Bhi02G001712 (gene) Wax gourd (B227) v1

Overview


Name	Bhi02G001712
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	60S ribosomal protein L18
Location	chr2: 56263538 .. 56265334 (-)
RNA-Seq Expression	Bhi02G001712
Synteny	Bhi02G001712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGATCGATCTCGTTGCAGGAGGAAAGAGTAAGAAGACCAAGAGACTGCACCCAAATCAGATGATATCTACCTAAACTTACTCGTCAAGTTACTTATTAACCGAGATTTCTCTTTCAAATTCAGTTTTGTTTGATCTATTGGTGCTTAAATATGCTCGAATGTTTAAGGGTTGAAAACCGATTTTGAAATGTCAATCGGTTGGTTTATTGGATTTCTGAAAACGGAGTTCCGCACCGTCCTCACATTTGATGAACCTTCAACTTTTTATTTTCTTCTCTCTGCGTTGCGCTTGTCAGATCTGTTTTAAATTGCTAAGCAGTTTGTAAATGCCTATTTTTTCTCCAATGAATTGGTCTTGATGGCTGGTCTTTTTGCTTTGATGATGTTTAATAATCCCAGCTCGATGAGATCTTTTGTAGGTCGGGGAATAGTCTTATTCATTAAATATCTGAGCTTAAAGTCCAGCTTTAGAGTCTTTTCTGGATTGTCTTCTACTGCTGATGTAAATTATTGAATTTACTTCGAATTGGTTACTGTGCACCCAATTGTTAGTTCACTCGTTAACTGCATTTGCTCTTCTCCTTCTAGTTTTTGAAGATATATAAAATGCTGTGTTACCTACATTATATCCCCTTTTTGGATAGGGAATACAGACATACACCGATAAGCATAAGCTATACTTGGCTTTTTTTTTTTCCATGTGTTTGGACGGAAAAAATGTTCCCAGTGAATTGTTAACCTGACCATGCTAATGCTGACATTTTGTGATTAAACTTTTCTTTAATTTTTCTGAGGGAACTGGCTCCAAAGATTTCGAGTTTTTGTGGCTCATTGGCATGTCTGCTTTAGAGCGAGTGGTTATGCATCTTCCGACTTCTAAAACTTAGGTCCCATTTGGTGACCTTTTGGTTTTTTTGTTTTTGAAAATTAAGCTTATGCTTTTTCCATTTCTTACAATGATTTGGAATAGTCATATTCTGGAGGTGGAGGTACCAGTGTCTATAGGACTATTTCTTAAGAACAAAAAGCTAAAAACGAAATAGTTATCAAATGAGACCTTAAATTTTATGCTTTTTAGTTTTCACTCTATCCTGGAATCTTCTAATTTTTTTCTGTTTGTGTGCAATTTGGTTATGAACTTCGTGTATATGTCAGTTAAACTGGTCATGCTGGGAGTAGAAGCTTATTGCACGTGCATTTACTTGAATAAAGTCGTTCTGTTTGCCTGCTTACACACTTACAATGTTGTGATTCTCAAGCGCTTATTTATGAGCAAGGTTAACAAGCCTCCACTTTCGCTTTCTAGGCTTATCCATTTCATGAAAGGAAAGGTTGGTTAAATTGTGTAGTATTCTAATAGGAAAGTAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCATGTCTTTGAAGTCCCAGCATTGGAAGTTGCAGCTCTGGTGTATACTGAGACAGCCAGGGCAAGGATCGAAAAGGCTGGCAGGAAATGTTCGACATTTGACCAAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGGTATGAATGTTTTCATTTTTTTTTAGAATTTGCTGGATTGTCTTTTCCATGTACAATGATTTACTGGTGTTTTAGGGGTCTGAATCATCCATTGGCTCCATCTGCACTTTGAGGTCCTAAGAACTCTCGGGAGGCAGTGAAGCATTTCGGTCCTGCACCGGGTGTACCACACAGCCACTCCAAGCCATATGTGAGGTCCAATGGAAGGAAGTTTGAGAGATCTAGAGGAAAGAGAAACAGCCAGGGGATCTAG

