MELO3C015565 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015565
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Locationchr2 : 2909963 .. 2915847 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTCATTATATTCTACGAAAGTGTTGAATTTCGTAGTTCTCCCTCTCTCTCGCAAAATCGCTCAAAATCCCGTCGTCGAAACGATCCTCCGGCTCCCACTGTCGATACAATCCTCCAGCCGCCGCTGTCGAAAGAATTCTCCAGCCAACGCCGTTGAAATTCGGGACGTCGCAACGCCGTCGGAATCAAGTTCGCGCCATCTCTGTTCGTCGTCTTCCGCCGTCCAGTGCTTCTCCTTGCTCCCTCCTCTGTCCGGTTCGTTCTCCGTTCATTCCTATAGTGCTCGTTTTTGCTGGTTATTTCGTTTTCTTGCTTCCGTGTTCTAATGTTGGAATTTGACACGTAAATTTAAAATTAACTTTTGAGTTTGATTGTGGTTTACTGAATAGCATTTCATTAGGGTTTTGTATCATAAACGTGAAGAAGATTACTTGTTGTTGCGAGTTATGAGCGAACGAGGAAGAGATTTTGAGTGAATGTTAGGATTTTGAGTATATGTTAGGATTTTGAATATATGTTAGGATGGAAAGGGTGAGAACAGAGGGAACGAGAACTTGAGCGAGGTGTCTGCAATTAGTAAGTAAAATTTCTCCATTACCACTGGTGCAAATTTCAAACAAAGGGGATATCTTGAGACACCAGAGTAGGAACACTTGTGGCACATGCTCTACGTGACTGATGAGCCCGAGACCACAAAAGAGAATTGAAAAAGAAAAACATCACCCATGGATGACAACAACTTTCACCACCAATCAATAAAATGAGGCTGGATTCAAGATGTATGCCTATGGATTCAACACCCTGATCCCAAATCGAAGATACCAAACAAAGGGACACAGAAATCATTGTCCATGAGATTGTAGAAACTCCACACTGAAAATTTCTATTAAAAACACAGGAATCTACAGTTTGTACAATCATTTGCACAAGCATCTTCAAAACATAAATCAAAAAATGATTCACACTAGAACGTGAATTAAGAATTTAAGAGGACAAGTTTGAAGCACACTGCCTTCGGCATTGAATCAATGTCTTCTTCTTGGACCATTGGAAAGCAACAAACCGTAAATTCTAGTTGCACTTTTTTACTTGAACCTTTTGAGTTGATTGTTGAACTTTAGGCCCCTATGGTGTTTTACTAATTTTGAAGATCTAAGTTGAAGTTTCTTCATTTGGTAACTGCTCTCGTCTTTTACTCTTTGTCAAATGGTAACAACTCCTTATTCACGTATGGATTAAAGTATATAGATCAAGTTGACCATCGTGCTTATCCTTTGGCCGACAGGTCCAATGCCAATTCAAATAAAAGGTTTAAGTCATGGTGACTACATACTTGGTATTTAATATTATAAAGAGTAACTATGATAATATGATAAGGTTCAATAGATATATGGAAGAAATTATAGGTCTAGCCATACCATTATAGTATAGGTCAGGCTTACACTCTACTACTGATAGGTTTGTCTACTATTGTGGTACTTCAAAATGGTCCCATTAGACATTAATAAATGTTAAATTTGGTCTGAAATCTGGTCTGGTTTGAATTTATTAACTATGGTCTTTCTGGTGGTAGTTCATATTTATGACGATTGTAATATTGGTCACCAGGTTGAGATTATGCTGGATGGTTTGATATCGACTTGTTTTGCCGACATCTATTGCAGTCATGTCTGTTTTCTTCTTTTCCTTATAGCTTGGTAAAAACTTGGATAAATTCCTCTTGCATTATCATCTAGGCACAGTTGGGGGTGGCGTTTTGGTTAATCTGGTTTAGCCTTTGAACTGTTATGTGTTTGGTTTGATTTGTTTGTAAGTTGAACTTTTCAATTTAGCATTTGAAATTCTATGTATATTTATAGGCAAAAAATTTAATTTACTCAATTTTGTGCAGATGATTAATTAAGTAAAAATAACTAGAAATAAGTTGTAAAATGGGTAATCCAGTACGTAAAGGGTACTAAGAACTATGGTTAAATATGGATAGATAGTGATTATGAAATTCAATGTTAATAAAGTTTTGTTGACTTGATTTTACCTTTTGATTTAGATAAGAGAAGATCTATATCTGTCTTTTAACAAACCTTTTAGAAAGGAGTATAATTAAGTGGTCTTCTAGTGTTGCATTCTTTTGTTTGAATGATTTTGATGTGTTCATTATTATGCTTATTCATGCATTGACTATTATAGTCAAGTTCAACTTTATTCTCATATAGTTTTAAGGAAAAAAAAATTATCATTCCCATCTAGTTCAGTTCAATGTAGTTTATCACATTCCAAGAGATTTAGTTAAACACTTGTCCTTAACATATCAAATATTGTCTGCTTAGAGAACGTCCAGGCTTTTAACTTGGAGTTTGCACTTTAGTTACTCTAAGTTGTTTATTTCATGCGGGGTGAATTGAGCTTAGTTGGAATTCTTACCGTGCATTTAGACTATCTTTCTTCACTTTTCCATTCAAGCTGTAATTAGTTAAGATTGTTCCAATTCCTCATATCTTCCTTTTTCTCCCTTGCTACATCTTCCATGGGGTTTTCTTTTCAAAATTTATAGAAACCCCCCCACCCCCCAAAAAACAAAAGCTGCTCAATATAGAACCTAAGTATCTTGTGCGTTTCTGCTGCAAACAAGTTTGACTAAAGCCTAACTTCTTAGATATTTGAATTCGAAATCGTCTAATGGACAAATTATGGATGATGGAGAAGAGAGTGTCTACGGAGTATGAATTGGGAGTGGAAGCGTCCATTCAATTTGGTTTTCGTGATGGCAAAGGTTCCGGTACTATTAGGTGTCCATGTTTGAAATCTGGGAATCATTTGTCGCTCCACTGCCGCTGGTGATAAGCTCTTGAGTTCTTGAACCAGGCCCTAATGATGAATTTTAGCTTCTATTTTGTTGTAAATTAATCTCTTCGTTTCAAGATCATCGATATATTACTCAAGGACTAATTTTGTTTGGGTAATTTATGCTAGCGGTCACGGACTAATTTTGGCATATTAACCTTGGAATCTTCCTTACATTGGCATGTAATGGATAGGTCAAACAAAGTTGTGTGAGCGGTTTTTGGTCAATGTGATCATGTTCTACATGTAATAACCTATAAGGGTAGTGACAAGATGTTTATGTTATGGAAATCGTGTTAGTTTGAGCTTACACATCTACTTTGTTGAGTTTTTACTTTCATTGTTGGTCTATTTCACAGTTTGAAGTTAGAGTTAGCTTTGATTTTTCCTTTAGGTTTGTTTACTCAAACTATTTTAGCTTTGTTTGTGTATTAATTTTTTTCTTTTTCTTTTTTACTTTTGGAAGATCAGTGAAAGTTGATGCTTGTTGTGACAGTTTAATAATTTGACTTTGAAGTCTTTTCTGGAGTAATATTGCGGAAGATTTCTATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGTAAGTTCATTTGGAATCAGAGTTTCTTTCTCGTTATTTCAATAATGTTTGCATTTGTCATTGATTTATTGAATCCCTTTGCCTACGTGCTAACTTGCTTATAATCCGAGCATTCTTCTTGTTGATGTTGTATACCTACAATGTTTCTTGTTCTTTTTTTTCTTTCTTGGAAACGATTAATATCTTCTACTTGACCTTGATTGATAACAATGGACGATGAAAGTACAGACATTGTGAGCTGTGTGGGCTTTTCTTCTTATTTTGATTTATGAGAACTTTTTACCATCATTTTCCGAACAAATTGACACAGTATTATGGTGTATGTGGCAGGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGTAGGTTGCATTTATTCCAATTGTATTACCTCTATTTATGCCTTTTGTCTATTAAGTTGTTAGTTTAAGCATAGCTAGGTGGACAAGACACCCATTGTCATCTCAAAAGTCAACAATTCAATTCCTCACCCACCCTATTGAGCTAAAACAAAAATATGAGTCTTGCTCCACTATTTTGGTGCTATCTACTATATTAGTTGCTGAACCAATTACCATTCAATCCAAAGGTTGATATGTTTGATCTCCCACTCTAACACCGTTGAACTAGGGAAAATAATTGTCTAGAAAATAGGTGTAAATTCTCTTTCTGGCATCATTGTCATACAGCCACTGCGTTAGTTATTTTCCATATTAGTTGCTGAACTAATTTTGTATTTGTGGCGCTATAAATGAAGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACGATTTACAAGTTGTTGGGTTTGTATTGTTCAAGAGCACATTTTGGAAAAAATAGTGAAATGTCATGTTAATTATTGCTTTGTTATCTTAATACTTCATATTAACAGGGGAAAAAAACTTTTGACAACTACATTAACCTTTTGGTATTCGTAA

