Carg11522 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGAGAAACGGAACGTAGATTCCCGGCGTCGATAAAAATTTGCCCCATTTATTTTCTAGGGCTTCCAGGTTTCCCGCGAGATTATGGAAGCTGAAGGTAACCGTTGTTGAATTCCTTTCCAATTTTGCATTTTCTTCTCAATTTGAATTTGTTGATCAATTGCTTCATTCACTCTCTTAGATTACGGAAAAATGTGCTTCAGGTCAAAAGACAGCCACAAATCCGTCTGCAATGCTTGCTGGTCTTCTTACCAGGAGGGCAAAGCTCCACGACGAGCTTCGGAGTATTGAGAAACAGGTTTGCTTTGATTCCTTGACAAGAGTTTTGGAATTTCTGTGCTTCTGATTTATGAATATGAACTTGACAGTGTCTTTTAGAGGCTTTTTGTCTCGATTCTAGTTGGGTTCCTACGCTTTTATAGTTGTTACGTTTTTTGCCACTTGTTTTTTGAAATCTTGCGTCACTTGTTCTGAATTCACTGTCACACTTGTTCTATGAAACCACATACGCTAAAGATTAGTTTCACTGCATTAGCCAGCAACAACCGAGCTTTACTTTTAAGCCGTACTCCAGTTAGCGGCGGGAGAGTATTTTCCTTTTATATTCTATCAAATACCTGTGGAATATCAAAGGTCTTAAGAAGCGTTCTCCCAACACTTTTCCAGTGTAGAAAGTAATTTTCACCTCCCTTTTAATTTTTGAACAAGAAATGGAGACTTTTGTTGATATTATTATTTGTAAAGTTACAATAAGTTTGAATCCTTCTTTCAGGAGAAGTTAAAGTACAATAGCTTACCCTGTTAACCAAACAAGCAGTGTTGTATTCTAAGAAAAATAATAGGATTGCTTCTTTGGTTTAACTTCCATCTAATTTTAATTCATATATCCGGTAAAATATGCAGGTTTATGACATGGAGACAAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAGGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTGTATGGAGTGTCTATAATATTATTTTGCAGAAATTTTTTCATATTAGTTCTCGTTATTCATGCATGTTACCTGTCTTAACACATGAAGATTTACGTTTACTGAGTTCTAATTTAGTGATGGGATCAATAAAATACTCTCTTTCCAATTGAAATATAATTTAGAAAAAATCACACTTTTGATCTCTGAAACTTTGATTTAAGTTCTAAACTAACTTCTGTTTAGTCCATAAAGTTGTAAAAGTGACACTTCAGTTCTTAAGAGGAGATTTGGGCTGTGGTGGTCATTTAATGTTCATTTTTTTTTACAAAATGTTTCCCTTTTTTATTGTAAAGTCATTCTTATCGTACTCTGCTTCATTTTAATGGAAGGCTATTTTTTTAAGTAAAAAACAAATGTAAGTGAGGTAAAGTTTATGAATACTTGTGGATGCAGTTTAAAGCGGTCTAGGAAGTTTCAGCTTGAAGATAGGCTCTTCTCACTGTCTTCTGTTACCTCCCCTGCTGTATGTACTTCGATTCTTAACCTGTGTCTGAAGTGGAAATTTAGTTGTGTGATACAAGAGATATATTTTTTCATGTAAAACAAATGTAAACTAGCTTTTAAAAATTTTTATTTACAAATGATAAATGCATCTAGAGGGCTAAAACAAGGACATCCTATTTGGTATAAGGTCTTAAGTTTGGGGCTAATAAGATATTCAGATTGATGGGATCCATTTTAGTGTATGCTTTGCTATCTAGGATCTGAAGCATTAGCCATTTGCCTTTATATTTGTATTCTAGAAACTTCTGGTATTTGGACTAAATTGGATTCTTCACTTTTCGCTTATAGAGATTATCATGGAACTTTTTTATTATACTTTCTTCAAAGGAAAAATTAATGTTTTATGTAATTATGTGTTTAGGGTATTTGTACTTCAGGCCGAGTACTTTAATTTCCCCTTTTCTCGTATTTTACAACCTCCCACTGTCATAACCTTTCTTCCTCTCCCCATAGTTTCTAGTGTAGTTTTGTGAGATCCCAAGTTGATTGGAGATGGTAACGAAACCTTCCTTATAAGGGTGTGGAAAACCTCTCCCTAGTAGATGCGTTTTAAAACCATGAAACTGACAACAATACGTAACAGGCCAAAGTAGACAATATATGTTAGTGGTGGGCTTTGAGCTGTTACAAATGATATTAGAGTCAGACACCGGACGGTGTGCCAGCGAGGACGCCGGACCCCCAAAAAGGGTGGATTGTGAGATCCCACATTAGTTGGAATCCTCTCCCTAGTAGAGGCATATTAAAACCGTGAGGATGACGGCGATACCTAATAGGCCAAATCGGACAATATCTACTAGGGTGAGCTTGAGCGGTTACAAATTTGCTCTTGATTTCATATTCTACTGTTCTTTTTCGCTTTAATTTTCAGGCTGAAGAGCTTGCAGCTGGACGTGATGGTGAGTCTTAACGCTAAGATAAATTCTTCTGATTTTTTGTGATTAAGTTTTATCGTCTTCTTTTGTGAACCTTGTTGCAGATGGGAGATCCGACTTAGGTCCTGGCAGATCTAAAGGCGGTGGCATATATTCCAATGGACAGTTAGTATTCTGCCAATTTTCTCCTTCCTTAACTTCTCTGAACCCTGTAACTATCTTACTTTGTAAAGCTTTGAAGGTGTTTTATCTTCAGATAGTTTGTACGTAAATTTGTGCATTTCATGTGCAGAGGGAAACCCAAAAAGGGAAGACCGACACCGAGGGATGCGAAGAGAATGAGACAATCAAGCGAGCAAGATTTTGACTATGACGATGATCCGGACTCGACGTTGTGAATGCTGTAAATGAAGCCTCTAATGGCAGCATCTACAGAAATCCATGGACTCGGCTCATCCTTACGGAGGCCAACGTAGGGAAGTGTAGCTATTTATCTGTGTTTCATCATGCTTGTTTAGATTATAAATGTAGGGGATACGGTTCGGATCTTCGATCTATCATTAGCCATGTGAGTGATTCTCTTATTCTATATTTTTCACCTTGAATATC AATGAGAAACGGAACGTAGATTCCCGGCGTCGATAAAAATTTGCCCCATTTATTTTCTAGGGCTTCCAGGTTTCCCGCGAGATTATGGAAGCTGAAGGTCAAAAGACAGCCACAAATCCGTCTGCAATGCTTGCTGGTCTTCTTACCAGGAGGGCAAAGCTCCACGACGAGCTTCGGAGTATTGAGAAACAGGTTTATGACATGGAGACAAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAGGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTTTTAAAGCGGTCTAGGAAGTTTCAGCTTGAAGATAGGCTCTTCTCACTGTCTTCTGTTACCTCCCCTGCTGTATGGTATTTGTACTTCAGGCCGAATGGGAGATCCGACTTAGGTCCTGGCAGATCTAAAGGCGGTGGCATATATTCCAATGGACAAGGGAAACCCAAAAAGGGAAGACCGACACCGAGGGATGCGAAGAGAATGAGACAATCAAGCGAGCAAGATTTTGACTATGACGATGATCCGGACTCGACGTTGTGAATGCTGTAAATGAAGCCTCTAATGGCAGCATCTACAGAAATCCATGGACTCGGCTCATCCTTACGGAGGCCAACGTAGGGAAGTGTAGCTATTTATCTGTGTTTCATCATGCTTGTTTAGATTATAAATGTAGGGGATACGGTTCGGATCTTCGATCTATCATTAGCCATGTGAGTGATTCTCTTATTCTATATTTTTCACCTTGAATATC ATGGAAGCTGAAGGTCAAAAGACAGCCACAAATCCGTCTGCAATGCTTGCTGGTCTTCTTACCAGGAGGGCAAAGCTCCACGACGAGCTTCGGAGTATTGAGAAACAGGTTTATGACATGGAGACAAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAGGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTACTGCTCTTTTAAAGCGGTCTAGGAAGTTTCAGCTTGAAGATAGGCTCTTCTCACTGTCTTCTGTTACCTCCCCTGCTGTATGGTATTTGTACTTCAGGCCGAATGGGAGATCCGACTTAGGTCCTGGCAGATCTAAAGGCGGTGGCATATATTCCAATGGACAAGGGAAACCCAAAAAGGGAAGACCGACACCGAGGGATGCGAAGAGAATGAGACAATCAAGCGAGCAAGATTTTGACTATGACGATGATCCGGACTCGACGTTGTGA MEAEGQKTATNPSAMLAGLLTRRAKLHDELRSIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAVWYLYFRPNGRSDLGPGRSKGGGIYSNGQGKPKKGRPTPRDAKRMRQSSEQDFDYDDDPDSTL
BLAST of Carg11522 vs. NCBI nr
Match: XP_022954305.1 (chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 279.6 bits (714), Expect = 6.3e-72 Identity = 148/157 (94.27%), Postives = 149/157 (94.90%), Query Frame = 0
BLAST of Carg11522 vs. NCBI nr
Match: XP_022959661.1 (chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita moschata] >XP_022959662.1 chromatin modification-related protein MEAF6-like isoform X2 [Cucurbita moschata] >XP_023515245.1 chromatin modification-related protein MEAF6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274.6 bits (701), Expect = 2.0e-70 Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg11522 vs. NCBI nr
Match: XP_022143603.1 (chromatin modification-related protein MEAF6 [Momordica charantia]) HSP 1 Score: 274.2 bits (700), Expect = 2.6e-70 Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0
BLAST of Carg11522 vs. NCBI nr
Match: XP_023004365.1 (chromatin modification-related protein MEAF6-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 273.5 bits (698), Expect = 4.5e-70 Identity = 143/157 (91.08%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg11522 vs. NCBI nr
Match: XP_011659255.1 (PREDICTED: chromatin modification-related protein MEAF6 [Cucumis sativus] >KGN44737.1 hypothetical protein Csa_7G375790 [Cucumis sativus]) HSP 1 Score: 268.5 bits (685), Expect = 1.5e-68 Identity = 142/157 (90.45%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of Carg11522 vs. TAIR10
Match: AT4G14385.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 170.2 bits (430), Expect = 9.8e-43 Identity = 98/156 (62.82%), Postives = 118/156 (75.64%), Query Frame = 0
BLAST of Carg11522 vs. Swiss-Prot
Match: sp|Q58CU0|EAF6_BOVIN (Chromatin modification-related protein MEAF6 OS=Bos taurus OX=9913 GN=MEAF6 PE=2 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Carg11522 vs. Swiss-Prot
Match: sp|Q5ZIX3|EAF6_CHICK (Chromatin modification-related protein MEAF6 OS=Gallus gallus OX=9031 GN=MEAF6 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Carg11522 vs. Swiss-Prot
Match: sp|Q9HAF1|EAF6_HUMAN (Chromatin modification-related protein MEAF6 OS=Homo sapiens OX=9606 GN=MEAF6 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Carg11522 vs. Swiss-Prot
Match: sp|Q2VPQ9|EAF6_MOUSE (Chromatin modification-related protein MEAF6 OS=Mus musculus OX=10090 GN=Meaf6 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Carg11522 vs. Swiss-Prot
Match: sp|Q52KD8|EAF6_XENLA (Chromatin modification-related protein MEAF6 OS=Xenopus laevis OX=8355 GN=meaf6 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Carg11522 vs. TrEMBL
Match: tr|A0A0A0K8N8|A0A0A0K8N8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375790 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 9.6e-69 Identity = 142/157 (90.45%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of Carg11522 vs. TrEMBL
Match: tr|I3SAI9|I3SAI9_MEDTR (Chromatin modification MEAF6-like protein OS=Medicago truncatula OX=3880 GN=25484265 PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.6e-60 Identity = 126/157 (80.25%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of Carg11522 vs. TrEMBL
Match: tr|A0A2I4F6G3|A0A2I4F6G3_9ROSI (chromatin modification-related protein MEAF6-like OS=Juglans regia OX=51240 GN=LOC108995992 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 2.1e-60 Identity = 126/157 (80.25%), Postives = 136/157 (86.62%), Query Frame = 0
BLAST of Carg11522 vs. TrEMBL
Match: tr|A0A1S3VUL8|A0A1S3VUL8_VIGRR (chromatin modification-related protein MEAF6 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106778328 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 4.8e-60 Identity = 127/157 (80.89%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of Carg11522 vs. TrEMBL
Match: tr|A0A0L9TXF6|A0A0L9TXF6_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g137500 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 4.8e-60 Identity = 127/157 (80.89%), Postives = 137/157 (87.26%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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