mRNA sequence

GGGATCGATCTCGTTGCAGGAGGAAAGATTAAACTGGTCATGCTGGGAGTAGAAGCTTATTGCACGTGCATTTACTTGAATAAAGTCGTTCTGTTTGCCTGCTTACACACTTACAATGTTGTGATTCTCAAGCGCTTATTTATGAGCAAGGTTAACAAGCCTCCACTTTCGCTTTCTAGGCTTATCCATTTCATGAAAGGAAAGTCCCAGCATTGGAAGTTGCAGCTCTGGTGTATACTGAGACAGCCAGGGCAAGGATCGAAAAGGCTGGCAGGAAATGTTCGACATTTGACCAAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGAACTCTCGGGAGGCAGTGAAGCATTTCGGTCCTGCACCGGGTGTACCACACAGCCACTCCAAGCCATATGTGAGGTCCAATGGAAGGAAGTTTGAGAGATCTAGAGGAAAGAGAAACAGCCAGGGGATCTAG

Coding sequence (CDS)

GGGATCGATCTCGTTGCAGGAGGAAAGATTAAACTGGTCATGCTGGGAGTAGAAGCTTATTGCACGTGCATTTACTTGAATAAAGTCGTTCTGTTTGCCTGCTTACACACTTACAATGTTGTGATTCTCAAGCGCTTATTTATGAGCAAGGTTAACAAGCCTCCACTTTCGCTTTCTAGGCTTATCCATTTCATGAAAGGAAAGTCCCAGCATTGGAAGTTGCAGCTCTGGTGTATACTGAGACAGCCAGGGCAAGGATCGAAAAGGCTGGCAGGAAATGTTCGACATTTGACCAAGCTTGCTTTGAGGGCTCATCTGGGTCAGAACACGAACTCTCGGGAGGCAGTGAAGCATTTCGGTCCTGCACCGGGTGTACCACACAGCCACTCCAAGCCATATGTGAGGTCCAATGGAAGGAAGTTTGAGAGATCTAGAGGAAAGAGAAACAGCCAGGGGATCTAG

Protein sequence

GIDLVAGGKIKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKRLFMSKVNKPPLSLSRLIHFMKGKSQHWKLQLWCILRQPGQGSKRLAGNVRHLTKLALRAHLGQNTNSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKRNSQGI

Homology

[Close]

BLAST of Bhi02G001712 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 125.2 bits (313), Expect = 4.6e-29
Identity = 90/184 (48.91%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLN---KVVLFACLHT---YNVVILKRLFMSKVNKP 60
           GIDL+AGGK K            +YL    K+  F    T   +N VILKRLFMSKVNK 
Sbjct: 2   GIDLIAGGKSKKTK-RTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRL+ FM GK     + +  I                LR   +   R+    G   
Sbjct: 62  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVR+ GRKFE++RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 181

[Close]

BLAST of Bhi02G001712 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 5.1e-28
Identity = 88/184 (47.83%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDL+AGGK K            +YL  +V L+  L       +N VILKRLFMSKVNK 
Sbjct: 2   GIDLIAGGKSKKTK-RTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRL+ FM GK     + +  I                LR   +   R+    G   
Sbjct: 62  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHS++KPYVR  GRKFE++RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 181

[Close]

BLAST of Bhi02G001712 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 56/132 (42.42%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 48  MSKVNKPPLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL- 107
           MSKVNK PLSLSRL+ +M GK     + +  +                LR       R+ 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 108 --AGNVRHLTKLALRAHL-GQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRK 153
              G      +LAL      +NT       N+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

[Close]

BLAST of Bhi02G001712 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 56/132 (42.42%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 48  MSKVNKPPLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL- 107
           MSKVNK PLSLSRL+ +M GK     + +  +                LR       R+ 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 108 --AGNVRHLTKLALRAHL-GQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRK 153
              G      +LAL      +NT       N+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

[Close]

BLAST of Bhi02G001712 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 6.5e-28
Identity = 90/184 (48.91%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLN---KVVLFACLHT---YNVVILKRLFMSKVNKP 60
           GIDL+AGGK K            +YL    K+  F    T   +N VILKRLFMSKVNK 
Sbjct: 2   GIDLIAGGKSKKTK-RTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRL+ FM GK     + +  I                LR   +   R+    G   
Sbjct: 62  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVR+ GRKFE++RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 181