mRNA sequence

GTGTCATTATATTCTACGAAAGTGTTGAATTTCGTAGTTCTCCCTCTCTCTCGCAAAATCGCTCAAAATCCCGTCGTCGAAACGATCCTCCGGCTCCCACTGTCGATACAATCCTCCAGCCGCCGCTGTCGAAAGAATTCTCCAGCCAACGCCGTTGAAATTCGGGACGTCGCAACGCCGTCGGAATCAAGTTCGCGCCATCTCTGTTCGTCGTCTTCCGCCGTCCAGTGCTTCTCCTTGCTCCCTCCTCTGTCCGTTTAATAATTTGACTTTGAAGTCTTTTCTGGAGTAATATTGCGGAAGATTTCTATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACGATTTACAAGTTGTTGGGTTTGTATTGTTCAAGAGCACATTTTGGAAAAAATAGTGAAATGTCATGTTAATTATTGCTTTGTTATCTTAATACTTCATATTAACAGGGGAAAAAAACTTTTGACAACTACATTAACCTTTTGGTATTCGTAA

Coding sequence (CDS)

ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAGTTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAATGTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATCTGCTCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACGATTTACAAGTTGTTGGGTTTGTATTGTTCAAGAGCACATTTTGGAAAAAATAGTGAAATGTCATGTTAATTATTGCTTTGTTATCTTAATACTTCATATTAACAGGGGAAAAAAACTTTTGACAACTACATTAACCTTTTGGTATTCGTAA
Homology
[Close]
BLAST of MELO3C015565 vs. TrEMBL
Match: A0A0A0KW48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166940 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.7e-54
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 299

Query: 121 RPRK 125
           RP++
Sbjct: 300 RPQE 302

[Close]
BLAST of MELO3C015565 vs. TrEMBL
Match: A0A0A0LBP9_CUCSA (Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_3G633280 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.2e-54
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRA
Sbjct: 59  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 118

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 119 IGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 178

Query: 121 RPRK 125
           R R+
Sbjct: 179 RSRE 181

[Close]
BLAST of MELO3C015565 vs. TrEMBL
Match: M1BX27_SOLTU (Gamma-tubulin complex component OS=Solanum tuberosum GN=PGSC0003DMG400021318 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.7e-28
Identity = 68/124 (54.84%), Postives = 97/124 (78.23%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           M+E   IL NNR+ED+ WLCSL+ESELDLLI +K+L+ QRAK IGH++LA KFDLKTLRA
Sbjct: 1   MKEQMAILGNNRIEDVWWLCSLTESELDLLIGLKVLIQQRAKKIGHKSLANKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELR----TSDVSDLSQSATLNACNLLDSNVEKI---LSIDEIMASICSD 118
           + FVLME+LKG+LR    T D ++   S+TL+ACNLL+ +++K    + ++++ + IC+D
Sbjct: 61  LSFVLMENLKGKLRDLSGTPDTAE--SSSTLDACNLLNYDLDKTFANMGVEQLSSYICND 120

