CSPI05G22560 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G22560
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	axial regulator YABBY 4
Location	Chr5: 22969397 .. 22970751 (+)
RNA-Seq Expression	CSPI05G22560
Synteny	CSPI05G22560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGACCGTGACGTGTGGCCATTGCTCGAGTCTCCTTTCTGTTAACATGATGAAAGCCACTCTGGTTCCTCTGCATTTTCTGTCTTCTTTATCTCACAATGTGGTATTTGGAAATTTTTTGTTCTTAAAATTTTGATTCAATACTCATAATTTTATATGCTGTTATAGATAACATTTCTCTTTTTTTCCTCTTTGTTCGTTCAGCCCAAAGAAACTTATAGAGAAATGAATTCAGGGAAGTTTTTTGACAGTTTCAAAAGATCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGACGACTTGATTCCTGTGACAACTCCTTTTGTAAACAAACGTAAGAACATTGACAAACAATTAGACTTCCAACATTATTAAATGAACAAATCTGAAAGTTCTAACTTAGATTATATCTTTTCTTTTGAATGATCATTTGAAGCTCCTGAGAGACGACAGCGCGCCCCATCCGCATACAACTGCTTCATCAAGTAACTTATCGAACTTTCTACTGATTTTGTAATGGATGTTTTAAAAGAATACTTTCGAATGAAAGTACATCAAGAACCAGTTTTAAGAGTGGTTCTCCTAAAACAACTTTTCAATCTAATATGTTTGTGTTTGGGACAGAGATGAAATAAGAAGGCTCAAAACTCAAAATCCTGAAATGACTCACAAAGAAGCCTTTAGAACAGCAGCAAAAAACGTAAGTAACAGTCACGATGTGTATAGATTAACTTATAAGTGTTACAAACATGTCCTTAATGATGATCTAATTAATATGTTTACTGAATCTTAAACTGATTTTGATTTTTCAGTGGGCAAATTTCCCTCCAATCCAAGAAAAGGATGACAAGGAGAAGTGTAATCAAATTGAGGAAAATGGGAGTTGGAACACTCAAATTCCTGAGGTAAAAATGCAAACTTTAGAACAAAAAGTTATGATATTCAATTAAAACTTCAAACCCATTACACCAAATGGAAAAAGTTTCATGAATCTTTATAAGTAATTACTCATAACAATATTTGAGAAGATGTCCTTTTAGACAAATTTATGAGACTGTCATTAAAGGAGTAAGAGCATTGAATGCAGAACTTATAATATAGAAGAAGTTGGGGAGTTTTTATGGCAAATTTAAGCAACTGATTTAGTGGTATACATCATAATGAGTTTATGTTTTTGAAAAAAATTTCAGGTTCATAAGGAAGGCATTCATTTTTTGACATAACTCACCATTTCAGTGAAGCTATAAGAAGGTAGGAGAATGCTTTTAGTTTCTGCTTTGTTACTTCTTTTAGGAAAAAAGGGTTCAAAAATTCAGTGTTCTTAAAAAGGATAGATGCCATTGGGAATGA

mRNA sequence

ATGGCGGTGACCGTGACGTGTGGCCATTGCTCGAGTCTCCTTTCTGTTAACATGATGAAAGCCACTCTGGTTCCTCTGCATTTTCTGTCTTCTTTATCTCACAATGTGCCCAAAGAAACTTATAGAGAAATGAATTCAGGGAAGTTTTTTGACAGTTTCAAAAGATCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGACGACTTGATTCCTGTGACAACTCCTTTTGTAAACAAACCTCCTGAGAGACGACAGCGCGCCCCATCCGCATACAACTGCTTCATCAAAGATGAAATAAGAAGGCTCAAAACTCAAAATCCTGAAATGACTCACAAAGAAGCCTTTAGAACAGCAGCAAAAAACTGGGCAAATTTCCCTCCAATCCAAGAAAAGGATGACAAGGAGAAGTGTAATCAAATTGAGGAAAATGGGAGTTGGAACACTCAAATTCCTGAGGAAAAAAGGGTTCAAAAATTCAGTGTTCTTAAAAAGGATAGATGCCATTGGGAATGA

Coding sequence (CDS)

ATGGCGGTGACCGTGACGTGTGGCCATTGCTCGAGTCTCCTTTCTGTTAACATGATGAAAGCCACTCTGGTTCCTCTGCATTTTCTGTCTTCTTTATCTCACAATGTGCCCAAAGAAACTTATAGAGAAATGAATTCAGGGAAGTTTTTTGACAGTTTCAAAAGATCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGACGACTTGATTCCTGTGACAACTCCTTTTGTAAACAAACCTCCTGAGAGACGACAGCGCGCCCCATCCGCATACAACTGCTTCATCAAAGATGAAATAAGAAGGCTCAAAACTCAAAATCCTGAAATGACTCACAAAGAAGCCTTTAGAACAGCAGCAAAAAACTGGGCAAATTTCCCTCCAATCCAAGAAAAGGATGACAAGGAGAAGTGTAATCAAATTGAGGAAAATGGGAGTTGGAACACTCAAATTCCTGAGGAAAAAAGGGTTCAAAAATTCAGTGTTCTTAAAAAGGATAGATGCCATTGGGAATGA

Protein sequence

MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKFSEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNWANFPPIQEKDDKEKCNQIEENGSWNTQIPEEKRVQKFSVLKKDRCHWE*

Homology

[Close]

BLAST of CSPI05G22560 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 6.3e-32
Identity = 87/187 (46.52%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYRE---MNSGKFFDSFKRSN 60
           M VTV CGHC+SLLSVN+MKA+ +PLH L+SLSH    ET +E      G   +++K + 
Sbjct: 44  MVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSH--LDETGKEEVAATDGVEEEAWKVNQ 103

Query: 61  LK-------FSEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMT 120
            K        S  + ED+ +      VNKPPE+RQRAPSAYNCFIK+EIRRLK QNP M 
Sbjct: 104 EKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMA 163

Query: 121 HKEAFRTAAKNWANFPPIQEK----------DDKE---KCNQIEENGSWNTQIPEEKRVQ 165
           HKEAF  AAKNWA+FPP   K          +D      CN  E++   N     E++ Q
Sbjct: 164 HKEAFSLAAKNWAHFPPAHNKRAASDQCFCEEDNNAILPCNVFEDHEESNNGF-RERKAQ 223

[Close]

BLAST of CSPI05G22560 vs. ExPASy Swiss-Prot
Match: A2PZN8 (Protein YABBY 7 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB7 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-21
Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKFSE 62
           V V CGHCS +LS     A  +P   +S+     P+E       G++ D     + +  +
Sbjct: 41  VAVQCGHCSGILS-----AVNLPPSPVSASIELTPQELDAGPPPGEYSDESSGDDREGRD 100

Query: 63  YEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNW 122
            E +D   P      NKPP R+QR PSAYNCF+K+EI+R+K+  P +THK+AF TAAKNW
Sbjct: 101 AE-DDAPAPAAAAVANKPPGRKQRTPSAYNCFVKEEIKRIKSMEPNITHKQAFSTAAKNW 160

Query: 123 ANFPPIQEKDDKEKC 138
           A+ P IQ+K  ++ C
Sbjct: 161 AHLPRIQQKRGRDSC 169

[Close]

BLAST of CSPI05G22560 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.6e-21
Identity = 62/131 (47.33%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVN---MMKATLVPLHFLSSLS-HNVP-KETYREMNSGKFFDSFKRSN 62
           VTV CGHC+SLLSVN   +++A     H   +L  HN+  +E Y E  S      + R  
Sbjct: 37  VTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYSEYGSS---SRYGRVP 96

Query: 63  LKFSEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRT 122
           + FS+ + E  L         +PPE+RQR PSAYN FIK+EIRR+K  NP+++H+EAF T
Sbjct: 97  MMFSKNDTEHMLHV-------RPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFST 156

Query: 123 AAKNWANFPPI 129
           AAKNWA+FP I
Sbjct: 157 AAKNWAHFPNI 157

[Close]

BLAST of CSPI05G22560 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.3e-20
Identity = 59/127 (46.46%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVNMMKATLVPLHFLSSLSH-NVPKETYREMNSGKFFDSFKRSNLKFS 62
           VTV CGHC++L SVNM  A       L SLS  N     Y     G    S  +   + S
Sbjct: 36  VTVRCGHCTNLWSVNMAAA-------LQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRIS 95

Query: 63  EYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKN 122
              + +  I      VN+PPE+RQR PSAYN FIK+EI+R+K  NP+++H+EAF TAAKN
Sbjct: 96  TRTITEQRI------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKN 149

Query: 123 WANFPPI 129
           WA+FP I
Sbjct: 156 WAHFPHI 149

[Close]

BLAST of CSPI05G22560 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-19
Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVNM-MKATLVPLHFLSSLSHNV--------PKETYREMNS-GKFFDS 62
           VTV CGHCS+LLSV + M+A L+P   +S+L H+         P     EM S G+  + 
Sbjct: 50  VTVRCGHCSNLLSVTVSMRALLLP--SVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINM 109

Query: 63  FKRSNLKFSEYEVEDDLIPVT--------------TPFVNKPPERRQRAPSAYNCFIKDE 122
               +   S +   + L+  T               P  N+PPE+RQR PSAYN FIK+E
Sbjct: 110 NMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEE 169

Query: 123 IRRLKTQNPEMTHKEAFRTAAKNWANFPPI 129
           I+R+K  NP+++H+EAF  AAKNWA+FP I
Sbjct: 170 IQRIKAGNPDISHREAFSAAAKNWAHFPHI 197

[Close]

BLAST of CSPI05G22560 vs. ExPASy TrEMBL
Match: A0A0A0KTN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600930 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.3e-82
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF
Sbjct: 34  MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 93

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK
Sbjct: 94  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 153

Query: 121 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPEEK 155
           NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE K
Sbjct: 154 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPEVK 187

[Close]

BLAST of CSPI05G22560 vs. ExPASy TrEMBL
Match: A0A5A7SSV9 (Axial regulator YABBY 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001120 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRS LKF
Sbjct: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSKLKF 60

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVE+DLIP TTPFVNKPPE+RQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK
Sbjct: 61  SEYEVEEDLIPATTPFVNKPPEKRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120

Query: 121 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           NWANFPPIQEKDDKEKCNQ+EENGSWNTQIPE
Sbjct: 121 NWANFPPIQEKDDKEKCNQVEENGSWNTQIPE 152

[Close]

BLAST of CSPI05G22560 vs. ExPASy TrEMBL
Match: A0A1S3BDZ8 (axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRS LKF
Sbjct: 34  MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSKLKF 93

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVE+DLIP TTPFVNKPPE+RQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK
Sbjct: 94  SEYEVEEDLIPATTPFVNKPPEKRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 153

Query: 121 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           NWANFPPIQEKDDKEKCNQ+EENGSWNTQIPE
Sbjct: 154 NWANFPPIQEKDDKEKCNQVEENGSWNTQIPE 185

[Close]

BLAST of CSPI05G22560 vs. ExPASy TrEMBL
Match: A0A6J1DDE4 (axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111019075 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.2e-64
Identity = 126/153 (82.35%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSS++ NVPKE+  EMNSGKF DSFK SNLKF
Sbjct: 34  MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSIARNVPKESGGEMNSGKFLDSFKASNLKF 93

Query: 61  SEYE-VEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAA 120
           SEYE  E  LIPVT P VNKPP +RQRAPSAYNCFIK+EIRRLK QNP+M+HKEAFRTAA
Sbjct: 94  SEYEDDEGGLIPVTPPVVNKPPAKRQRAPSAYNCFIKNEIRRLKAQNPQMSHKEAFRTAA 153

Query: 121 KNWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           KNWANFPPIQ+K+D E CNQIEENG W+TQ+PE
Sbjct: 154 KNWANFPPIQQKEDAESCNQIEENGVWDTQMPE 186

[Close]

BLAST of CSPI05G22560 vs. ExPASy TrEMBL
Match: A0A6J1JCH4 (axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-58
Identity = 123/168 (73.21%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           M VTVTCGHCSSLLSVNM++ATLVPLHFLSSLS N+PKET REM+SGK FDSF RSNLKF
Sbjct: 34  MEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRNLPKETCREMSSGKLFDSFIRSNLKF 93

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVE+ LIPVT P VNKPPE+RQR PSAYNCFIKDEIRRLK +NP+MTHKEAFRTAAK
Sbjct: 94  SEYEVEEGLIPVTPPSVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAK 153

Query: 121 NWANFPP-IQEKDDKEKCNQIEENGSWNTQIPEEKRVQKFSVLKKDRC 168
           NWANFPP IQ+K+D +           NTQIPE      F V K  +C
Sbjct: 154 NWANFPPTIQQKEDPQ-----------NTQIPE------FQVEKNGKC 184

[Close]

BLAST of CSPI05G22560 vs. NCBI nr
Match: KAE8648718.1 (hypothetical protein Csa_008048, partial [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF
Sbjct: 53  MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 112

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK
Sbjct: 113 SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 172

Query: 121 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE
Sbjct: 173 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 204

[Close]

BLAST of CSPI05G22560 vs. NCBI nr
Match: XP_004135480.2 (axial regulator YABBY 4 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF
Sbjct: 75  MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 134

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK
Sbjct: 135 SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 194

Query: 121 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE
Sbjct: 195 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 226

[Close]

BLAST of CSPI05G22560 vs. NCBI nr
Match: XP_008446193.1 (PREDICTED: axial regulator YABBY 4 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 2.3e-79
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRS LKF
Sbjct: 34  MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSKLKF 93

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVE+DLIP TTPFVNKPPE+RQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK
Sbjct: 94  SEYEVEEDLIPATTPFVNKPPEKRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 153

Query: 121 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           NWANFPPIQEKDDKEKCNQ+EENGSWNTQIPE
Sbjct: 154 NWANFPPIQEKDDKEKCNQVEENGSWNTQIPE 185

[Close]

BLAST of CSPI05G22560 vs. NCBI nr
Match: KAA0034304.1 (axial regulator YABBY 4 [Cucumis melo var. makuwa] >TYK15615.1 axial regulator YABBY 4 [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 2.3e-79
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKF 60
           MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRS LKF
Sbjct: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSKLKF 60

Query: 61  SEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120
           SEYEVE+DLIP TTPFVNKPPE+RQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK
Sbjct: 61  SEYEVEEDLIPATTPFVNKPPEKRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAK 120

Query: 121 NWANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           NWANFPPIQEKDDKEKCNQ+EENGSWNTQIPE
Sbjct: 121 NWANFPPIQEKDDKEKCNQVEENGSWNTQIPE 152

[Close]

BLAST of CSPI05G22560 vs. NCBI nr
Match: XP_038893210.1 (axial regulator YABBY 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 133/151 (88.08%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 2   AVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFDSFKRSNLKFS 61
           AVTVTCGHCSSLLSVNMMKA LVPLHFLSSLS NVPKE  REMNSGKFFDSFKRS LKFS
Sbjct: 35  AVTVTCGHCSSLLSVNMMKANLVPLHFLSSLSCNVPKEACREMNSGKFFDSFKRSKLKFS 94

Query: 62  EYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKN 121
           EYEVE+ LIPVT PFVNKPPE+RQRAPSAYNCFIKDEIRRLK QNPEMTHKEAFRTAAKN
Sbjct: 95  EYEVEEGLIPVTPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAQNPEMTHKEAFRTAAKN 154

Query: 122 WANFPPIQEKDDKEKCNQIEENGSWNTQIPE 153
           WANFPPI EK+D   CN  EENG+WNTQIPE
Sbjct: 155 WANFPPIHEKEDTMGCN--EENGTWNTQIPE 183

[Close]

BLAST of CSPI05G22560 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-33
Identity = 87/187 (46.52%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 1   MAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYRE---MNSGKFFDSFKRSN 60
           M VTV CGHC+SLLSVN+MKA+ +PLH L+SLSH    ET +E      G   +++K + 
Sbjct: 44  MVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSH--LDETGKEEVAATDGVEEEAWKVNQ 103

Query: 61  LK-------FSEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMT 120
            K        S  + ED+ +      VNKPPE+RQRAPSAYNCFIK+EIRRLK QNP M 
Sbjct: 104 EKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMA 163

Query: 121 HKEAFRTAAKNWANFPPIQEK----------DDKE---KCNQIEENGSWNTQIPEEKRVQ 165
           HKEAF  AAKNWA+FPP   K          +D      CN  E++   N     E++ Q
Sbjct: 164 HKEAFSLAAKNWAHFPPAHNKRAASDQCFCEEDNNAILPCNVFEDHEESNNGF-RERKAQ 223

[Close]

BLAST of CSPI05G22560 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21
Identity = 59/127 (46.46%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVNMMKATLVPLHFLSSLSH-NVPKETYREMNSGKFFDSFKRSNLKFS 62
           VTV CGHC++L SVNM  A       L SLS  N     Y     G    S  +   + S
Sbjct: 36  VTVRCGHCTNLWSVNMAAA-------LQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRIS 95

Query: 63  EYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKN 122
              + +  I      VN+PPE+RQR PSAYN FIK+EI+R+K  NP+++H+EAF TAAKN
Sbjct: 96  TRTITEQRI------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKN 149

Query: 123 WANFPPI 129
           WA+FP I
Sbjct: 156 WAHFPHI 149

[Close]

BLAST of CSPI05G22560 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21
Identity = 59/127 (46.46%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVNMMKATLVPLHFLSSLSH-NVPKETYREMNSGKFFDSFKRSNLKFS 62
           VTV CGHC++L SVNM  A       L SLS  N     Y     G    S  +   + S
Sbjct: 36  VTVRCGHCTNLWSVNMAAA-------LQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRIS 95

Query: 63  EYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKN 122
              + +  I      VN+PPE+RQR PSAYN FIK+EI+R+K  NP+++H+EAF TAAKN
Sbjct: 96  TRTITEQRI------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKN 149

Query: 123 WANFPPI 129
           WA+FP I
Sbjct: 156 WAHFPHI 149

[Close]

BLAST of CSPI05G22560 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-20
Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVNM-MKATLVPLHFLSSLSHNV--------PKETYREMNS-GKFFDS 62
           VTV CGHCS+LLSV + M+A L+P   +S+L H+         P     EM S G+  + 
Sbjct: 50  VTVRCGHCSNLLSVTVSMRALLLP--SVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINM 109

Query: 63  FKRSNLKFSEYEVEDDLIPVT--------------TPFVNKPPERRQRAPSAYNCFIKDE 122
               +   S +   + L+  T               P  N+PPE+RQR PSAYN FIK+E
Sbjct: 110 NMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEE 169

Query: 123 IRRLKTQNPEMTHKEAFRTAAKNWANFPPI 129
           I+R+K  NP+++H+EAF  AAKNWA+FP I
Sbjct: 170 IQRIKAGNPDISHREAFSAAAKNWAHFPHI 197

[Close]

BLAST of CSPI05G22560 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-20
Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 3   VTVTCGHCSSLLSVNM-MKATLVPLHFLSSLSHNV--------PKETYREMNS-GKFFDS 62
           VTV CGHCS+LLSV + M+A L+P   +S+L H+         P     EM S G+  + 
Sbjct: 19  VTVRCGHCSNLLSVTVSMRALLLP--SVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINM 78

Query: 63  FKRSNLKFSEYEVEDDLIPVT--------------TPFVNKPPERRQRAPSAYNCFIKDE 122
               +   S +   + L+  T               P  N+PPE+RQR PSAYN FIK+E
Sbjct: 79  NMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEE 138

Query: 123 IRRLKTQNPEMTHKEAFRTAAKNWANFPPI 129
           I+R+K  NP+++H+EAF  AAKNWA+FP I
Sbjct: 139 IQRIKAGNPDISHREAFSAAAKNWAHFPHI 166

The following BLAST results are available for this feature:

BLAST of CSPI05G22560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	6.3e-32	46.52	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
A2PZN8	2.3e-21	41.48	Protein YABBY 7 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB7 PE=2 SV=1	[more]
Q10FZ7	8.6e-21	47.33	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]
Q8GW46	4.3e-20	46.46	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q9XFB1	2.8e-19	41.33	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]

BLAST of CSPI05G22560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTN4	5.3e-82	99.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600930 PE=3 SV=1	[more]
A0A5A7SSV9	1.1e-79	96.71	Axial regulator YABBY 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BDZ8	1.1e-79	96.71	axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1	[more]
A0A6J1DDE4	2.2e-64	82.35	axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111019075 PE=3...	[more]
A0A6J1JCH4	1.4e-58	73.21	axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]

BLAST of CSPI05G22560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648718.1	1.9e-81	100.00	hypothetical protein Csa_008048, partial [Cucumis sativus]	[more]
XP_004135480.2	1.9e-81	100.00	axial regulator YABBY 4 [Cucumis sativus]	[more]
XP_008446193.1	2.3e-79	96.71	PREDICTED: axial regulator YABBY 4 [Cucumis melo]	[more]
KAA0034304.1	2.3e-79	96.71	axial regulator YABBY 4 [Cucumis melo var. makuwa] >TYK15615.1 axial regulator Y...	[more]
XP_038893210.1	1.2e-67	88.08	axial regulator YABBY 4 isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI05G22560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	4.5e-33	46.52	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	3.0e-21	46.46	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	3.0e-21	46.46	plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	2.0e-20	41.33	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.2	2.0e-20	41.33	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 2..129 e-value: 1.1E-41 score: 143.2
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..149
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 76..160 e-value: 4.4E-8 score: 35.3
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 72..127
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 1..149
None	No IPR available	CDD	cd00084	HMG-box	coord: 86..136 e-value: 7.70275E-4 score: 34.5168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G22560.1	CSPI05G22560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development