Carg21398 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATTTCCTCGCGGATTGCTGCAGTCGCCGCTGTCTATTGCTCGGTCGCCGTCATTTTTCTTGCCGGAGGCTCAAATGCTAGGGACTTGCGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCTGGCGCTATTGAAAACTCCTCGCCGGATATGCAATCTTTCTTCAAAGGAAACTCCTGGTCTTCTTCCGATGTCGCGCTTCCGAAGGCGATGAACACTAGCCTGCCGTCGCAGTGGTGGAATCGTAGCCACCGTGACCGCTCTGGAGCCGCTGCCGATGGAGGCGGCGGAGACCACATTCGTGGCGCATTGCTTGTGGCGAGTCTGGTATGTGGAGTTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACGTCTTCAAGTTCAGGAAACAGAATAGATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATTGCTAACAAGTGA ATGGTGATTTCCTCGCGGATTGCTGCAGTCGCCGCTGTCTATTGCTCGGTCGCCGTCATTTTTCTTGCCGGAGGCTCAAATGCTAGGGACTTGCGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCTGGCGCTATTGAAAACTCCTCGCCGGATATGCAATCTTTCTTCAAAGGAAACTCCTGGTCTTCTTCCGATGTCGCGCTTCCGAAGGCGATGAACACTAGCCTGCCGTCGCAGTGGTGGAATCGTAGCCACCGTGACCGCTCTGGAGCCGCTGCCGATGGAGGCGGCGGAGACCACATTCGTGGCGCATTGCTTGTGGCGAGTCTGGTATGTGGAGTTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACGTCTTCAAGTTCAGGAAACAGAATAGATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATTGCTAACAAGTGA ATGGTGATTTCCTCGCGGATTGCTGCAGTCGCCGCTGTCTATTGCTCGGTCGCCGTCATTTTTCTTGCCGGAGGCTCAAATGCTAGGGACTTGCGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCTGGCGCTATTGAAAACTCCTCGCCGGATATGCAATCTTTCTTCAAAGGAAACTCCTGGTCTTCTTCCGATGTCGCGCTTCCGAAGGCGATGAACACTAGCCTGCCGTCGCAGTGGTGGAATCGTAGCCACCGTGACCGCTCTGGAGCCGCTGCCGATGGAGGCGGCGGAGACCACATTCGTGGCGCATTGCTTGTGGCGAGTCTGGTATGTGGAGTTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACGTCTTCAAGTTCAGGAAACAGAATAGATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATTGCTAACAAGTGA MVISSRIAAVAAVYCSVAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSDVALPKAMNTSLPSQWWNRSHRDRSGAAADGGGGDHIRGALLVASLVCGVIGVSLLIASAFIYVFKFRKQNRSSSSLSVSETTNIIANK
BLAST of Carg21398 vs. NCBI nr
Match: XP_022927447.1 (uncharacterized protein LOC111434271 [Cucurbita moschata]) HSP 1 Score: 268.1 bits (684), Expect = 1.9e-68 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg21398 vs. NCBI nr
Match: XP_023519911.1 (uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265.4 bits (677), Expect = 1.2e-67 Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Carg21398 vs. NCBI nr
Match: XP_023000949.1 (uncharacterized protein LOC111495232 [Cucurbita maxima]) HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64 Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0
BLAST of Carg21398 vs. NCBI nr
Match: XP_022954449.1 (uncharacterized protein LOC111456713 [Cucurbita moschata] >XP_023542159.1 uncharacterized protein LOC111802125 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.4 bits (490), Expect = 5.9e-46 Identity = 108/155 (69.68%), Postives = 119/155 (76.77%), Query Frame = 0
BLAST of Carg21398 vs. NCBI nr
Match: XP_008445240.1 (PREDICTED: uncharacterized protein LOC103488324 [Cucumis melo]) HSP 1 Score: 181.4 bits (459), Expect = 2.3e-42 Identity = 115/155 (74.19%), Postives = 127/155 (81.94%), Query Frame = 0
BLAST of Carg21398 vs. TAIR10
Match: AT4G21740.1 (unknown protein) HSP 1 Score: 42.0 bits (97), Expect = 4.0e-04 Identity = 38/116 (32.76%), Postives = 51/116 (43.97%), Query Frame = 0
BLAST of Carg21398 vs. TrEMBL
Match: tr|A0A1S3BC63|A0A1S3BC63_CUCME (uncharacterized protein LOC103488324 OS=Cucumis melo OX=3656 GN=LOC103488324 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42 Identity = 115/155 (74.19%), Postives = 127/155 (81.94%), Query Frame = 0
BLAST of Carg21398 vs. TrEMBL
Match: tr|A0A0A0LVV5|A0A0A0LVV5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538210 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.0e-38 Identity = 108/151 (71.52%), Postives = 122/151 (80.79%), Query Frame = 0
BLAST of Carg21398 vs. TrEMBL
Match: tr|A0A067KFC4|A0A067KFC4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09219 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of Carg21398 vs. TrEMBL
Match: tr|A0A2I4H4I8|A0A2I4H4I8_9ROSI (uncharacterized protein LOC109013441 OS=Juglans regia OX=51240 GN=LOC109013441 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-16 Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 0
BLAST of Carg21398 vs. TrEMBL
Match: tr|A0A1R3HUC9|A0A1R3HUC9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26835 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.3e-16 Identity = 58/128 (45.31%), Postives = 77/128 (60.16%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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