Bhi08G000965 (gene) Wax gourd (B227) v1

Overview


Name	Bhi08G000965
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr8: 36267996 .. 36272111 (+)
RNA-Seq Expression	Bhi08G000965
Synteny	Bhi08G000965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGATAAGGCTCTTTTGTTCCTATTGGTTCATCCAAAAATTCATAAAACTCGTCGTAGCCATTTGATCCTAAAGTTTATTGCTTTCTAACCCTTGATTTCCGACAAACAAATGAACATCATAATCTTAAATGCCATTACAATGCCATGCCCAAAATACACTTCTTGAACTCAAACCAAAACCAGGTTTTCTTCTACCACCATTCTTGCTGAAAAAATGGCAACTGTCATGACCCAGGCTTCGGCCTCTGTCTTCCGGCCATGCACTTTGAGATCGAGGTTTCTTTCGCGGACTTCGGGAAAGTTTAACAGAGGTTTGTCTGTTAAGCCAACAACTTCTTCAGTTCCTAATTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTGCCAGGTTTGCCATCGCCAGCTTACCTTGATGGAAGGTATAAATTATTTCAAACATATATAAGAGATCTGGAAATGGAGATGTGAATTAAACAATCAACTTAAACATTTCTGTTCGCAGTCTGCCAGGTGACAATGGTTTTGATCCTCTGGGACTTGCAGAGGATCCTGAAAACTTGAGGTGGTATGTGCAAGCCGAGCTCGTGAATGGCCGATGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTCGGAATCATCAACGTACCGAAATGGTACGATGCAGGGAAAGCTGAGTATTTCGCATCATCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAACCCGGGAAGTGTAAACCAAGATCCAATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTCGAGGCCAAGGAAAAGGAGATTGCTAATGGTAAATGTCTTTGGAACAAACTAGCTAATCAAATTCCTCACTTATTACATGTATAATAATGTAGCTAATCAACTTTTGATGATCTCTGTAGGTAGACTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAGGACAATAAAATATGTGCAATATTGTGTGATCTGTGTGATTGTAGACATGGGAACTATCATTGTACAGGATGGTAGCAGTTATATAAATGTAGTATAAAAGTATGCAACTTGGTTTAACTGAGAAAGAAAGATTGTAATCATGCCGACTTCTTTAATTTTCTCGAAATATGATATAAGAAGTATGAAATTTGCGTCCATGTTTTACAAAGCTCAATGTACAGCTAAGGAAACCAGAAAACCCCAAATATTTTACAGCTCTTCCATGAGGAGGGAAAGGGAAAAAAAAGAAAATCTAACCTAAAACACCAACCTCTGATCTCGTATATATTGTATTTACAAGTCGAGGATATTGGTTAAACGGCAAAATGAGGAGCGAAGATCATTCTGATCTCATTATATATCGAATACTTTTGACTGGCAATTGGGAGAAGGATGCTATCCCAACAAAAATGCTGACCACATCATTCATCAATCAAGAGGAACATTTCTTCAATCTGTTACCCGTCCAATTACTGGTGAAATTCGATTGGAATCAATTTGGCTGCTGCAAGAGATGACAAAATCATTAATGAATTGAAACAACAAGGGAAGAGCTCATATCAAAATAATAGAGGGTAAGGAATTGATAACTGTGTATTGGGTTTATGCTAGGTAAATTATAATACAAAACTTTGGAGCTGCAAAGTTTGAAATCAAACAAGATAGAGGATATGCAACATTCATTGTTTTGGTGCATATGAATACCAATAGCTTGTATTCATTAAACAAAGATAGAAAATTAATGCTTTAACACAATTTTAAAGTTTTAGAACTACAAATATGGACAAAAAGTGTAAATGGACTACACTAAGTTTTAGAAGGACCAGTTAAAAGAGAACCTACATGGTGATATGCATTGCTTTGGTACATTGGAATGCTACAAGGCCCTGGTATAGCAACCCATGGATGCTGGTCATCGTCATATAGAGATCTAGAGAGCTCCAACTTTCCATTTAGTTGAGTGTCCACACAAGTTGCATGCAAGTTCATCTCCATCTCTATTTTCAGTCTCTTTTCATCTTGGAAGCTGGAACCATCACATGTAGGGTATGGATATTGATCACCAAGTTGCAATGTTGAGCAAGAAGTTCCACTTAATTCATTTAATGCCCCATCACCTTGTGGCATGCTATCAACATGACCGGAGATTCCAGCTTCAATTTTCCCAGGGTTGAAGAAACTAGGATAGCTTGGAAATGAGCATTCAACATCACTGCAGACATTCCCCAGTATAAATTCTAGGGCATATAATCACCCACATAAACTGAGATATAATACAGCATTTTCTGACTTTTGTCAGCCGAAAACTATTTTATTTAATCACACTACACACATTAGACATTACATATATTGATTATAAAAACCAGATATTCGCATTAATCTCATCCATTTAAGGCTCACCCTGGTTGCAGAAAGCTAGGCTCATTTGGTAAAGTAATCTGTTGAGTGCCATAGTTGGGAAGCCATAACAGGGGTTGAGTACTTTGCATTTCGTCCATTAACAAAGGTAAGGACATCCCACCACCCGAATACTGTGGTAAATGAAAATATGTTGACTGTGTCAAGACACACAACATAAGCATGCTTGTAAAAATGAATAGGAAAGGTATTGCTCTTACCTGGCCCGTGAAGTCCTGTGAGAGTAGTTGTTGTCTTCTTAAATTTTCCTGTCAAATTTCAGAACCTGTTTTAAGTACCAGCAGCAACTTCTATAAACAAATAACATAGAATCTTGAAAATAATATATAACATGGAAAAGCCCATCCTCTGTCCTCAATAAAATAAGTTACCAATGCCAGAATGATGCAGCCCATGTGTTTTGATATAAGTATCAAGCCAAAAGATAAATAAAACATATCCTTAGACCAGAGGGATGAAATCATGGACAAAAACAATCGTTTTGATATATGCAACTATAACACATGTAACATACCTTGTGTAGACGTGTCTGGTTTAAGGACTCCCTTATTAGATCTTCCATCTGCTGGAGCTGCTCCATATTGTTGATACTATCAGGATTCCTCCAATAGCTGAAGGGATAAGACGAACACTAGAAAATCAACATACAACCAGAATGATGTCCATGCCTGACACTAATGACTAAACATGCATATGCTCGTGCCAATAGCAACAGCCCCTAAGCAATTGGACTTCTCTTTGGCTCACAAACTTGTGGTTTCAGATTCTATCACTTCCGTCCAATTCTACTATCATCCGCCATATTCCTATTTACACCCCCACCTCTACTCCTCTAGCTGAACCTCTGCTTGTAATAAACATTGACCAAGAATTTTATGGATAAAGAAAAGCATTTACATGTAACATTTTATCATAGGCTATAATAAAATAACACGTTGAAATGATTGGAGCCCTTTTCTTTAGTTTGGCTTCATTTGGTAGTTGGGTTTGTTCCTATGTCCCTTGTATTCTTTCATTTTTTTTCCTCAATGAAAGTTGAGTTGAAATGAAAAAAGGCCCAAAAAAAAGTAAGGGCTATATACTTTAAAAATAAAAGCTCCAAAGGTGCACCTCAGTCTCTTATGTGCTTCGCCAATCTGATCTCGCAATATGGTAACTTCATTGGTCAATTCCTGCTGATAAATTATACGAAATTAATAAAATGCACAAAACCAGTCTCGTTTTATGAGAACCAAAGAAAAAGAAAAAAAGCTCGGTACCTCAAAATCTTGAGAGCTGCAAGATATTGCAGGACAGGAGAAAAATGAAAAAGAAAGTCAGATCTATTGTAATCGTCTTGAAATTCAGACAGAACAGTTGAATATATATTTGACGGATATAAACAAATACCTTGAACCCACAAAATCTTTTATGTTAACATCGTGGTCTAACTTCTTAAATGTTTTCTTCAACACCTATATGCTCGAATGGAACATACAACAAATAAGTACACTTTGTATACAAGAGATGAG

mRNA sequence

AAAGGATAAGGCTCTTTTGTTCCTATTGGTTCATCCAAAAATTCATAAAACTCGTCGTAGCCATTTGATCCTAAAGTTTATTGCTTTCTAACCCTTGATTTCCGACAAACAAATGAACATCATAATCTTAAATGCCATTACAATGCCATGCCCAAAATACACTTCTTGAACTCAAACCAAAACCAGGTTTTCTTCTACCACCATTCTTGCTGAAAAAATGGCAACTGTCATGACCCAGGCTTCGGCCTCTGTCTTCCGGCCATGCACTTTGAGATCGAGGTTTCTTTCGCGGACTTCGGGAAAGTTTAACAGAGGTTTGTCTGTTAAGCCAACAACTTCTTCAGTTCCTAATTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTGCCAGGTTTGCCATCGCCAGCTTACCTTGATGGAAGTCTGCCAGGTGACAATGGTTTTGATCCTCTGGGACTTGCAGAGGATCCTGAAAACTTGAGGTGGTATGTGCAAGCCGAGCTCGTGAATGGCCGATGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTCGGAATCATCAACGTACCGAAATGGTACGATGCAGGGAAAGCTGAGTATTTCGCATCATCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAACCCGGGAAGTGTAAACCAAGATCCAATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTCGAGGCCAAGGAAAAGGAGATTGCTAATGGTAGACTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAGGACAATAAAATATGTGCAATATTGTGTGATCTGTGTGATTGTAGACATGGGAACTATCATTGTACAGGATGGTAGCAGTTATATAAATGTAGTATAAAAGTATGCAACTTGGTTTAACTGAGAAAGAAAGATTGTAATCATGCCGACTTCTTTAATTTTCTCGAAATATGATATAAGAAGTATGAAATTTGCGTCCATGTTTTACAAAGCTCAATGTACAGCTAAGGAAACCAGAAAACCCCAAATATTTTACAGCTCTTCCATGAGGAGGGAAAGGGAAAAAAAAGAAAATCTAACCTAAAACACCAACCTCTGATCTCGTATATATTGTATTTACAAGTCGAGGATATTGGTTAAACGGCAAAATGAGGAGCGAAGATCATTCTGATCTCATTATATATCGAATACTTTTGACTGGCAATTGGGAGAAGGATGCTATCCCAACAAAAATGCTGACCACATCATTCATCAATCAAGAGGAACATTTCTTCAATCTGTTACCCGTCCAATTACTGGTGAAATTCGATTGGAATCAATTTGGCTGCTGCAAGAGATGACAAAATCATTAATGAATTGAAACAACAAGGGAAGAGCTCATATCAAAATAATAGAGGGTAAGGAATTGATAACTGTGTATTGGGTTTATGCTAGGTAAATTATAATACAAAACTTTGGAGCTGCAAAGTTTGAAATCAAACAAGATAGAGGATATGCAACATTCATTGTTTTGGTGCATATGAATACCAATAGCTTGTATTCATTAAACAAAGATAGAAAATTAATGCTTTAACACAATTTTAAAGTTTTAGAACTACAAATATGGACAAAAAGTGTAAATGGACTACACTAAGTTTTAGAAGGACCAGTTAAAAGAGAACCTACATGGTGATATGCATTGCTTTGGTACATTGGAATGCTACAAGGCCCTGGTATAGCAACCCATGGATGCTGGTCATCGTCATATAGAGATCTAGAGAGCTCCAACTTTCCATTTAGTTGAGTGTCCACACAAGTTGCATGCAAGTTCATCTCCATCTCTATTTTCAGTCTCTTTTCATCTTGGAAGCTGGAACCATCACATGTAGGGTATGGATATTGATCACCAAGTTGCAATGTTGAGCAAGAAGTTCCACTTAATTCATTTAATGCCCCATCACCTTGTGGCATGCTATCAACATGACCGGAGATTCCAGCTTCAATTTTCCCAGGGTTGAAGAAACTAGGATAGCTTGGAAATGAGCATTCAACATCACTGCAGACATTCCCCAGTATAAATTCTAGGGCATATAATCACCCACATAAACTGAGATATAATACAGCATTTTCTGACTTTTGTCAGCCGAAAACTATTTTATTTAATCACACTACACACATTAGACATTACATATATTGATTATAAAAACCAGATATTCGCATTAATCTCATCCATTTAAGGCTCACCCTGGTTGCAGAAAGCTAGGCTCATTTGGTAAAGTAATCTGTTGAGTGCCATAGTTGGGAAGCCATAACAGGGGTTGAGTACTTTGCATTTCGTCCATTAACAAAGGTAAGGACATCCCACCACCCGAATACTGTGGTAAATGAAAATATGTTGACTGTGTCAAGACACACAACATAAGCATGCTTGTAAAAATGAATAGGAAAGGTATTGCTCTTACCTGGCCCGTGAAGTCCTGTGAGAGTAGTTGTTGTCTTCTTAAATTTTCCTGTCAAATTTCAGAACCTGTTTTAAGTACCAGCAGCAACTTCTATAAACAAATAACATAGAATCTTGAAAATAATATATAACATGGAAAAGCCCATCCTCTGTCCTCAATAAAATAAGTTACCAATGCCAGAATGATGCAGCCCATGTGTTTTGATATAAGTATCAAGCCAAAAGATAAATAAAACATATCCTTAGACCAGAGGGATGAAATCATGGACAAAAACAATCGTTTTGATATATGCAACTATAACACATGTAACATACCTTGTGTAGACGTGTCTGGTTTAAGGACTCCCTTATTAGATCTTCCATCTGCTGGAGCTGCTCCATATTGTTGATACTATCAGGATTCCTCCAATAGCTGAAGGGATAAGACGAACACTAGAAAATCAACATACAACCAGAATGATGTCCATGCCTGACACTAATGACTAAACATGCATATGCTCGTGCCAATAGCAACAGCCCCTAAGCAATTGGACTTCTCTTTGGCTCACAAACTTGTGGTTTCAGATTCTATCACTTCCGTCCAATTCTACTATCATCCGCCATATTCCTATTTACACCCCCACCTCTACTCCTCTAGCTGAACCTCTGCTTGTAATAAACATTGACCAAGAATTTTATGGATAAAGAAAAGCATTTACATGTAACATTTTATCATAGGCTATAATAAAATAACACGTTGAAATGATTGGAGCCCTTTTCTTTAGTTTGGCTTCATTTGGTAGTTGGGTTTGTTCCTATGTCCCTTGTATTCTTTCATTTTTTTTCCTCAATGAAAGTTGAGTTGAAATGAAAAAAGGCCCAAAAAAAAGTAAGGGCTATATACTTTAAAAATAAAAGCTCCAAAGGTGCACCTCAGTCTCTTATGTGCTTCGCCAATCTGATCTCGCAATATGGTAACTTCATTGGTCAATTCCTGCTGATAAATTATACGAAATTAATAAAATGCACAAAACCAGTCTCGTTTTATGAGAACCAAAGAAAAAGAAAAAAAGCTCGGTACCTCAAAATCTTGAGAGCTGCAAGATATTGCAGGACAGGAGAAAAATGAAAAAGAAAGTCAGATCTATTGTAATCGTCTTGAAATTCAGACAGAACAGTTGAATATATATTTGACGGATATAAACAAATACCTTGAACCCACAAAATCTTTTATGTTAACATCGTGGTCTAACTTCTTAAATGTTTTCTTCAACACCTATATGCTCGAATGGAACATACAACAAATAAGTACACTTTGTATACAAGAGATGAG

