01349 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62140.1	1.2e-54	58.60	CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..191
None	No IPR available	PANTHER	PTHR13495:SF1	BNAC06G18360D PROTEIN	coord: 1..157
IPR019331	FAM192A/Fyv6, N-terminal	PFAM	PF10187	FAM192A_Fyv6_N	coord: 21..102 e-value: 1.5E-15 score: 57.4
IPR039845	PSME3-interacting protein	PANTHER	PTHR13495	NEFA-INTERACTING NUCLEAR PROTEIN NIP30	coord: 1..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01349-RA	Carg01349-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus