Carg27005-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27005-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Phosphatase 2C family protein
Location	Cucurbita_argyrosperma_scaffold_374 : 46106 .. 47432 (+)
Sequence length	430

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTATGATCGGTGCTTTCTTTGGGAAACTGAAGTAATCTTGTCTTTTAATCAATGTTTTTTTCTTTCTTGTGTTGCCATTTTATCTATTTTTGTTCTTGAAGCATGAAATGATGATGTCTGAACACATTTTTCTAGGATTATTCTCATCATCTGTTATACATCAGAGTTCAATTAATCATAACAACTGTGTCTAACCGTCCAAGCCCATCGCTAGCAGATATTGTTTTTTTTTAACTTTTCCGGTCAAGCTTCCCTTCAAAGTTTTTAATACGCGTCTACTAAGGAGAGATTTTCACACTCTTATAAAGAATGTTTTGTTCTCCTCTTCAACCGACATGGGATCTCACAATCCACCCCCATTGGGGCCCAACATCCTCCCTGGCACTCATTCCTCTCTCCAACCAATGTGGGATCTCACAATCCACCCTCCTCAGGGCCCAGCTCCCTTGTTTGTTGGCACTCGTTCCTCTCTCAAATCAATGTGAGATCTCACAATCCATTCTCCTTTGGGGCCCAGCTCTGGCACACCACTTGGTGTCTGGCTCTGATACCATTTATAACAGTCCAAATCCTCCGTTAGCAAATATTGTCCTCTTTGGCCTTTCCCTTTCAGGCTTCCCTTCAAGGTTTTTAAAACCCGTCTACTAGATAGAGGTTTCCACACCCTTATAAAGAATATTTCGTTTCCTCTCCAACCGATGTGAGATCTCACGTGGGATTTACTTGTTATCCCTCATTCAACTTAACTAAGACTTCCTAGGATTATTTTCCTCAATGTTGATATAAATGGTACTGTAATTAATTTATATAAATGTTGTAATTTCCATCTGAAAGTGACTTGAAACATGTTCACCATCACTTATTCTTGAACTTTCTCCTCTTTGAATGAAAATACAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAGTAATTTATCCCATAACATAGTGTATGTTGATAACTCTATATAGTTTTTTTTTTTTTTGTTCCCTCATCTGGCAGTG

mRNA sequence

ATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAGTAATTTATCCCATAACATAGTGTATGTTGATAACTCTATATAGTTTTTTTTTTTTTTGTTCCCTCATCTGGCAGTG

Coding sequence (CDS)

ATGTTATTACCATCAACTCCAAGGAAGAAGCAGAATGTGCTCACTTCTCTCTTTGGTAAATCTGCCAACAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGCTCTGCTATGCTTTCTGAAAGGTTAGGGAAAGATTTTCCTTCGGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGCAGATCAACCCGCAAATGAAAATTTGTCGATGAATTCGGGGCCGTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGCCCATTCCTCTGTGCAAAGTGTAGAAGAAAGAAAGACGCCATGGAAGGGAAAAGGCCAATAAAACCTACAATAACTGTTTAG

Protein sequence

MLLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV

Homology

[Close]

BLAST of Carg27005-RA vs. NCBI nr
Match: XP_022968729.1 (probable protein phosphatase 2C 5 [Cucurbita maxima] >XP_022968730.1 probable protein phosphatase 2C 5 [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 5.4e-60
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MLLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK 60
           +LLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK
Sbjct: 304 ILLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK 363

Query: 61  CAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV 118
           CAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV
Sbjct: 364 CAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV 420

[Close]

BLAST of Carg27005-RA vs. NCBI nr
Match: XP_023516112.1 (probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo] >XP_023516113.1 probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 9.3e-60
Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MLLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK 60
           +L+PSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK
Sbjct: 304 ILIPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK 363

Query: 61  CAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV 118
           CAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV
Sbjct: 364 CAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV 420

[Close]

BLAST of Carg27005-RA vs. NCBI nr
Match: XP_022961498.1 (probable protein phosphatase 2C 5 [Cucurbita moschata] >XP_022961499.1 probable protein phosphatase 2C 5 [Cucurbita moschata])

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-59
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MLLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK 60
           MLLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK
Sbjct: 304 MLLPSTPRKKQNVLTSLFGKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNSGIFK 363

Query: 61  CAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV 118
           CAVCQADQPANENLSMNS PFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV
Sbjct: 364 CAVCQADQPANENLSMNSEPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTITV 420

[Close]

BLAST of Carg27005-RA vs. NCBI nr
Match: XP_004135583.1 (PREDICTED: probable protein phosphatase 2C 5 [Cucumis sativus] >XP_011659677.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis sativus] >XP_011659683.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis sativus] >KGN66026.1 hypothetical protein Csa_1G568550 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 5.3e-55
Identity = 110/124 (88.71%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 2   LLPSTPRKKQNVLTSLF--------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSD 61
           L+PSTPRKKQNVLTS F        GKSANKLSAVGVVEELFEEGSAML+ERLGKDFPSD
Sbjct: 305 LIPSTPRKKQNVLTSFFGKKYPNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSD 364

Query: 62  PNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKP 118
           PNSGIFKCAVCQADQP NENLSMNSGPFFSPSSKPWEGPFLCA CR+KKDAMEGKRPIKP
Sbjct: 365 PNSGIFKCAVCQADQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKP 424

[Close]

BLAST of Carg27005-RA vs. NCBI nr
Match: XP_008450571.1 (PREDICTED: probable protein phosphatase 2C 5 [Cucumis melo] >XP_008450573.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis melo] >XP_008450574.1 PREDICTED: probable protein phosphatase 2C 5 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54
Identity = 110/125 (88.00%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 1   MLLPSTPRKKQNVLTSLF--------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPS 60
           +L PSTPRKKQNVLTS F        GKSANKLSAVGVVEELFEEGSAML+ERLGKDFPS
Sbjct: 304 ILSPSTPRKKQNVLTSFFGKKYPSSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPS 363

Query: 61  DPNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIK 118
           DPNSGIFKCAVCQADQP NENLSMNSGPFFSPSSKPWEGPFLCA CR+KKDAMEGKRPIK
Sbjct: 364 DPNSGIFKCAVCQADQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIK 423

[Close]

BLAST of Carg27005-RA vs. TAIR10
Match: AT1G09160.2 (Protein phosphatase 2C family protein)

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-33
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 3   LPSTPRKKQNVLTSLF---------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSD 62
           L   P KKQN  TS            K+ NKLSAVGVVEELFEEGSA+L++RLGKD  S+
Sbjct: 305 LAPAPMKKQNPFTSFLSRKNHMDTNNKNGNKLSAVGVVEELFEEGSAVLADRLGKDLLSN 364

Query: 63  PNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKP 117
             +G+ KCAVCQ D+  +E+LS N G   S +SK WEGPFLC  C++KKDAMEGKRP K 
Sbjct: 365 TETGLLKCAVCQIDESPSEDLSSNGGSIISSASKRWEGPFLCTICKKKKDAMEGKRPSKG 424

[Close]

BLAST of Carg27005-RA vs. TAIR10
Match: AT1G68410.1 (Protein phosphatase 2C family protein)

HSP 1 Score: 114.8 bits (286), Expect = 3.7e-26
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 24  KLSAVGVVEELFEEGSAMLSERLGK---DFPSDPNSGIFKCAVCQADQPANENLSMNSGP 83
           KLS VG+VEELFEEGSAML+ERLG       S    GIF CA+CQ D   +E +S+++G 
Sbjct: 341 KLSTVGIVEELFEEGSAMLAERLGSGDCSKESTTGGGIFTCAICQLDLAPSEGISVHAGS 400

Query: 84  FFSPSSKPWEGPFLCAKCRRKKDAMEGKRP 111
            FS S KPW+GPFLC  CR KKDAMEGKRP
Sbjct: 401 IFSTSLKPWQGPFLCTDCRDKKDAMEGKRP 430

[Close]

BLAST of Carg27005-RA vs. TAIR10
Match: AT1G47380.1 (Protein phosphatase 2C family protein)

HSP 1 Score: 94.0 bits (232), Expect = 6.7e-20
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 3   LPSTPRKKQNVLTSLFGKSANKLSA--------VGVVEELFEEGSAMLSERLGKDFPSDP 62
           +P   ++ + +L S+F +  +  S+          VVEELFEEGSAMLSERL   +P   
Sbjct: 303 VPPPKKQGKGMLKSMFKRKTSDSSSNIEKEYAEPDVVEELFEEGSAMLSERLDTKYPLCN 362

Query: 63  NSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKR 110
              +F CAVCQ +    E +S+++G       +PW+GPFLCA C+ KKDAMEGKR
Sbjct: 363 MFKLFMCAVCQVEVKPGEGVSIHAGSDNCRKLRPWDGPFLCASCQDKKDAMEGKR 417

[Close]

BLAST of Carg27005-RA vs. Swiss-Prot
Match: sp|O80492|P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana OX=3702 GN=At1g09160 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-32
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 3   LPSTPRKKQNVLTSLF---------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSD 62
           L   P KKQN  TS            K+ NKLSAVGVVEELFEEGSA+L++RLGKD  S+
Sbjct: 305 LAPAPMKKQNPFTSFLSRKNHMDTNNKNGNKLSAVGVVEELFEEGSAVLADRLGKDLLSN 364

Query: 63  PNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKP 117
             +G+ KCAVCQ D+  +E+LS N G   S +SK WEGPFLC  C++KKDAMEGKRP K 
Sbjct: 365 TETGLLKCAVCQIDESPSEDLSSNGGSIISSASKRWEGPFLCTICKKKKDAMEGKRPSKG 424

[Close]

BLAST of Carg27005-RA vs. Swiss-Prot
Match: sp|Q0JMD4|P2C03_ORYSJ (Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0513100 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-26
Identity = 63/117 (53.85%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 4   PSTPRKKQNVLTSLF--------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPS-DP 63
           PS P+K   + + +F         K   +LSA G+VEELFEEGSAMLSERLG D      
Sbjct: 363 PSPPKKINKLKSLIFRKKTKDHPNKLTKQLSAAGMVEELFEEGSAMLSERLGNDSSGRRT 422

Query: 64  NSGIFKCAVCQADQPANENLSMNSGPFF-SPSSKPWEGPFLCAKCRRKKDAMEGKRP 111
           +S +F CA+CQ D   +E +S+++G  F S SSKPWEGPFLC+ CR KKDAMEGKRP
Sbjct: 423 SSSLFTCAICQVDLEPSEGISVHAGSIFSSSSSKPWEGPFLCSDCRDKKDAMEGKRP 479

[Close]

BLAST of Carg27005-RA vs. Swiss-Prot
Match: sp|Q9M9C6|P2C15_ARATH (Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68410 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 24  KLSAVGVVEELFEEGSAMLSERLGK---DFPSDPNSGIFKCAVCQADQPANENLSMNSGP 83
           KLS VG+VEELFEEGSAML+ERLG       S    GIF CA+CQ D   +E +S+++G 
Sbjct: 341 KLSTVGIVEELFEEGSAMLAERLGSGDCSKESTTGGGIFTCAICQLDLAPSEGISVHAGS 400

Query: 84  FFSPSSKPWEGPFLCAKCRRKKDAMEGKRP 111
            FS S KPW+GPFLC  CR KKDAMEGKRP
Sbjct: 401 IFSTSLKPWQGPFLCTDCRDKKDAMEGKRP 430

[Close]

BLAST of Carg27005-RA vs. Swiss-Prot
Match: sp|Q10MN6|P2C33_ORYSJ (Probable protein phosphatase 2C 33 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301700 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25
Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 6   TPRKKQNVLTSLF---------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPNS 65
           +P+K QN L SL          GK  NK ++   VEELFEEGSAML ERLG++FPS  NS
Sbjct: 311 SPKKNQNKLRSLLFGRRSHSSVGKLGNKSASFDSVEELFEEGSAMLDERLGRNFPSKANS 370

Query: 66  GIFKCAVCQADQ-PANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPT 115
              +CA+CQ DQ P  + ++ N G   S  S PW GP+LC+ CR+KKDAMEGKR  + T
Sbjct: 371 SPSRCAICQVDQAPFEDLVTDNGGGCCSAPSTPWVGPYLCSDCRKKKDAMEGKRSSRST 429

[Close]

BLAST of Carg27005-RA vs. Swiss-Prot
Match: sp|Q9FX08|P2C12_ARATH (Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana OX=3702 GN=At1g47380 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 3   LPSTPRKKQNVLTSLFGKSANKLSA--------VGVVEELFEEGSAMLSERLGKDFPSDP 62
           +P   ++ + +L S+F +  +  S+          VVEELFEEGSAMLSERL   +P   
Sbjct: 303 VPPPKKQGKGMLKSMFKRKTSDSSSNIEKEYAEPDVVEELFEEGSAMLSERLDTKYPLCN 362

Query: 63  NSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKR 110
              +F CAVCQ +    E +S+++G       +PW+GPFLCA C+ KKDAMEGKR
Sbjct: 363 MFKLFMCAVCQVEVKPGEGVSIHAGSDNCRKLRPWDGPFLCASCQDKKDAMEGKR 417

[Close]

BLAST of Carg27005-RA vs. TrEMBL
Match: tr|A0A0A0M1G5|A0A0A0M1G5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568550 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.5e-55
Identity = 110/124 (88.71%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 2   LLPSTPRKKQNVLTSLF--------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPSD 61
           L+PSTPRKKQNVLTS F        GKSANKLSAVGVVEELFEEGSAML+ERLGKDFPSD
Sbjct: 305 LIPSTPRKKQNVLTSFFGKKYPNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSD 364

Query: 62  PNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKP 118
           PNSGIFKCAVCQADQP NENLSMNSGPFFSPSSKPWEGPFLCA CR+KKDAMEGKRPIKP
Sbjct: 365 PNSGIFKCAVCQADQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKP 424

[Close]

BLAST of Carg27005-RA vs. TrEMBL
Match: tr|A0A1S3BPJ4|A0A1S3BPJ4_CUCME (probable protein phosphatase 2C 5 OS=Cucumis melo OX=3656 GN=LOC103492128 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.7e-55
Identity = 110/125 (88.00%), Postives = 113/125 (90.40%), Query Frame = 0


Query: 1   MLLPSTPRKKQNVLTSLF--------GKSANKLSAVGVVEELFEEGSAMLSERLGKDFPS 60
           +L PSTPRKKQNVLTS F        GKSANKLSAVGVVEELFEEGSAML+ERLGKDFPS
Sbjct: 304 ILSPSTPRKKQNVLTSFFGKKYPSSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPS 363

Query: 61  DPNSGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIK 118
           DPNSGIFKCAVCQADQP NENLSMNSGPFFSPSSKPWEGPFLCA CR+KKDAMEGKRPIK
Sbjct: 364 DPNSGIFKCAVCQADQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIK 423

[Close]

BLAST of Carg27005-RA vs. TrEMBL
Match: tr|A0A2G3AXQ1|A0A2G3AXQ1_CAPCH (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_32147 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-48
Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 2   LLPSTPRKKQNVLTS-LFGK-----SANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPN 61
           +LP TPRKKQNVLTS LFG+      +NKLSAVGVVEELFEEGSAML+ERLGKDFP DPN
Sbjct: 305 ILPPTPRKKQNVLTSFLFGRRSQNARSNKLSAVGVVEELFEEGSAMLAERLGKDFPLDPN 364

Query: 62  SGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTI 117
           SG+F+CAVCQADQP +E LS+NSGPFFSP+SKPWEGPFLCA CRRKKDAMEGKRP +PTI
Sbjct: 365 SGLFRCAVCQADQPPSEGLSVNSGPFFSPASKPWEGPFLCATCRRKKDAMEGKRPSRPTI 424

[Close]

BLAST of Carg27005-RA vs. TrEMBL
Match: tr|A0A2G2XYA8|A0A2G2XYA8_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_33682 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-48
Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 2   LLPSTPRKKQNVLTS-LFGK-----SANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPN 61
           +LP TPRKKQNVLTS LFG+      +NKLSAVGVVEELFEEGSAML+ERLGKDFP DPN
Sbjct: 322 ILPPTPRKKQNVLTSFLFGRRSQNARSNKLSAVGVVEELFEEGSAMLAERLGKDFPLDPN 381

Query: 62  SGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTI 117
           SG+F+CAVCQADQP +E LS+NSGPFFSP+SKPWEGPFLCA CRRKKDAMEGKRP +PTI
Sbjct: 382 SGLFRCAVCQADQPPSEGLSVNSGPFFSPASKPWEGPFLCATCRRKKDAMEGKRPSRPTI 441

[Close]

BLAST of Carg27005-RA vs. TrEMBL
Match: tr|A0A2G2V7U9|A0A2G2V7U9_CAPBA (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_31338 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-48
Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 2   LLPSTPRKKQNVLTS-LFGK-----SANKLSAVGVVEELFEEGSAMLSERLGKDFPSDPN 61
           +LP TPRKKQNVLTS LFG+      +NKLSAVGVVEELFEEGSAML+ERLGKDFP DPN
Sbjct: 305 ILPPTPRKKQNVLTSFLFGRRSQNARSNKLSAVGVVEELFEEGSAMLAERLGKDFPLDPN 364

Query: 62  SGIFKCAVCQADQPANENLSMNSGPFFSPSSKPWEGPFLCAKCRRKKDAMEGKRPIKPTI 117
           SG+F+CAVCQADQP +E LS+NSGPFFSP+SKPWEGPFLCA CRRKKDAMEGKRP +PTI
Sbjct: 365 SGLFRCAVCQADQPPSEGLSVNSGPFFSPASKPWEGPFLCATCRRKKDAMEGKRPSRPTI 424

The following BLAST results are available for this feature:

BLAST of Carg27005-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968729.1	5.4e-60	99.15	probable protein phosphatase 2C 5 [Cucurbita maxima] >XP_022968730.1 probable pr...	[more]
XP_023516112.1	9.3e-60	98.29	probable protein phosphatase 2C 5 [Cucurbita pepo subsp. pepo] >XP_023516113.1 p...	[more]
XP_022961498.1	1.6e-59	99.15	probable protein phosphatase 2C 5 [Cucurbita moschata] >XP_022961499.1 probable ...	[more]
XP_004135583.1	5.3e-55	88.71	PREDICTED: probable protein phosphatase 2C 5 [Cucumis sativus] >XP_011659677.1 P...	[more]
XP_008450571.1	1.2e-54	88.00	PREDICTED: probable protein phosphatase 2C 5 [Cucumis melo] >XP_008450573.1 PRED...	[more]

BLAST of Carg27005-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09160.2	1.8e-33	56.91	Protein phosphatase 2C family protein	[more]
AT1G68410.1	3.7e-26	62.22	Protein phosphatase 2C family protein	[more]
AT1G47380.1	6.7e-20	43.48	Protein phosphatase 2C family protein	[more]

BLAST of Carg27005-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80492\|P2C05_ARATH	3.3e-32	56.91	Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana OX=3702 GN=At1g09160 P...	[more]
sp\|Q0JMD4\|P2C03_ORYSJ	7.8e-26	53.85	Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]
sp\|Q9M9C6\|P2C15_ARATH	6.6e-25	62.22	Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68410 ...	[more]
sp\|Q10MN6\|P2C33_ORYSJ	6.6e-25	51.26	Probable protein phosphatase 2C 33 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
sp\|Q9FX08\|P2C12_ARATH	1.2e-18	43.48	Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana OX=3702 GN=At1g47380 ...	[more]

BLAST of Carg27005-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M1G5\|A0A0A0M1G5_CUCSA	3.5e-55	88.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568550 PE=4 SV=1	[more]
tr\|A0A1S3BPJ4\|A0A1S3BPJ4_CUCME	7.7e-55	88.00	probable protein phosphatase 2C 5 OS=Cucumis melo OX=3656 GN=LOC103492128 PE=4 S...	[more]
tr\|A0A2G3AXQ1\|A0A2G3AXQ1_CAPCH	3.2e-48	80.99	Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_32147 PE=4 SV=1	[more]
tr\|A0A2G2XYA8\|A0A2G2XYA8_CAPAN	3.2e-48	80.99	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_33682 PE=4 SV=1	[more]
tr\|A0A2G2V7U9\|A0A2G2V7U9_CAPBA	3.2e-48	80.99	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_31338 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg27005	Carg27005	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27005-RA.exon.1	Carg27005-RA.exon.1	exon
Carg27005-RA.exon.2	Carg27005-RA.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27005-RA.CDS.1	Carg27005-RA.CDS.1	CDS
Carg27005-RA.CDS.2	Carg27005-RA.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27005-RA.three_prime_UTR.1	Carg27005-RA.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg27005-RA	Carg27005-RA-protein	polypeptide