Coding sequence (CDS)

ATGGCAACTGTCATGACCCAGGCTTCGGCCTCTGTCTTCCGGCCATGCACTTTGAGATCGAGGTTTCTTTCGCGGACTTCGGGAAAGTTTAACAGAGGTTTGTCTGTTAAGCCAACAACTTCTTCAGTTCCTAATTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTGCCAGGTTTGCCATCGCCAGCTTACCTTGATGGAAGTCTGCCAGGTGACAATGGTTTTGATCCTCTGGGACTTGCAGAGGATCCTGAAAACTTGAGGTGGTATGTGCAAGCCGAGCTCGTGAATGGCCGATGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTCGGAATCATCAACGTACCGAAATGGTACGATGCAGGGAAAGCTGAGTATTTCGCATCATCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAACCCGGGAAGTGTAAACCAAGATCCAATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATACCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTCGAGGCCAAGGAAAAGGAGATTGCTAATGGTAGACTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCATGGCACAACACTATAGTTCAAACACTAAGGGGATAG

Protein sequence

MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTLRG

Homology

[Close]

BLAST of Bhi08G000965 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 435.3 bits (1118), Expect = 3.4e-122
Identity = 207/249 (83.13%), Postives = 222/249 (89.16%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSV-PNSFKVEAKKGEWLPG 60
           MATV T ASAS+FRPCT + RFL+ +SG+ NR LS     SS   +SFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGMLLPEVFT  G
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD 240
            +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIVQT 249
           PWHNTIVQT
Sbjct: 241 PWHNTIVQT 249

[Close]

BLAST of Bhi08G000965 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 232.6 bits (592), Expect = 3.4e-61
Identity = 109/196 (55.61%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 56  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVF 115
           W PG   P +LDGSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  
Sbjct: 55  WFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFL 114

Query: 116 TSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 175
           T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F   
Sbjct: 115 TKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNN 174

Query: 176 SLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGP 235
            L   DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP
Sbjct: 175 KLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 234

Query: 236 FDNFLQHISDPWHNTI 246
            DN   H++DP H TI
Sbjct: 235 IDNLFAHLADPGHATI 250

[Close]

BLAST of Bhi08G000965 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-57
Identity = 107/210 (50.95%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 49  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAG 108
           V  ++  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG
Sbjct: 42  VAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAG 101

Query: 109 MLLPEVFTSFGIINVPKWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 168
           +L  ++  + GI N+P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  
Sbjct: 102 ILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQA 161

Query: 169 QDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFI 228
           ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF 
Sbjct: 162 KEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFF 221

Query: 229 VQHNVTGKGPFDNFLQHISDPWHNTIVQTL 250
           VQ +VT  GP DN ++H+S+PWH TI+QTL
Sbjct: 222 VQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of Bhi08G000965 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-57
Identity = 107/210 (50.95%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 49  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAG 108
           V  ++  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG
Sbjct: 42  VAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAG 101

Query: 109 MLLPEVFTSFGIINVPKWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 168
           +L  ++  + GI N+P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  
Sbjct: 102 ILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQA 161

Query: 169 QDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFI 228
           ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF 
Sbjct: 162 KEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFF 221

Query: 229 VQHNVTGKGPFDNFLQHISDPWHNTIVQTL 250
           VQ +VT  GP DN ++H+S+PWH TI+QTL
Sbjct: 222 VQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of Bhi08G000965 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-54
Identity = 96/193 (49.74%), Postives = 122/193 (63.21%), Query Frame = 0


Query: 56  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVF 115
           W PG   P +LDGSLPGD GFDPLGL  DP+ L+W+ QAEL++ RWAML V G+++PE  
Sbjct: 68  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECL 127

Query: 116 TSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 175
              G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +   
Sbjct: 128 ERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHK 187

Query: 176 SLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGP 235
             P  DVGYPGG++           EP +  + KEI NGRLAMLAFLGF  Q   T + P
Sbjct: 188 VNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDP 247

Query: 236 FDNFLQHISDPWH 243
            +N + H++DP H
Sbjct: 248 IENLMAHLADPGH 260

[Close]

BLAST of Bhi08G000965 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.3e-126
Identity = 216/251 (86.06%), Postives = 226/251 (90.04%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGL 60
           MATV TQASA++F PC L+SRFL  +SGK NRG++ +P   S   SFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
            SP YL GSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           +VGYPGGIFNPLNF PTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDN LQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240

Query: 241 WHNTIVQTLRG 252
           WHNTIVQTL G
Sbjct: 241 WHNTIVQTLGG 251

[Close]

BLAST of Bhi08G000965 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 4.8e-121
Identity = 207/249 (83.13%), Postives = 222/249 (89.16%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSV-PNSFKVEAKKGEWLPG 60
           MATV T ASAS+FRPCT + RFL+ +SG+ NR LS     SS   +SFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGMLLPEVFT  G
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISD 240
            +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240

Query: 241 PWHNTIVQT 249
           PWHNTIVQT
Sbjct: 241 PWHNTIVQT 249

[Close]

BLAST of Bhi08G000965 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.5e-87
Identity = 153/227 (67.40%), Postives = 177/227 (77.97%), Query Frame = 0


Query: 29  KFNRGLSVKPTTSSVPNSFKVEA---KKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDP 88
           +F   +   P  S  P S + +     KG WLPGL SPAYLDGSL GDNGFDPL LAEDP
Sbjct: 6   RFRTRVPPSPAASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDP 65

Query: 89  ENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYD-AGKAEYFASSSTLFVI 148
           E+LRW+VQA++VNGRWAMLGVAGML+PEV T  G++N P+W    GK  YFASSST   +
Sbjct: 66  EDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRV 125

Query: 149 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKE 208
             +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE KEKE
Sbjct: 126 H-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAP-LENKEKE 185

Query: 209 IANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTLRG 252
           +ANGRLAMLAFLGF+VQHNV GKGPF+N  QH++DPWHNTI+QT+ G
Sbjct: 186 LANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230

[Close]

BLAST of Bhi08G000965 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-60
Identity = 110/196 (56.12%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 56  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVF 115
           W PG   P +LDGSLPGD GFDPLGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE+ 
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 116 TSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 175
           T  GI+N P WY AG+ EYF  ++TLF++E +L  + E RRW DI  PG VN DPIF   
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNN 187

Query: 176 SLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGP 235
            L   DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP
Sbjct: 188 KLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247

Query: 236 FDNFLQHISDPWHNTI 246
            DN   H++DP H TI
Sbjct: 248 IDNLFAHLADPGHATI 263

[Close]

BLAST of Bhi08G000965 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.7e-60
Identity = 109/196 (55.61%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 56  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVF 115
           W PG   P +LDGSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  
Sbjct: 55  WFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFL 114

Query: 116 TSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 175
           T  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F   
Sbjct: 115 TKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNN 174

Query: 176 SLPPNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGP 235
            L   DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP
Sbjct: 175 KLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 234

Query: 236 FDNFLQHISDPWHNTI 246
            DN   H++DP H TI
Sbjct: 235 IDNLFAHLADPGHATI 250

[Close]

BLAST of Bhi08G000965 vs. ExPASy TrEMBL
Match: A0A0A0LTE5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G033310 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.2e-137
Identity = 233/250 (93.20%), Postives = 243/250 (97.20%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGL 60
           MATV+TQASA+VFRPC  RSRFLS +SGKFNR LSVKPTTSS+PN+FKVEAKKGEWLPGL
Sbjct: 1   MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGRWAMLGVAGM+LPEV T++GI
Sbjct: 61  PSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEA+EKEIANGRLAMLAFLGFIVQHNVTGKGPFDNF+QHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAREKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFMQHISDP 240

Query: 241 WHNTIVQTLR 251
           WHNTIVQTLR
Sbjct: 241 WHNTIVQTLR 250

[Close]