[Close]
BLAST of MELO3C015565 vs. TrEMBL
Match: A0A0V0HHC0_SOLCH (Gamma-tubulin complex component OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.0e-28
Identity = 67/124 (54.03%), Postives = 97/124 (78.23%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           M+E   IL NNR+ED+ WLCSL+ESELDLLI +K+L+ QRAK IGH++LA KFDLKTLRA
Sbjct: 1   MKEQMAILGNNRIEDVRWLCSLTESELDLLIGLKVLIQQRAKKIGHKSLANKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELR----TSDVSDLSQSATLNACNLLDSNVEKI---LSIDEIMASICSD 118
           + FVLME+LKG+LR    T D ++   S++L+ACNLL+ +++K    + ++++ + IC+D
Sbjct: 61  LSFVLMENLKGKLRDLSGTPDTAE--SSSSLDACNLLNYDLDKTFANMGVEQLSSYICND 120

[Close]
BLAST of MELO3C015565 vs. TrEMBL
Match: K4AST4_SOLLC (Gamma-tubulin complex component OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-27
Identity = 68/122 (55.74%), Postives = 95/122 (77.87%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           M+E   IL NNR+ED+ WLCSL+ESELDLLI +K+L+ QRAK IGH++LA KFDLKTLRA
Sbjct: 1   MKEQMAILGNNRIEDVRWLCSLTESELDLLIGLKVLIQQRAKKIGHKSLANKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELR-TSDVSDLSQ-SATLNACNLLDSNVEKI---LSIDEIMASICSDRR 118
           + FVLME+LKG+LR  S   D ++ S+TL+ACNLL+   +K    + ++++ + IC+D+R
Sbjct: 61  LSFVLMENLKGKLRDLSGTPDTAEFSSTLDACNLLNYVRDKTFANMGVEQLSSYICNDKR 120

[Close]
BLAST of MELO3C015565 vs. TAIR10
Match: AT1G80245.1 (AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component)

HSP 1 Score: 127.9 bits (320), Expect = 4.5e-30
Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  IGFVLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKK 120
           +G VLMEH +  ++       S + Q   L+ CNLL ++V+  + I+EI+  IC ++ KK
Sbjct: 61  LGLVLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICDNKSKK 120

Query: 121 PGKRPRK 125
             ++ R+
Sbjct: 121 KARKRRR 127

[Close]
BLAST of MELO3C015565 vs. TAIR10
Match: AT4G00695.3 (AT4G00695.3 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26
Identity = 63/127 (49.61%), Postives = 88/127 (69.29%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLKTLR 60
           MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  AIGFVLMEHLKGELRTSDVSDLSQS-----ATLNACNLLDSNVEKILSIDEIMASICSDR 120
           ++G VLME+++   R  D + L+ S     + L++CNLL ++V+  + I+EI+  IC+  
Sbjct: 61  SLGLVLMEYVR--KRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDICNKN 120

Query: 121 RKKPGKR 122
               G R
Sbjct: 121 WATKGTR 125

[Close]
BLAST of MELO3C015565 vs. NCBI nr
Match: gi|659100239|ref|XP_008450997.1| (PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo])

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-61
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRKN 126
           RPRKN
Sbjct: 121 RPRKN 125

[Close]
BLAST of MELO3C015565 vs. NCBI nr
Match: gi|659120858|ref|XP_008460383.1| (PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-54
Identity = 114/124 (91.94%), Postives = 118/124 (95.16%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLR 
Sbjct: 1   MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRT 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDV+DLSQSA LNACNLLDSN+EK L IDEIM SIC DRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVTDLSQSA-LNACNLLDSNLEKSLPIDEIMTSICLDRRKKPGK 120

Query: 121 RPRK 125
           RPR+
Sbjct: 121 RPRE 123

[Close]
BLAST of MELO3C015565 vs. NCBI nr
Match: gi|778692248|ref|XP_011653427.1| (PREDICTED: uncharacterized protein LOC105435221 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 2.5e-54
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRK 125
           RP++
Sbjct: 121 RPQE 123

[Close]
BLAST of MELO3C015565 vs. NCBI nr
Match: gi|700198692|gb|KGN53850.1| (hypothetical protein Csa_4G166940 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 2.5e-54
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RA
Sbjct: 180 MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRA 239

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 240 IGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 299

