Cla004570 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTGAGTGTTTTTTTTTTTTTTTTTTTCCTTGTCTTTTTTTCATCAGCACAATTACCATCTCAAATTAAATCATATTAATTACTAATAGAAGAATGAAATTTGTATTAATAATCTTCAATTAATCAATCTAATGGGCAGGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGGTAATTTTACATTTCTAA ATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGGTAATTTTACATTTCTAA ATGGCAGGGGTAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGACTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCACCGGCATCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCGCCGTCGTAAACCAGAAATCAATCCCAGCCGACAACCGCCGTCATCACGACGGCAGGGACTACCACCAGCGGCGAGCGATCGGAAACTCCGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTACGCGCTTCTGAAAGAGGCGAAGCAGAGTGGAAGGAAGAAGAAAAATAGTAATGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGGCGGAATAATGAAGGGGAAATGATGGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGTTATACGGCGATTTTCAATAAAGTGAAGACTGAGAAGCAAATTGGAGGTTCTAAGAGTCCTCAGGCCGTTCCGCCATTGATGAATCAAACCAAGCAACCAATTGCTAAAACTACTACTGCTACTAATACTCGTGGACCCACTTCATTTGCTTTCAAGGTAATTTTACATTTCTAA MAGVKSSSHVPKFGNWDSDDVPYTICFENARELRATGITFDPNDPDTYPPAAVVNQKSIPADNRRHHDGRDYHQRRAIGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSNGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKTEKQIGGSKSPQAVPPLMNQTKQPIAKTTTATNTRGPTSFAFKVILHF
BLAST of Cla004570 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.0e-19 Identity = 65/207 (31.40%), Postives = 96/207 (46.38%), Query Frame = 1
BLAST of Cla004570 vs. TrEMBL
Match: A0A0A0M0M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699040 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.3e-93 Identity = 176/218 (80.73%), Postives = 188/218 (86.24%), Query Frame = 1
BLAST of Cla004570 vs. TrEMBL
Match: A0A061GGZ7_THECC (RPM1 interacting protein 4, putative OS=Theobroma cacao GN=TCM_030331 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 9.8e-29 Identity = 93/227 (40.97%), Postives = 125/227 (55.07%), Query Frame = 1
BLAST of Cla004570 vs. TrEMBL
Match: A0A0B0Q117_GOSAR (RPM1-interacting 4-like protein OS=Gossypium arboreum GN=F383_15209 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 4.5e-26 Identity = 84/214 (39.25%), Postives = 116/214 (54.21%), Query Frame = 1
BLAST of Cla004570 vs. TrEMBL
Match: B9RXE0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0902970 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25 Identity = 80/217 (36.87%), Postives = 114/217 (52.53%), Query Frame = 1
BLAST of Cla004570 vs. TrEMBL
Match: A0A0D2SV69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185300 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-25 Identity = 85/221 (38.46%), Postives = 118/221 (53.39%), Query Frame = 1
BLAST of Cla004570 vs. NCBI nr
Match: gi|659118177|ref|XP_008458983.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]) HSP 1 Score: 367.5 bits (942), Expect = 1.7e-98 Identity = 183/218 (83.94%), Postives = 193/218 (88.53%), Query Frame = 1
BLAST of Cla004570 vs. NCBI nr
Match: gi|778664446|ref|XP_011660296.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis sativus]) HSP 1 Score: 349.4 bits (895), Expect = 4.7e-93 Identity = 176/218 (80.73%), Postives = 188/218 (86.24%), Query Frame = 1
BLAST of Cla004570 vs. NCBI nr
Match: gi|590626635|ref|XP_007026224.1| (RPM1 interacting protein 4, putative [Theobroma cacao]) HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28 Identity = 93/227 (40.97%), Postives = 125/227 (55.07%), Query Frame = 1
BLAST of Cla004570 vs. NCBI nr
Match: gi|728851071|gb|KHG30514.1| (RPM1-interacting 4 -like protein [Gossypium arboreum]) HSP 1 Score: 126.3 bits (316), Expect = 6.5e-26 Identity = 84/214 (39.25%), Postives = 116/214 (54.21%), Query Frame = 1
BLAST of Cla004570 vs. NCBI nr
Match: gi|1000967515|ref|XP_015574210.1| (PREDICTED: RPM1-interacting protein 4 [Ricinus communis]) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 80/215 (37.21%), Postives = 114/215 (53.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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