BLAST of Bhi08G000965 vs. ExPASy TrEMBL
Match: A0A6J1GBT1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452545 PE=3 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.0e-137
Identity = 236/251 (94.02%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGL 60
           M+ VM QASA+VFRP   RSRFL  +SGKFNR LSVKPTTS VP+SFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLLGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTS+GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIVQTLRG 252
           WHNTIVQTLRG
Sbjct: 241 WHNTIVQTLRG 251

[Close]

BLAST of Bhi08G000965 vs. ExPASy TrEMBL
Match: A0A6J1KDI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493358 PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.5e-137
Identity = 236/251 (94.02%), Postives = 242/251 (96.41%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGL 60
           M+ VM QASA+VFRP   RSRFLS +SGKFNR LSVKPTTS VP+SFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSNGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIVQTLRG 252
           WHNT+VQTLRG
Sbjct: 241 WHNTVVQTLRG 251

[Close]

BLAST of Bhi08G000965 vs. ExPASy TrEMBL
Match: A0A6J1C5V9 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008702 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.5e-137
Identity = 236/251 (94.02%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGL 60
           MAT MTQASA+VFRPC  RSRFLS +SGKFNR LSVKPT SS+P  FKVEAKKGEWLPGL
Sbjct: 1   MATAMTQASAAVFRPCASRSRFLSGSSGKFNRALSVKPTASSLPCYFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKXYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240

Query: 241 WHNTIVQTLRG 252
           WHNTI+QTLRG
Sbjct: 241 WHNTIIQTLRG 251

[Close]

BLAST of Bhi08G000965 vs. ExPASy TrEMBL
Match: A0A2C9VP65 (Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=MANES_06G091400 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 220/251 (87.65%), Postives = 235/251 (93.63%), Query Frame = 0


Query: 1   MATVMTQASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGL 60
           MATV+TQASA+VFRPC  RSRFL+ +S K NR +S+KP  SS   SFKVEAKKGEWLPGL
Sbjct: 1   MATVITQASAAVFRPCASRSRFLTGSSSKLNREVSLKPMLSSPAASFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGI 120
           PSPAYL+GSLPGDNGFDPLGLAEDPENL+WY+QAELVNGRWAMLGVAGMLLPEVFT  G+
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLKWYIQAELVNGRWAMLGVAGMLLPEVFTKIGV 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVP+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPQWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDP 240
           +VGYPGGIFNPLNF PTLEAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFDN LQH+SDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFDNLLQHLSDP 240

Query: 241 WHNTIVQTLRG 252
           WHNTIVQTLRG
Sbjct: 241 WHNTIVQTLRG 251

The following BLAST results are available for this feature:

BLAST of Bhi08G000965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47470.1	3.4e-122	83.13	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	3.4e-61	55.61	photosystem I light harvesting complex gene 2	[more]
AT1G45474.1	1.7e-57	50.95	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	1.7e-57	50.95	photosystem I light harvesting complex gene 5	[more]
AT1G19150.1	1.8e-54	49.74	photosystem I light harvesting complex gene 6	[more]

BLAST of Bhi08G000965 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQL2	1.3e-126	86.06	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	4.8e-121	83.13	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q36718	4.5e-87	67.40	Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga...	[more]
P10708	2.8e-60	56.12	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
Q9SYW8	4.7e-60	55.61	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]

BLAST of Bhi08G000965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTE5	2.2e-137	93.20	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1GBT1	5.0e-137	94.02	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KDI3	6.5e-137	94.02	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1C5V9	8.5e-137	94.02	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A2C9VP65	1.7e-129	87.65	Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=M...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 63..242 e-value: 2.0E-67 score: 228.7
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..222 e-value: 1.6E-49 score: 168.5
None	No IPR available	PANTHER	PTHR21649:SF109	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 1..251
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 53..249
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000965	Bhi08M000965	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009409	response to cold
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009645	response to low light intensity stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding