Carg07324 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTACTTGGGGCGAAAATGCAGATGAGCTTCGTTCTCGGCGTTGGACTTGCTGTGATTGTTGCAGTGATTATGTACTTCGGAGCTGGAATCTTCTCCGGAGATGTAACTGTGCAAGCCCTCATCCACCTCGGAGTGCCGGTATTAACCTTTTAAATATATTTATATCAACTTGAGCATAATTCAATTTATAAATCATATATTTTAAAATATATACGAGATTTATATACCCGACCTTATTCGTTTAGCTCTAAAATAAAGTCTCGAATTTGAACTAACTATTTTTCTTGTCTCAATCTCTCGTAGTTTGTGGCCGCCACACAGCCAATGAACTCCTTAGCATTCGTATTTGACGGAGTCAACTTTGGAGCTTCTGATTTTGCTTACTCTGCCTACTCTTTGGCATGTGCTCTCTTTTCTAGTCAACTACGTTCCGTTCTCAAATCGAAAAATTATTCAATAAGACTGTTACAACGCTGTTACATTTATCCTTAATAATCACGAGATTCATATTTAAAATATTTTTATAATTTATATCTCGTGCTAATAATCCATATTTGTTTCTATCCATAGACTTTGGTTTCCATTGCTACCATTCTCTCTCTCTTCCTTCTCTCCAAAAGCTATGGTTTCCTCGGGATTTGGACTGCTTTGGCCATCTACATGGCCCTTCGTACTCTCGTAGGATTGTTGAGGTATCTTTTATTCTCGAGATGATCGGTTCTTAATTTTTTTAAGATGAAATCGTGAATTAAAACATATTTTGGATTATTATGTTTTTTACGTGCTTTTATTGAGTACTAATTGTTTTAATGATAACTACAGTTGAATTCCCTAATTCAACTGTTAAAAAAATTGTTGGAATTGAGTCTCTAAATATTTTAAACGATTTATCTGATGGTTGTAGGATGGGAAGTGGAACAGGACCCTGGCGTTACCTAAGAGGGTCGTTGTTGCCCTAATTACGACGTTCTTACATCAGAAAAGAAAGTTATATCGGCGAAGCTTTATAACAACGATAATCTTGTCGGGTTTTTTTTTAAATGTTGTTATTATTATTATTGTTATTTTCTATAGTACAAAGTTGGGGAAGAGCTTCTTTCATACAACATATGTTATTGTTATAGA ATGAATTTACTTGGGGCGAAAATGCAGATGAGCTTCGTTCTCGGCGTTGGACTTGCTGTGATTGTTGCAGTGATTATGTACTTCGGAGCTGGAATCTTCTCCGGAGATGTAACTGTGCAAGCCCTCATCCACCTCGGAGTGCCGACTTTGGTTTCCATTGCTACCATTCTCTCTCTCTTCCTTCTCTCCAAAAGCTATGGTTTCCTCGGGATTTGGACTGCTTTGGCCATCTACATGGCCCTTCGTACTCTCGTAGGATTGTTGAGGATGGGAAGTGGAACAGGACCCTGGCGTTACCTAAGAGGGTCGTTGTTGCCCTAATTACGACGTTCTTACATCAGAAAAGAAAGTTATATCGGCGAAGCTTTATAACAACGATAATCTTGTCGGGTTTTTTTTTAAATGTTGTTATTATTATTATTGTTATTTTCTATAGTACAAAGTTGGGGAAGAGCTTCTTTCATACAACATATGTTATTGTTATAGA ATGAATTTACTTGGGGCGAAAATGCAGATGAGCTTCGTTCTCGGCGTTGGACTTGCTGTGATTGTTGCAGTGATTATGTACTTCGGAGCTGGAATCTTCTCCGGAGATGTAACTGTGCAAGCCCTCATCCACCTCGGAGTGCCGACTTTGGTTTCCATTGCTACCATTCTCTCTCTCTTCCTTCTCTCCAAAAGCTATGGTTTCCTCGGGATTTGGACTGCTTTGGCCATCTACATGGCCCTTCGTACTCTCGTAGGATTGTTGAGGATGGGAAGTGGAACAGGACCCTGGCGTTACCTAAGAGGGTCGTTGTTGCCCTAA MNLLGAKMQMSFVLGVGLAVIVAVIMYFGAGIFSGDVTVQALIHLGVPTLVSIATILSLFLLSKSYGFLGIWTALAIYMALRTLVGLLRMGSGTGPWRYLRGSLLP
BLAST of Carg07324 vs. NCBI nr
Match: XP_022948300.1 (protein DETOXIFICATION 43-like [Cucurbita moschata]) HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37 Identity = 97/131 (74.05%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: XP_023523461.1 (protein DETOXIFICATION 43-like [Cucurbita pepo subsp. pepo] >XP_023523462.1 protein DETOXIFICATION 43-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37 Identity = 97/131 (74.05%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: XP_022998417.1 (protein DETOXIFICATION 43-like [Cucurbita maxima]) HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35 Identity = 94/131 (71.76%), Postives = 97/131 (74.05%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: XP_022152644.1 (protein DETOXIFICATION 43-like [Momordica charantia]) HSP 1 Score: 154.5 bits (389), Expect = 2.1e-34 Identity = 90/131 (68.70%), Postives = 96/131 (73.28%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: KGN58591.1 (hypothetical protein Csa_3G696860 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 3.0e-33 Identity = 89/134 (66.42%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of Carg07324 vs. TAIR10
Match: AT1G51340.2 (MATE efflux family protein) HSP 1 Score: 71.6 bits (174), Expect = 3.2e-13 Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0
BLAST of Carg07324 vs. TAIR10
Match: AT3G08040.1 (MATE efflux family protein) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-10 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of Carg07324 vs. TAIR10
Match: AT2G38330.1 (MATE efflux family protein) HSP 1 Score: 47.8 bits (112), Expect = 5.0e-06 Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of Carg07324 vs. Swiss-Prot
Match: sp|Q9SYD6|DTX42_ARATH (Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 5.8e-12 Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0
BLAST of Carg07324 vs. Swiss-Prot
Match: sp|Q9SFB0|DTX43_ARATH (Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of Carg07324 vs. Swiss-Prot
Match: sp|Q84K71|DTX44_ARATH (Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 9.0e-05 Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of Carg07324 vs. TrEMBL
Match: tr|A0A0A0LEV2|A0A0A0LEV2_CUCSA (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_3G696860 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.0e-33 Identity = 89/134 (66.42%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of Carg07324 vs. TrEMBL
Match: tr|A0A1S3CG02|A0A1S3CG02_CUCME (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103500313 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.7e-32 Identity = 86/131 (65.65%), Postives = 92/131 (70.23%), Query Frame = 0
BLAST of Carg07324 vs. TrEMBL
Match: tr|A0A2K3NXA3|A0A2K3NXA3_TRIPR (Protein DETOXIFICATION OS=Trifolium pratense OX=57577 GN=L195_g004167 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.2e-23 Identity = 61/98 (62.24%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of Carg07324 vs. TrEMBL
Match: tr|A0A1S3CED3|A0A1S3CED3_CUCME (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103499923 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.0e-22 Identity = 67/131 (51.15%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of Carg07324 vs. TrEMBL
Match: tr|A0A0A0K8B8|A0A0A0K8B8_CUCSA (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_7G428170 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.7e-21 Identity = 65/131 (49.62%), Postives = 78/131 (59.54%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |