Bhi02G001676 (gene) Wax gourd (B227) v1

Overview
NameBhi02G001676
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr2: 54712496 .. 54712688 (-)
RNA-Seq ExpressionBhi02G001676
SyntenyBhi02G001676
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCATCACGTTTGGGTCTCTCCTGGTCGTGGGTCTCTCCATGGTGGAGCCTGGTTCTCGCACATCCCAAATGAGAATGGTGCAATCGCCAGAGGCAGAAGCAAAGACATTGTCATGACGAGGGTTCCAGACGAAGGAATAGACGCAATAGGCATGCTCTTTGAATGTTCTGACACTGGTAGGGCGGTCTAG

mRNA sequence

TCTCCATCACGTTTGGGTCTCTCCTGGTCGTGGGTCTCTCCATGGTGGAGCCTGGTTCTCGCACATCCCAAATGAGAATGGTGCAATCGCCAGAGGCAGAAGCAAAGACATTGTCATGACGAGGGTTCCAGACGAAGGAATAGACGCAATAGGCATGCTCTTTGAATGTTCTGACACTGGTAGGGCGGTCTAG

Coding sequence (CDS)

TCTCCATCACGTTTGGGTCTCTCCTGGTCGTGGGTCTCTCCATGGTGGAGCCTGGTTCTCGCACATCCCAAATGAGAATGGTGCAATCGCCAGAGGCAGAAGCAAAGACATTGTCATGACGAGGGTTCCAGACGAAGGAATAGACGCAATAGGCATGCTCTTTGAATGTTCTGACACTGGTAGGGCGGTCTAG

Protein sequence

LHHVWVSPGRGSLHGGAWFSHIPNENGAIARGRSKDIVMTRVPDEGIDAIGMLFECSDTGRAV
Homology
[Close]
BLAST of Bhi02G001676 vs. NCBI nr
Match: PON87316.1 (hypothetical protein TorRG33x02_169520, partial [Trema orientale])

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 14  HGGAWFSHIPNENGAIARGRSKDIVMTRVPDEGIDAIGMLFECSDTGRAV 64
           HGG   +H+P+ +GA+ RG  + I MTRVPD  I A+ +L EC   G AV
Sbjct: 94  HGGTGLTHVPDADGAVPRGGGEHIPMTRVPDGAIHAVSVLLECPHAGGAV 143

[Close]
BLAST of Bhi02G001676 vs. NCBI nr
Match: PON77003.1 (hypothetical protein PanWU01x14_030120 [Parasponia andersonii])

HSP 1 Score: 53.5 bits (127), Expect = 7.5e-04
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 14  HGGAWFSHIPNENGAIARGRSKDIVMTRVPDEGIDAIGMLFECSDTGRAV 64
           HG A  +H+P+ +GA+ RG  + I MTRVPD  + A+ +L EC   G AV
Sbjct: 94  HGRAGLTHVPDADGAVPRGGGEHISMTRVPDGAVHAVSVLLECPHAGGAV 143

[Close]
BLAST of Bhi02G001676 vs. ExPASy TrEMBL
Match: A0A2P5EP52 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_169520 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.6e-05
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 14  HGGAWFSHIPNENGAIARGRSKDIVMTRVPDEGIDAIGMLFECSDTGRAV 64
           HGG   +H+P+ +GA+ RG  + I MTRVPD  I A+ +L EC   G AV
Sbjct: 94  HGGTGLTHVPDADGAVPRGGGEHIPMTRVPDGAIHAVSVLLECPHAGGAV 143

[Close]
BLAST of Bhi02G001676 vs. ExPASy TrEMBL
Match: A0A2P5DUM7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_030120 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-04
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 14  HGGAWFSHIPNENGAIARGRSKDIVMTRVPDEGIDAIGMLFECSDTGRAV 64
           HG A  +H+P+ +GA+ RG  + I MTRVPD  + A+ +L EC   G AV
Sbjct: 94  HGRAGLTHVPDADGAVPRGGGEHISMTRVPDGAVHAVSVLLECPHAGGAV 143

The following BLAST results are available for this feature:
BLAST of Bhi02G001676 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi02G001676 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi02G001676 vs. NCBI nr
Match NameE-valueIdentityDescription
PON87316.12.0e-0448.00hypothetical protein TorRG33x02_169520, partial [Trema orientale][more]
PON77003.17.5e-0446.00hypothetical protein PanWU01x14_030120 [Parasponia andersonii][more]
BLAST of Bhi02G001676 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5EP529.6e-0548.00Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_169... [more]
A0A2P5DUM73.6e-0446.00Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_030120 PE... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001676Bhi02M001676mRNA