[Close]

BLAST of Bhi02G001712 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 88/184 (47.83%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDL+AGGK K            +YL  +V L+  L       +N VILKRLFMSKVNK 
Sbjct: 2   GIDLIAGGKSKKTK-RTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRL+ FM GK     + +  I                LR   +   R+    G   
Sbjct: 62  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHS++KPYVR  GRKFE++RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 181

[Close]

BLAST of Bhi02G001712 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 80/181 (44.20%), Postives = 98/181 (54.14%), Query Frame = 0


Query: 3   DLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKPPL 62
           DL AGGK K            IYL  +V L+  L       +N VILKRLFMSKVN+PPL
Sbjct: 1   DLKAGGKNKKTK-RTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPL 60

Query: 63  SLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVRHL 122
           SLSRLI +M+GK     + +  +                L+       R+    G     
Sbjct: 61  SLSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTF 120

Query: 123 TKLALRAHLGQNT------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKRNSQ 153
            +LALR  L          N+REAVKHFGPAPGVPHSH+KPYVRS GRKFE++RG+R S+
Sbjct: 121 DQLALRLPLTDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

[Close]

BLAST of Bhi02G001712 vs. ExPASy Swiss-Prot
Match: Q0PXY6 (60S ribosomal protein L18 OS=Diaphorina citri OX=121845 GN=RpL18 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 38  YNVVILKRLFMSKVNKPPLSLSRLIHFMKGKSQHWKL-----------QLW-------CI 97
           +N +ILKRLFMSK+N+PP+++S+++ FMK  ++  ++           ++W       C 
Sbjct: 43  FNKIILKRLFMSKINRPPMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTVCA 102

Query: 98  LRQPGQGSKRL---AGNVRHLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSH 153
           LR   +   R+    G +    +LALRA  G+NT         REA KHFGPAPGVPHSH
Sbjct: 103 LRVTDKARSRILKAGGEIITFDQLALRAPTGKNTVLMQGKRTGREANKHFGPAPGVPHSH 162

[Close]

BLAST of Bhi02G001712 vs. ExPASy Swiss-Prot
Match: Q4GXG7 (60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-21
Identity = 66/144 (45.83%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 38  YNVVILKRLFMSKVNKPPLSLSRLIHFMKGKSQHW-------------------KLQLWC 97
           +N +ILKRLFMSK+ +PP+SLS+++ FMK   +                     KL + C
Sbjct: 43  FNKIILKRLFMSKIYRPPISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSI-C 102

Query: 98  ILR---QPGQGSKRLAGNVRHLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHS 153
            LR       G  +  G V    +LALR+  G  T       N+REAVKHFGPAPGVPHS
Sbjct: 103 ALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHS 162

[Close]

BLAST of Bhi02G001712 vs. NCBI nr
Match: XP_038878458.1 (uncharacterized protein LOC120070687 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 5.8e-50
Identity = 101/107 (94.39%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 10  IKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKRLFMSKVNKPPLSLSRLIHFMKGKS 69
           +KLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKRLFMSKVNKPPLSLSRLIHFMKGKS
Sbjct: 36  VKLVMLGVEAYCTCIYLNKVVLFACLHTYNVVILKRLFMSKVNKPPLSLSRLIHFMKGKS 95

Query: 70  QHWKLQLWCILRQPGQGSKRLAGNVRHLTKLALRAHLGQNTNSREAV 117
           QHWKLQLWCILRQPGQGSKRLAGNVRHLTKLALRAHLGQNT S  ++
Sbjct: 96  QHWKLQLWCILRQPGQGSKRLAGNVRHLTKLALRAHLGQNTGSESSI 142

[Close]

BLAST of Bhi02G001712 vs. NCBI nr
Match: KAF2307276.1 (hypothetical protein GH714_026054 [Hevea brasiliensis])

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-29
Identity = 91/165 (55.15%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLN---KVVLFACLHT---YNVVILKRLFMSKVNKP 60
           GIDL AGGK K            IYL    K+  F    T   +N VILKRLFMSKVNKP
Sbjct: 47  GIDLKAGGKSKKTK-RTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 106

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCILRQPGQGSKRLAGNVRHLTKLALRAHLGQNT---- 120
           PLSLSRLI FMKGK    K+             ++  G      +LALRA LGQNT    
Sbjct: 107 PLSLSRLITFMKGKVPELKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLR 166

Query: 121 ---NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKRNSQG 153
              N+REAVKHFGPAPGVPHSH+KPYVRS GRKFER+RG+RNS+G
Sbjct: 167 GPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRG 210

[Close]

BLAST of Bhi02G001712 vs. NCBI nr
Match: XP_008450608.1 (PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa] >TYK10265.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 5.7e-29
Identity = 99/184 (53.80%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDLVAGGK K     V      IYL  +V L+  L       +N VILKRLFMSKVNKP
Sbjct: 2   GIDLVAGGKSKKTK-RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRLI FMKGK     + +  I                LR       R+    G   
Sbjct: 62  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVRS GRKFER+RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 181

[Close]

BLAST of Bhi02G001712 vs. NCBI nr
Match: KAG6588563.1 (60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.9 bits (346), Expect = 7.4e-29
Identity = 98/184 (53.26%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDLVAGGK K            IYLN +V L+  L       +N VILKRLFMS+VNKP
Sbjct: 2   GIDLVAGGKSKKTK-RTAPKSDDIYLNLLVKLYRFLVRRTGSNFNAVILKRLFMSRVNKP 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRLI FMKGK     + +  I                LR       R+    G   
Sbjct: 62  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVRS GRKFER+RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGCKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 181

[Close]

BLAST of Bhi02G001712 vs. NCBI nr
Match: XP_038887726.1 (60S ribosomal protein L18-2-like [Benincasa hispida])

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 98/184 (53.26%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDLVAGGK K            IYL  +V L+  L       +N VILKRLFMSKVNKP
Sbjct: 2   GIDLVAGGKSKKTK-RTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRLI FMKGK     + +  I                LR       R+    G   
Sbjct: 62  PLSLSRLIQFMKGKESKIAVVVGTITDDTRVYEVPALKVAALRFTETARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVRS GRKFER+RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 181

[Close]

BLAST of Bhi02G001712 vs. ExPASy TrEMBL
Match: A0A6A6M4R8 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_026054 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 91/165 (55.15%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLN---KVVLFACLHT---YNVVILKRLFMSKVNKP 60
           GIDL AGGK K            IYL    K+  F    T   +N VILKRLFMSKVNKP
Sbjct: 47  GIDLKAGGKSKKTK-RTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 106

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCILRQPGQGSKRLAGNVRHLTKLALRAHLGQNT---- 120
           PLSLSRLI FMKGK    K+             ++  G      +LALRA LGQNT    
Sbjct: 107 PLSLSRLITFMKGKVPELKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLR 166

Query: 121 ---NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKRNSQG 153
              N+REAVKHFGPAPGVPHSH+KPYVRS GRKFER+RG+RNS+G
Sbjct: 167 GPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRG 210

[Close]

BLAST of Bhi02G001712 vs. ExPASy TrEMBL
Match: A0A5A7U942 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004150 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29
Identity = 99/184 (53.80%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDLVAGGK K     V      IYL  +V L+  L       +N VILKRLFMSKVNKP
Sbjct: 2   GIDLVAGGKSKKTK-RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRLI FMKGK     + +  I                LR       R+    G   
Sbjct: 62  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVRS GRKFER+RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 181

[Close]

BLAST of Bhi02G001712 vs. ExPASy TrEMBL
Match: A0A1S3BPL9 (60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29
Identity = 99/184 (53.80%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDLVAGGK K     V      IYL  +V L+  L       +N VILKRLFMSKVNKP
Sbjct: 2   GIDLVAGGKSKKTK-RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRLI FMKGK     + +  I                LR       R+    G   
Sbjct: 62  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVRS GRKFER+RGKR
Sbjct: 122 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 181

[Close]

BLAST of Bhi02G001712 vs. ExPASy TrEMBL
Match: A0A061DRU8 (Ribosomal protein L18 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_004688 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.0e-29
Identity = 94/177 (53.11%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLN---KVVLFACLHT---YNVVILKRLFMSKVNKP 60
           GIDLVAGGK K            IYL    K+  F    T   +N VILKRLFMSKVNKP
Sbjct: 2   GIDLVAGGKSK-KSKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 61

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRLI FMK K     + +  +                LR       R+    G   
Sbjct: 62  PLSLSRLIEFMKCKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 121

Query: 121 HLTKLALRAHLGQNTNSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKRNSQG 153
              +LALRA LGQNTNSREAVKHFGPAPGVPHSH+KPYVRS GRKFER+RG+RNS+G
Sbjct: 122 TFDQLALRAPLGQNTNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKG 177

[Close]

BLAST of Bhi02G001712 vs. ExPASy TrEMBL
Match: A0A0A0LWD1 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569250 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28
Identity = 98/184 (53.26%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 1   GIDLVAGGKIKLVMLGVEAYCTCIYLNKVV-LFACL-----HTYNVVILKRLFMSKVNKP 60
           GIDLVAGGK K     V      IYL  +V L+  L       +N VILKRLFMSKVNKP
Sbjct: 59  GIDLVAGGKSKKTK-RVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 118

Query: 61  PLSLSRLIHFMKGKSQHWKLQLWCI----------------LRQPGQGSKRL---AGNVR 120
           PLSLSRLI F KGK     + +  I                LR       R+    G   
Sbjct: 119 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 178

Query: 121 HLTKLALRAHLGQNT-------NSREAVKHFGPAPGVPHSHSKPYVRSNGRKFERSRGKR 153
              +LALRA LGQNT       NSREAVKHFGPAPGVPHSHSKPYVRS GRKFER+RGKR
Sbjct: 179 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 238

The following BLAST results are available for this feature:

BLAST of Bhi02G001712 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05590.1	4.6e-29	48.91	ribosomal protein L18	[more]
AT5G27850.1	5.1e-28	47.83	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.1	5.8e-16	42.42	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.2	5.8e-16	42.42	Ribosomal protein L18e/L15 superfamily protein	[more]

BLAST of Bhi02G001712 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42791	6.5e-28	48.91	60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2	[more]
Q940B0	7.2e-27	47.83	60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1	[more]
O65729	1.8e-22	44.20	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV...	[more]
Q0PXY6	1.8e-22	42.66	60S ribosomal protein L18 OS=Diaphorina citri OX=121845 GN=RpL18 PE=2 SV=1	[more]
Q4GXG7	1.5e-21	45.83	60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1	[more]

BLAST of Bhi02G001712 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878458.1	5.8e-50	94.39	uncharacterized protein LOC120070687 [Benincasa hispida]	[more]
KAF2307276.1	2.5e-29	55.15	hypothetical protein GH714_026054 [Hevea brasiliensis]	[more]
XP_008450608.1	5.7e-29	53.80	PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosoma...	[more]
KAG6588563.1	7.4e-29	53.26	60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038887726.1	1.6e-28	53.26	60S ribosomal protein L18-2-like [Benincasa hispida]	[more]

BLAST of Bhi02G001712 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A6M4R8	1.2e-29	55.15	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_026054 PE=3 SV=1	[more]
A0A5A7U942	2.7e-29	53.80	60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BPL9	2.7e-29	53.80	60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1	[more]
A0A061DRU8	8.0e-29	53.11	Ribosomal protein L18 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_004688 PE=3 SV...	[more]
A0A0A0LWD1	1.4e-28	53.26	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.100.10.10		coord: 25..76 e-value: 1.4E-8 score: 36.5 coord: 85..153 e-value: 9.9E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..153
None	No IPR available	PANTHER	PTHR10934:SF19	60S RIBOSOMAL PROTEIN L18-1-RELATED	coord: 1..71 coord: 91..152
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 37..71 e-value: 4.7E-9 score: 35.9 coord: 93..152 e-value: 2.4E-16 score: 59.7
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 1..71 coord: 91..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi02M001712	Bhi02M001712	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome