Carg26219 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAACTTACTTCCCAAAGTTTGGTGGGCAAAAGAACATATAGGCATTCACATAAACTTAAATTTCCCTGTGGATGTTTCAACCCTCCCTCTCATTACAGTTTTTCCTAAACTTCTGCCATCCTCAGTTCTCTATCTTCTTCCTGTTTCAGTGCTGCCTCTAATCTTTAGAGGAAACATGAACAATCATCGTCAGCAGAAACATGCCAAACTCCCTCCACTAGAATCTGAAGGTTTTAACTCGATTGTCTCTACTTTCCATGTCCTATTACTCAATCCTGGAATTCGTCTCTTCATGATCTTCTCACTTTCTAATGATATTTGAAGTCCTACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTAAGTTGGGTTCAAGGAAACCCAGATTTTTCAGCAAGAATGGATATAGATTCTGCTCCATCTCTCCTTCTAGTATCTGAGTTACTAAGAAAATGGCTTTTCCTTTCAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGAGAGAGACAGAGAGATAT ACAAACTTACTTCCCAAAGTTTGGTGGGCAAAAGAACATATAGGCATTCACATAAACTTAAATTTCCCTGTGGATGTTTCAACCCTCCCTCTCATTACAGTTTTTCCTAAACTTCTGCCATCCTCAGTTCTCTATCTTCTTCCTGTTTCAGTGCTGCCTCTAATCTTTAGAGGAAACATGAACAATCATCGTCAGCAGAAACATGCCAAACTCCCTCCACTAGAATCTGAAGGTTTTAACTCGATTGTCTCTACTTTCCATGTCCTATTACTCAATCCTGGAATTCGTCTCTTCATGATCTTCTCACTTTCTAATGATATTTGAAGTCCTACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGAGAGAGACAGAGAGATAT ATGATATTTGAAGTCCTACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGA MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG
BLAST of Carg26219 vs. NCBI nr
Match: XP_023534743.1 (transcription factor TRY-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.1 bits (370), Expect = 2.6e-32 Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of Carg26219 vs. NCBI nr
Match: XP_016898876.1 (PREDICTED: transcription factor TRY [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Carg26219 vs. NCBI nr
Match: XP_004145923.1 (PREDICTED: transcription factor TRY [Cucumis sativus] >XP_011654628.1 PREDICTED: transcription factor TRY [Cucumis sativus] >AET79925.1 R3 MYB transcription factor [Cucumis sativus] >KGN49883.1 hypothetical protein Csa_5G139610 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Carg26219 vs. NCBI nr
Match: XP_022973073.1 (transcription factor TRY-like [Cucurbita maxima] >XP_023549596.1 transcription factor TRY-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Carg26219 vs. NCBI nr
Match: XP_022922339.1 (transcription factor TRY-like [Cucurbita moschata]) HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29 Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of Carg26219 vs. TAIR10
Match: AT5G53200.1 (Homeodomain-like superfamily protein) HSP 1 Score: 107.1 bits (266), Expect = 5.3e-24 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Carg26219 vs. TAIR10
Match: AT2G46410.1 (Homeodomain-like superfamily protein) HSP 1 Score: 96.3 bits (238), Expect = 9.4e-21 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Carg26219 vs. TAIR10
Match: AT2G30420.1 (Homeodomain-like superfamily protein) HSP 1 Score: 93.6 bits (231), Expect = 6.1e-20 Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0
BLAST of Carg26219 vs. TAIR10
Match: AT2G30424.1 (Homeodomain-like superfamily protein) HSP 1 Score: 93.2 bits (230), Expect = 8.0e-20 Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of Carg26219 vs. TAIR10
Match: AT2G30432.1 (Homeodomain-like superfamily protein) HSP 1 Score: 89.0 bits (219), Expect = 1.5e-18 Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of Carg26219 vs. Swiss-Prot
Match: sp|Q8GV05|TRY_ARATH (Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 9.6e-23 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Carg26219 vs. Swiss-Prot
Match: sp|O22059|CPC_ARATH (Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-19 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Carg26219 vs. Swiss-Prot
Match: sp|Q84RD1|ETC2_ARATH (MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-18 Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0
BLAST of Carg26219 vs. Swiss-Prot
Match: sp|B3H4X8|TCL2_ARATH (MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.4e-18 Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of Carg26219 vs. Swiss-Prot
Match: sp|D3GKW6|TCL1_ARATH (MYB-like transcription factor TCL1 OS=Arabidopsis thaliana OX=3702 GN=TCL1 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-17 Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of Carg26219 vs. TrEMBL
Match: tr|I6NF75|I6NF75_CUCSA (R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Carg26219 vs. TrEMBL
Match: tr|A0A1S4DSB1|A0A1S4DSB1_CUCME (transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Carg26219 vs. TrEMBL
Match: tr|M0UAN2|M0UAN2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103974532 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.8e-21 Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of Carg26219 vs. TrEMBL
Match: tr|M0TRZ1|M0TRZ1_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103995061 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.3e-21 Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
BLAST of Carg26219 vs. TrEMBL
Match: tr|A0A2G5CTG8|A0A2G5CTG8_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03700095v1 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-21 Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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