Query: 121 RPRK 125
           RP++
Sbjct: 300 RPQE 302

[Close]
BLAST of MELO3C015565 vs. NCBI nr
Match: gi|778682197|ref|XP_011651668.1| (PREDICTED: uncharacterized protein LOC101210446 isoform X2 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-54
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60
           MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRA
Sbjct: 1   MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRA 60

Query: 61  IGFVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRRKKPGK 120
           IGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKILSIDEIMASICSDRRKKPGK
Sbjct: 61  IGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKILSIDEIMASICSDRRKKPGK 120

Query: 121 RPRK 125
           R R+
Sbjct: 121 RSRE 123

The following BLAST results are available for this feature:
BLAST of MELO3C015565 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW48_CUCSA1.7e-5491.94Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166940 PE=4 SV=1[more]
A0A0A0LBP9_CUCSA2.2e-5491.94Gamma-tubulin complex component OS=Cucumis sativus GN=Csa_3G633280 PE=3 SV=1[more]
M1BX27_SOLTU4.7e-2854.84Gamma-tubulin complex component OS=Solanum tuberosum GN=PGSC0003DMG400021318 PE=... [more]
A0A0V0HHC0_SOLCH8.0e-2854.03Gamma-tubulin complex component OS=Solanum chacoense PE=3 SV=1[more]
K4AST4_SOLLC2.3e-2755.74Gamma-tubulin complex component OS=Solanum lycopersicum PE=3 SV=1[more]
BLAST of MELO3C015565 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80245.14.5e-3049.61 Spc97 / Spc98 family of spindle pole body (SBP) component[more]
AT4G00695.33.0e-2649.61 FUNCTIONS IN: molecular_function unknown[more]
BLAST of MELO3C015565 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100239|ref|XP_008450997.1|2.1e-61100.00PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo][more]
gi|659120858|ref|XP_008460383.1|1.4e-5491.94PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo][more]
gi|778692248|ref|XP_011653427.1|2.5e-5491.94PREDICTED: uncharacterized protein LOC105435221 [Cucumis sativus][more]
gi|700198692|gb|KGN53850.1|2.5e-5491.94hypothetical protein Csa_4G166940 [Cucumis sativus][more]
gi|778682197|ref|XP_011651668.1|3.2e-5491.94PREDICTED: uncharacterized protein LOC101210446 isoform X2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007259GCP
IPR007259GCP
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
GO:0000226microtubule cytoskeleton organization
GO:0007020microtubule nucleation
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
GO:0000922spindle pole
GO:0005815microtubule organizing center
Vocabulary: Molecular Function
TermDefinition
GO:0043015gamma-tubulin binding
GO:0043015gamma-tubulin binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007020 microtubule nucleation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0000226 microtubule cytoskeleton organization
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0005840 ribosome
cellular_component GO:0000922 spindle pole
cellular_component GO:0045298 tubulin complex
molecular_function GO:0043015 gamma-tubulin binding
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU64808melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015565T3MELO3C015565T3mRNA
MELO3C015565T2MELO3C015565T2mRNA
MELO3C015565T1MELO3C015565T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU64808MU64808transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015565Wax gourdmewgoB304
MELO3C015565Cucurbita moschata (Rifu)cmomeB097
MELO3C015565Cucumber (Gy14) v1cgymeB238
MELO3C015565Cucurbita maxima (Rimu)cmameB059
MELO3C015565Cucurbita maxima (Rimu)cmameB104
MELO3C015565Cucurbita moschata (Rifu)cmomeB050
MELO3C015565Wild cucumber (PI 183967)cpimeB042
MELO3C015565Cucumber (Chinese Long) v2cumeB041
MELO3C015565Watermelon (Charleston Gray)mewcgB245
MELO3C015565Watermelon (97103) v1mewmB271
MELO3C015565Cucurbita pepo (Zucchini)cpemeB335
MELO3C015565Cucurbita pepo (Zucchini)cpemeB620
MELO3C015565Bottle gourd (USVL1VR-Ls)lsimeB396
MELO3C015565Cucumber (Gy14) v2cgybmeB038
MELO3C015565Silver-seed gourdcarmeB0096
MELO3C015565Silver-seed gourdcarmeB0504
MELO3C015565Cucumber (Chinese Long) v3cucmeB042
MELO3C015565Watermelon (97103) v2mewmbB249