CSPI06G35110 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTAACCTAATGTTTCACAACCAGATACTTCAAAATTTCACAATTATTCAAACGATGAAAATGTTCGGAATATGATGTCATGGGCTAACCCTAACCGTATGCCGATGGCGGATTCGGTCCGGTTCAATATTTGACCCGGGCGCGTTTCGGGTTTGGTACTCAAATCAGCGTTCTCCGGATTAAGTTTTCAGGCAGCCATTTTCCGCCCGATTGTCGACGGGCCGCTCTTTCTCGCCACCCTCGTGACGATGATATCAAAGCGGTGTTGGTGTTCGAACAGCACACAAACTGTTTGATAGAATTTCTTCAGGTGTCTACTCCACATATTTGCTAGTTTCAGTTTCGACCTAGAGTTTACATGGCATAAGCTCGGAACAGTGATCTGGGTTTTCACAGCAAGGACTTGTTTGCTATCGTCGTTCTTCTTTCTCATAGGTGAAAGTGTGAACGGGCGATGCGATCGAAAAATTGTTCCCTCAATTGATTGTTGAACCTCCCTTTTTTGCGATGCGAAGCTCTTCGTTACAGACATTGAGGACCATTGCTGGTTCTGTGAAAACTGTTATTGCCAGTTCTTCACCTGTGGTTCGGCAATCTTCTCGTTCTTATTTTGCTAATCCGAGTCTTGGGAAACTGCAAAAGGAAACTAATCCTAGTGATTTCCTCAAATGGTCTTCGCTTGGTTTCTTTCGGACTTCAAAATTCGCTACTGGGTTCAACCCATTGCAACCAAAGCCGTTGGATTCGATCATTGATATGGAGAGGGCGAAAGATCGGTCACCAGAGGACCTCGCTTCCATCTGGGATGATGTAACATTTCTTCTTTTTCTTTTGTAATTGTTTAATTTTAGCGCCAATATTCGTTTCTGTTTATAAAATTCTAAAATACTTTAAAGTTGAACTGTGTAGTCTTTAGGATCGGCTAATTTGTTAGAAGAGATTAATGTGCGAGAATAGATAGGTTTCATGAATGTGGGTACTCCGGAGCAATGTTTGAATTTAAAATCGGCGGAACCTTTGCAGTTTGTAGTCACGAGTCAATGTTTTCAATTTAAACTTTTAGTCACTTGCTGTTCATTTTGCGATGAAATAAATTTTTATACTCCACATTTTCAAAGTCTTTGCAAAATTTCCAAAATTTAGGACCGAGGGACTAGTAAATGTAGCTTTGAGAGCCCAGAAGCAGAAGTGTGCCTCATATTCACTTTGGATGGATAATCCATTTATCAAGACAAGGACAATGGCTTCGAAAAGTCTTCTTCAATGTTTTTTTTTTTAATTTAAAAGTTCTTTAAGAGAGGAATTATTTAGCTCAGTTCGGCGTATTTCCCAACTCACACCTTGGTTAAATGTTATCAATATTGGTAACTTGAGAAACCGTGGATGATTTGTTGCTGTCCTTTTCATCAATATGTGCAGTGATTCTCACATTATTTTTCGGCTTCTGTTCTACCAGTATCATTTGGGAAGAGGCCATATTGGGATATCGATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGATTGGTAATCATCAAACGTTTTGTGAATCCTTCCTCGAGTTATTTCCAGTATTTTGCTGTTCTAAATTTAGTATGTTCTTGCAGCCGATACTTTGTTATTCCTTTGTGGCGTGGAAGTGGCTATACTACCATGTTTGTTCAAGGTTTGGTCTTTAACTCGTGGCTTTTAATTATTCGTTTATATAAAAGGAAAAAAAAGTTCCTTATCTGAAAGGTGGATAATATGATGCCGTTGATGTGTATTTTGTTTTCTCCCTCTCTCTTTATTTATTAGAAATTAGAACTAGACTCTAAGAACAACTAAATATTTATAAAATTAGAATAACTCTCTTATGAATCTTCCATCATTTGGTTCGTTGTAGACTATAGTCTAATAAAGGTGGTAGTTGGTACACAAACTTGATAAAATTGAAACTTTTTAGTAAATGAGAACAGATCTCTCTGAAAACTAGAATTTCTTAGAACATTGTGAGTATTGATGCTATCACTATATCTATGGTCGATGCATCGGGTAAAACCATGCTTTTGCAATGCAGATGTGAGGTATTGATTGTCTGGGCCATTTACTTTTTCTCCTTTTGATTAAGCTGTTGGATTATGATAAATCTAATATCATATCAACACTCTAACATGCTTGCTCACTTACTGGTTCGAAATTTTGTTGAAGGTTTAACAGTGGAATTCAATATTAATTAAGGAGAAAATGTCTGCAGGATTGCAAAATTAGAAACTCCTGCATTAAAATATCAAACATGTTATGACCCCTCATGTACATTGAGCTTTGTCTCTCTATTTTCAATATTAATAATAGTGAGACTCGTATCCTTTTAAAAAAAAAACATCAAACATGTTAAGTCGCAATTCAACCCTAAAGCTTAAGTTATGTTTTGGTAAACGAATATTATATATCAACCCTAAGAATAATATTAATCGGCTATAAACAGACCAAAGCTTACAAAGAAGGTCCACAAATGGCAACAATACATACAAGTACAAAGGATTGTTGAGAGTCTGTTTGTTGGAACTATAATAGTTAGCCAGACATCCGCCACTCCTCCAAGATTCCTTGCTCCCTTTCTACCCAAATTTTCCTTAAAATAACCTTCAACTTCATTGCCTACTAACATTTTACGTTTCTCCTTATGTTTGACATACATTTGCAAGTTGTTGCTTTTATTGTATTGTTGGAAAGGAAAATCTGGATGGAAAAAGAAAATCTAAGGTAAATAAGACACCTCTAGAAAGAAAAGATAAACCGACCTCTCAACCCAGAAGCCTGATTTGTGAATTACATTCAATCCATCCAGAAATCAGCTTTCGTCCACAATGATGAACTTTGGGTTCCCACGGGAGAGGGTCTTACATCTGGATGAAACAATTGTCTTTTCTTATCTTTGCTCGTTTTGTGGCTTTTAGTTTTATAGTTTGAATTCTTGCTTACTCAAAACGGTGGTTGTGCTGGAAAATTATTGTAGAACGAGATCTTAAGTATATGTTGGATTGTGGGAAATGAAATATAATAATTCAATCCTGCCAGTGATGCTTATAGTTCAATCTAAACTCTTAACTCAGTTATATATGTAATCCATTTTGCAGTACAAACGCCGCATATCATTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACTGTGTCCTATTACAAAGAATTTGCAGAGAGCAAGGATTTGGTGCTTATTCGAGGCGATATTGTGTTTACAAGTAAGCTCACTGATGAGGAGGCAGAATGGCTTTTAGAGACCACCCAATCCTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTCAAGGATGTCTTACAAGCACTGGATATGCCCATTTTATGATTCATGCAGAACGCAGCAGGCAATGGTGCCCTCTAAGAGGTAATAATAAGAAATTTAGCCCAACATGACAATCGTTTATAGGGCTATTATATGTAGTTCCTTGTAACTTTGAATAGGCTGTTTTGATCTGTAGAGAGAATAATCAAATCGTTCATTCTTGGTATGTTCGTATCAAATCCTTCAGTCGACAGAAATATTGATTTATGCCCATCCCAAATAATGGGAACGGAGTTTCTTTTGGATCCTGGGTTGACATTTCTTTTCACTTATGGACTGAAAAGTGGGTTGTTGGTTATTTATTCAGGATGGTTTACTATTTAAGATTTTGATGTATGAATTTGATTTTTGAGAACTACAGAGTTATAAATTTGAATGCCCA TCTTAACCTAATGTTTCACAACCAGATACTTCAAAATTTCACAATTATTCAAACGATGAAAATGTTCGGAATATGATGTCATGGGCTAACCCTAACCGTATGCCGATGGCGGATTCGGTCCGGTTCAATATTTGACCCGGGCGCGTTTCGGGTTTGGTACTCAAATCAGCGTTCTCCGGATTAAGTTTTCAGGCAGCCATTTTCCGCCCGATTGTCGACGGGCCGCTCTTTCTCGCCACCCTCGTGACGATGATATCAAAGCGGTGTTGGTGTTCGAACAGCACACAAACTGTTTGATAGAATTTCTTCAGGTGTCTACTCCACATATTTGCTAGTTTCAGTTTCGACCTAGAGTTTACATGGCATAAGCTCGGAACAGTGATCTGGGTTTTCACAGCAAGGACTTGTTTGCTATCGTCGTTCTTCTTTCTCATAGGTGAAAGTGTGAACGGGCGATGCGATCGAAAAATTGTTCCCTCAATTGATTGTTGAACCTCCCTTTTTTGCGATGCGAAGCTCTTCGTTACAGACATTGAGGACCATTGCTGGTTCTGTGAAAACTGTTATTGCCAGTTCTTCACCTGTGGTTCGGCAATCTTCTCGTTCTTATTTTGCTAATCCGAGTCTTGGGAAACTGCAAAAGGAAACTAATCCTAGTGATTTCCTCAAATGGTCTTCGCTTGGTTTCTTTCGGACTTCAAAATTCGCTACTGGGTTCAACCCATTGCAACCAAAGCCGTTGGATTCGATCATTGATATGGAGAGGGCGAAAGATCGGTCACCAGAGGACCTCGCTTCCATCTGGGATGATTATCATTTGGGAAGAGGCCATATTGGGATATCGATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGATTGCCGATACTTTGTTATTCCTTTGTGGCGTGGAAGTGGCTATACTACCATGTTTGTTCAAGTACAAACGCCGCATATCATTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACTGTGTCCTATTACAAAGAATTTGCAGAGAGCAAGGATTTGGTGCTTATTCGAGGCGATATTGTGTTTACAAGTAAGCTCACTGATGAGGAGGCAGAATGGCTTTTAGAGACCACCCAATCCTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTCAAGGATGTCTTACAAGCACTGGATATGCCCATTTTATGATTCATGCAGAACGCAGCAGGCAATGGTGCCCTCTAAGAGGTAATAATAAGAAATTTAGCCCAACATGACAATCGTTTATAGGGCTATTATATGTAGTTCCTTGTAACTTTGAATAGGCTGTTTTGATCTGTAGAGAGAATAATCAAATCGTTCATTCTTGGTATGTTCGTATCAAATCCTTCAGTCGACAGAAATATTGATTTATGCCCATCCCAAATAATGGGAACGGAGTTTCTTTTGGATCCTGGGTTGACATTTCTTTTCACTTATGGACTGAAAAGTGGGTTGTTGGTTATTTATTCAGGATGGTTTACTATTTAAGATTTTGATGTATGAATTTGATTTTTGAGAACTACAGAGTTATAAATTTGAATGCCCA ATGCGAAGCTCTTCGTTACAGACATTGAGGACCATTGCTGGTTCTGTGAAAACTGTTATTGCCAGTTCTTCACCTGTGGTTCGGCAATCTTCTCGTTCTTATTTTGCTAATCCGAGTCTTGGGAAACTGCAAAAGGAAACTAATCCTAGTGATTTCCTCAAATGGTCTTCGCTTGGTTTCTTTCGGACTTCAAAATTCGCTACTGGGTTCAACCCATTGCAACCAAAGCCGTTGGATTCGATCATTGATATGGAGAGGGCGAAAGATCGGTCACCAGAGGACCTCGCTTCCATCTGGGATGATTATCATTTGGGAAGAGGCCATATTGGGATATCGATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGATTGCCGATACTTTGTTATTCCTTTGTGGCGTGGAAGTGGCTATACTACCATGTTTGTTCAAGTACAAACGCCGCATATCATTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACTGTGTCCTATTACAAAGAATTTGCAGAGAGCAAGGATTTGGTGCTTATTCGAGGCGATATTGTGTTTACAAGTAAGCTCACTGATGAGGAGGCAGAATGGCTTTTAGAGACCACCCAATCCTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTCAAGGATGTCTTACAAGCACTGGATATGCCCATTTTATGA MRSSSLQTLRTIAGSVKTVIASSSPVVRQSSRSYFANPSLGKLQKETNPSDFLKWSSLGFFRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHLLEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYKARGTQAAPYFTVSYYKEFAESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVLQALDMPIL* Homology
BLAST of CSPI06G35110 vs. ExPASy Swiss-Prot
Match: Q66JD1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Xenopus tropicalis OX=8364 GN=atpaf1 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16 Identity = 66/235 (28.09%), Postives = 110/235 (46.81%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy Swiss-Prot
Match: Q5TC12 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens OX=9606 GN=ATPAF1 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.7e-15 Identity = 60/219 (27.40%), Postives = 97/219 (44.29%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy Swiss-Prot
Match: Q811I0 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Mus musculus OX=10090 GN=Atpaf1 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.6e-15 Identity = 60/219 (27.40%), Postives = 96/219 (43.84%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy Swiss-Prot
Match: P87127 (Protein atp11, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp11 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.6e-10 Identity = 48/181 (26.52%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy TrEMBL
Match: A0A0A0KI74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518330 PE=3 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.2e-137 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy TrEMBL
Match: A0A1S3AZK5 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo OX=3656 GN=LOC103484474 PE=3 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.2e-132 Identity = 239/248 (96.37%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy TrEMBL
Match: A0A5A7UBA1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007940 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 3.1e-131 Identity = 238/248 (95.97%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy TrEMBL
Match: A0A6J1EJC6 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111433127 PE=3 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.4e-120 Identity = 218/248 (87.90%), Postives = 232/248 (93.55%), Query Frame = 0
BLAST of CSPI06G35110 vs. ExPASy TrEMBL
Match: A0A6J1IR42 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111478614 PE=3 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.5e-120 Identity = 216/248 (87.10%), Postives = 232/248 (93.55%), Query Frame = 0
BLAST of CSPI06G35110 vs. NCBI nr
Match: XP_004134937.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis sativus] >KGN49278.1 hypothetical protein Csa_003090 [Cucumis sativus]) HSP 1 Score: 498.0 bits (1281), Expect = 4.6e-137 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CSPI06G35110 vs. NCBI nr
Match: XP_008439782.1 (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo]) HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131 Identity = 239/248 (96.37%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of CSPI06G35110 vs. NCBI nr
Match: KAA0052644.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo var. makuwa] >TYK13182.1 ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo var. makuwa]) HSP 1 Score: 477.6 bits (1228), Expect = 6.4e-131 Identity = 238/248 (95.97%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of CSPI06G35110 vs. NCBI nr
Match: XP_038883536.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Benincasa hispida]) HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125 Identity = 226/248 (91.13%), Postives = 239/248 (96.37%), Query Frame = 0
BLAST of CSPI06G35110 vs. NCBI nr
Match: XP_022925840.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita moschata]) HSP 1 Score: 442.2 bits (1136), Expect = 3.0e-120 Identity = 218/248 (87.90%), Postives = 232/248 (93.55%), Query Frame = 0
BLAST of CSPI06G35110 vs. TAIR 10
Match: AT2G34050.1 (INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). ) HSP 1 Score: 334.3 bits (856), Expect = 8.1e-92 Identity = 159/248 (64.11%), Postives = 197/248 (79.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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